RNA–Protein interactions for RNA: ENST00000557348.5

SHMT2-229, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,659 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-229ENST00000557348 RGS11O94810 467 aa11.3□□□□□ -0.6
SHMT2-229ENST00000557348 WISP1O95388 367 aa11.3□□□□□ -0.6
SHMT2-229ENST00000557348 ABHD16AO95870 558 aa11.3□□□□□ -0.6
SHMT2-229ENST00000557348 CTLA4P16410 223 aa11.3□□□□□ -0.6
SHMT2-229ENST00000557348 ZNF43P17038 809 aa11.3□□□□□ -0.6
SHMT2-229ENST00000557348 ZNF81P51508 661 aa11.3□□□□□ -0.6
SHMT2-229ENST00000557348 B2MP61769 119 aa11.3□□□□□ -0.6
SHMT2-229ENST00000557348 ADAM8P78325 824 aa11.3□□□□□ -0.6
SHMT2-229ENST00000557348 Q0VFX4 171 aa11.3□□□□□ -0.6
SHMT2-229ENST00000557348 MELKQ14680 651 aa11.3□□□□□ -0.6
SHMT2-229ENST00000557348 POU4F3Q15319 338 aa11.3□□□□□ -0.6
SHMT2-229ENST00000557348 GSG1Q2KHT4 349 aa11.3□□□□□ -0.6
SHMT2-229ENST00000557348 TMEM176BQ3YBM2 270 aaPredicted RBP11.3□□□□□ -0.6
SHMT2-229ENST00000557348 ELFN2Q5R3F8 820 aa11.3□□□□□ -0.6
SHMT2-229ENST00000557348 STPG1Q5TH74 334 aa11.3□□□□□ -0.6
SHMT2-229ENST00000557348 LIPNQ5VXI9 398 aa11.3□□□□□ -0.6
SHMT2-229ENST00000557348 UNQ9370/PRO34162Q6UXP9 181 aa11.3□□□□□ -0.6
SHMT2-229ENST00000557348 RPTNQ6XPR3 784 aa11.3□□□□□ -0.6
SHMT2-229ENST00000557348 ASB18Q6ZVZ8 466 aa11.3□□□□□ -0.6
SHMT2-229ENST00000557348 GLB1L2Q8IW92 636 aa11.3□□□□□ -0.6
SHMT2-229ENST00000557348 RFLNBQ8N5W9 214 aa11.3□□□□□ -0.6
SHMT2-229ENST00000557348 NOXO1Q8NFA2 376 aa11.3□□□□□ -0.6
SHMT2-229ENST00000557348 OR5AK2Q8NH90 309 aa11.3□□□□□ -0.6
SHMT2-229ENST00000557348 THEM6Q8WUY1 208 aa11.3□□□□□ -0.6
SHMT2-229ENST00000557348 SLC25A44Q96H78 314 aaPredicted RBP11.3□□□□□ -0.6
SHMT2-229ENST00000557348 THOC3Q96J01 351 aaKnown RBP11.3□□□□□ -0.6
SHMT2-229ENST00000557348 OR8B4Q96RC9 309 aa11.3□□□□□ -0.6
SHMT2-229ENST00000557348 NPAS1Q99742 590 aa11.3□□□□□ -0.6
SHMT2-229ENST00000557348 SLITRK2Q9H156 845 aa11.3□□□□□ -0.6
SHMT2-229ENST00000557348 PROK2Q9HC23 129 aa11.3□□□□□ -0.6
SHMT2-229ENST00000557348 MRM2Q9UI43 246 aaKnown RBP11.3□□□□□ -0.6
SHMT2-229ENST00000557348 BOKQ9UMX3 212 aaPredicted RBP11.3□□□□□ -0.6
SHMT2-229ENST00000557348 HRH3Q9Y5N1 445 aa11.3□□□□□ -0.6
SHMT2-229ENST00000557348 A0A1W2PNU3 283 aaPredicted RBP11.29□□□□□ -0.6
SHMT2-229ENST00000557348 TVP23AA6NH52 213 aa11.29□□□□□ -0.6
SHMT2-229ENST00000557348 ATP6V1G2-DDX39BF2Z307 99 aa11.29□□□□□ -0.6
SHMT2-229ENST00000557348 LRRTM2O43300 516 aa11.29□□□□□ -0.6
SHMT2-229ENST00000557348 UPK3AO75631 287 aa11.29□□□□□ -0.6
SHMT2-229ENST00000557348 GIPP09681 153 aaPredicted RBP11.29□□□□□ -0.6
SHMT2-229ENST00000557348 H2AFB2P0C5Z0 115 aa11.29□□□□□ -0.6
SHMT2-229ENST00000557348 ELK1P19419 428 aa11.29□□□□□ -0.6
SHMT2-229ENST00000557348 RAB3BP20337 219 aa11.29□□□□□ -0.6
SHMT2-229ENST00000557348 CNR1P21554 472 aa11.29□□□□□ -0.6
SHMT2-229ENST00000557348 CLRN1P58418 232 aa11.29□□□□□ -0.6
SHMT2-229ENST00000557348 RAP2BP61225 183 aa11.29□□□□□ -0.6
SHMT2-229ENST00000557348 MRPS10P82664 201 aaKnown RBP11.29□□□□□ -0.6
SHMT2-229ENST00000557348 ZNF273Q14593 569 aa11.29□□□□□ -0.6
SHMT2-229ENST00000557348 PCK2Q16822 640 aa11.29□□□□□ -0.6
SHMT2-229ENST00000557348 BCL2L15Q5TBC7 163 aa11.29□□□□□ -0.6
SHMT2-229ENST00000557348 SEZ6L2Q6UXD5 910 aa11.29□□□□□ -0.6
SHMT2-229ENST00000557348 TOMM5Q8N4H5 51 aa11.29□□□□□ -0.6
SHMT2-229ENST00000557348 CLEC1AQ8NC01 280 aa11.29□□□□□ -0.6
SHMT2-229ENST00000557348 OR10H5Q8NGA6 315 aa11.29□□□□□ -0.6
SHMT2-229ENST00000557348 ADAMTS17Q8TE56 1095 aa11.29□□□□□ -0.6
SHMT2-229ENST00000557348 GIMAP1Q8WWP7 306 aa11.29□□□□□ -0.6
SHMT2-229ENST00000557348 NSMAFQ92636 917 aa11.29□□□□□ -0.6
SHMT2-229ENST00000557348 JSRP1Q96MG2 331 aaPredicted RBP11.29□□□□□ -0.6
SHMT2-229ENST00000557348 B3GAT1Q9P2W7 334 aa11.29□□□□□ -0.6
SHMT2-229ENST00000557348 B4GALT7Q9UBV7 327 aa11.29□□□□□ -0.6
SHMT2-229ENST00000557348 RALGAPA1Q6GYQ0 2036 aa11.28□□□□□ -0.6
SHMT2-229ENST00000557348 A0A1B0GUH1 482 aa11.28□□□□□ -0.6
SHMT2-229ENST00000557348 OR2M5A3KFT3 312 aa11.28□□□□□ -0.6
SHMT2-229ENST00000557348 PMS2P1A4D2B8 440 aa11.28□□□□□ -0.6
SHMT2-229ENST00000557348 ZNF726A6NNF4 738 aa11.28□□□□□ -0.6
SHMT2-229ENST00000557348 HMSDA8MTL9 139 aa11.28□□□□□ -0.6
SHMT2-229ENST00000557348 SHISA8B8ZZ34 492 aa11.28□□□□□ -0.6
SHMT2-229ENST00000557348 ZIC3O60481 467 aa11.28□□□□□ -0.6
SHMT2-229ENST00000557348 OR8G3PP0DMU2 310 aa11.28□□□□□ -0.6
SHMT2-229ENST00000557348 ZNF250P15622 560 aa11.28□□□□□ -0.6
SHMT2-229ENST00000557348 PRKACAP17612 351 aa11.28□□□□□ -0.6
SHMT2-229ENST00000557348 IL11P20809 199 aa11.28□□□□□ -0.6
SHMT2-229ENST00000557348 BTCP35070 178 aa11.28□□□□□ -0.6
SHMT2-229ENST00000557348 SFTPDP35247 375 aa11.28□□□□□ -0.6
SHMT2-229ENST00000557348 NBL1P41271 181 aa11.28□□□□□ -0.6
SHMT2-229ENST00000557348 P2RY4P51582 365 aa11.28□□□□□ -0.6
SHMT2-229ENST00000557348 AGFG1P52594 562 aaKnown RBP11.28□□□□□ -0.6
SHMT2-229ENST00000557348 RIDAP52758 137 aaKnown RBP11.28□□□□□ -0.6
SHMT2-229ENST00000557348 BIDP55957 195 aa11.28□□□□□ -0.6
SHMT2-229ENST00000557348 INPP5JQ15735 1006 aaPredicted RBP11.28□□□□□ -0.6
SHMT2-229ENST00000557348 Q499Y3 187 aa11.28□□□□□ -0.6
SHMT2-229ENST00000557348 DCAF10Q5QP82 559 aa11.28□□□□□ -0.6
SHMT2-229ENST00000557348 PDSS1Q5T2R2 415 aa11.28□□□□□ -0.6
SHMT2-229ENST00000557348 SFXN4Q6P4A7 337 aa11.28□□□□□ -0.6
SHMT2-229ENST00000557348 IGF2-ASQ6U949 168 aa11.28□□□□□ -0.6
SHMT2-229ENST00000557348 LYPD4Q6UWN0 246 aa11.28□□□□□ -0.6
SHMT2-229ENST00000557348 C3P1Q6ZMU1 363 aa11.28□□□□□ -0.6
SHMT2-229ENST00000557348 RHOUQ7L0Q8 258 aa11.28□□□□□ -0.6
SHMT2-229ENST00000557348 KRT77Q7Z794 578 aa11.28□□□□□ -0.6
SHMT2-229ENST00000557348 LURAP1LQ8IV03 231 aa11.28□□□□□ -0.6
SHMT2-229ENST00000557348 BEST3Q8N1M1 668 aa11.28□□□□□ -0.6
SHMT2-229ENST00000557348 STPG2Q8N412 459 aa11.28□□□□□ -0.6
SHMT2-229ENST00000557348 IL22RA1Q8N6P7 574 aa11.28□□□□□ -0.6
SHMT2-229ENST00000557348 SLC26A10Q8NG04 563 aa11.28□□□□□ -0.6
SHMT2-229ENST00000557348 SMAP2Q8WU79 429 aaPredicted RBP11.28□□□□□ -0.6
SHMT2-229ENST00000557348 PNPLA2Q96AD5 504 aa11.28□□□□□ -0.6
SHMT2-229ENST00000557348 DNAJA3Q96EY1 480 aa11.28□□□□□ -0.6
SHMT2-229ENST00000557348 DCBLD2Q96PD2 775 aa11.28□□□□□ -0.6
SHMT2-229ENST00000557348 DPCDQ9BVM2 203 aaPredicted RBP11.28□□□□□ -0.6
SHMT2-229ENST00000557348 SF3B5Q9BWJ5 86 aaKnown RBP11.28□□□□□ -0.6
SHMT2-229ENST00000557348 CACNG6Q9BXT2 260 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms