RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 KRTAP11-1Q8IUC1 163 aa3.51□□□□□ -1.85
VRK1-205ENST00000555402 LILRB4Q8NHJ6 448 aa3.51□□□□□ -1.85
VRK1-205ENST00000555402 SUN5Q8TC36 379 aa3.51□□□□□ -1.85
VRK1-205ENST00000555402 ISG20Q96AZ6 181 aaKnown RBP3.51□□□□□ -1.85
VRK1-205ENST00000555402 EXOSC8Q96B26 276 aaKnown RBP3.51□□□□□ -1.85
VRK1-205ENST00000555402 ZNF799Q96GE5 643 aa3.51□□□□□ -1.85
VRK1-205ENST00000555402 BMFQ96LC9 184 aa3.51□□□□□ -1.85
VRK1-205ENST00000555402 SLC25A2Q9BXI2 301 aa3.51□□□□□ -1.85
VRK1-205ENST00000555402 SLC25A39Q9BZJ4 359 aaPredicted RBP3.51□□□□□ -1.85
VRK1-205ENST00000555402 LYRM4Q9HD34 91 aa3.51□□□□□ -1.85
VRK1-205ENST00000555402 FAM49BQ9NUQ9 324 aa3.51□□□□□ -1.85
VRK1-205ENST00000555402 MYEF2Q9P2K5 600 aaKnown RBP3.51□□□□□ -1.85
VRK1-205ENST00000555402 UVRAGQ9P2Y5 699 aa3.51□□□□□ -1.85
VRK1-205ENST00000555402 TRMT112Q9UI30 125 aaKnown RBP3.51□□□□□ -1.85
VRK1-205ENST00000555402 WDR62O43379 1518 aa3.5□□□□□ -1.85
VRK1-205ENST00000555402 KCNE1BA0A087WTH5 132 aa3.5□□□□□ -1.85
VRK1-205ENST00000555402 H0YHG0 523 aa3.5□□□□□ -1.85
VRK1-205ENST00000555402 SLC9A3R1O14745 358 aaPredicted RBP3.5□□□□□ -1.85
VRK1-205ENST00000555402 CD160O95971 181 aa3.5□□□□□ -1.85
VRK1-205ENST00000555402 CLTAP09496 248 aa3.5□□□□□ -1.85
VRK1-205ENST00000555402 UBTFL6P0CB48 400 aaPredicted RBP3.5□□□□□ -1.85
VRK1-205ENST00000555402 WARSP23381 471 aaKnown RBP3.5□□□□□ -1.85
VRK1-205ENST00000555402 LONP1P36776 959 aaKnown RBP3.5□□□□□ -1.85
VRK1-205ENST00000555402 HERVK_113P61574 105 aa3.5□□□□□ -1.85
VRK1-205ENST00000555402 GPR107Q5VW38 600 aa3.5□□□□□ -1.85
VRK1-205ENST00000555402 DNAJC24Q6P3W2 148 aa3.5□□□□□ -1.85
VRK1-205ENST00000555402 C12orf54Q6X4T0 127 aa3.5□□□□□ -1.85
VRK1-205ENST00000555402 MRPL55Q7Z7F7 128 aaKnown RBP3.5□□□□□ -1.85
VRK1-205ENST00000555402 PCP2Q8IVA1 136 aa3.5□□□□□ -1.85
VRK1-205ENST00000555402 ZFP90Q8TF47 636 aa3.5□□□□□ -1.85
VRK1-205ENST00000555402 TMEM230Q96A57 120 aa3.5□□□□□ -1.85
VRK1-205ENST00000555402 KIAA1143Q96AT1 154 aaPredicted RBP3.5□□□□□ -1.85
VRK1-205ENST00000555402 JSRP1Q96MG2 331 aaPredicted RBP3.5□□□□□ -1.85
VRK1-205ENST00000555402 WFIKKN1Q96NZ8 548 aa3.5□□□□□ -1.85
VRK1-205ENST00000555402 PAIP2Q9BPZ3 127 aaKnown RBP3.5□□□□□ -1.85
VRK1-205ENST00000555402 PLA2G2FQ9BZM2 168 aa3.5□□□□□ -1.85
VRK1-205ENST00000555402 PIGUQ9H490 435 aa3.5□□□□□ -1.85
VRK1-205ENST00000555402 AGPAT3Q9NRZ7 376 aa3.5□□□□□ -1.85
VRK1-205ENST00000555402 ATRXP46100 2492 aa3.5□□□□□ -1.85
VRK1-205ENST00000555402 PRRC2AP48634 2157 aaKnown RBP3.49□□□□□ -1.85
VRK1-205ENST00000555402 LOC100506127A0A0U1RQW1 187 aa3.49□□□□□ -1.85
VRK1-205ENST00000555402 ZNF879B4DU55 563 aa3.49□□□□□ -1.85
VRK1-205ENST00000555402 INS-IGF2F8WCM5 200 aa3.49□□□□□ -1.85
VRK1-205ENST00000555402 FCN3O75636 299 aa3.49□□□□□ -1.85
VRK1-205ENST00000555402 CSTAP01040 98 aa3.49□□□□□ -1.85
VRK1-205ENST00000555402 HLA-HP01893 362 aa3.49□□□□□ -1.85
VRK1-205ENST00000555402 IFNW1P05000 195 aa3.49□□□□□ -1.85
VRK1-205ENST00000555402 CT45A6P0DMU7 189 aa3.49□□□□□ -1.85
VRK1-205ENST00000555402 CT45A5P0DMU8 189 aa3.49□□□□□ -1.85
VRK1-205ENST00000555402 CT45A7P0DMV0 189 aa3.49□□□□□ -1.85
VRK1-205ENST00000555402 UBE2MP61081 183 aaKnown RBP3.49□□□□□ -1.85
VRK1-205ENST00000555402 IRF8Q02556 426 aa3.49□□□□□ -1.85
VRK1-205ENST00000555402 RGNQ15493 299 aa3.49□□□□□ -1.85
VRK1-205ENST00000555402 Q3ZCU0 254 aa3.49□□□□□ -1.85
VRK1-205ENST00000555402 CT45A1Q5HYN5 189 aa3.49□□□□□ -1.85
VRK1-205ENST00000555402 STUMQ69YW2 141 aa3.49□□□□□ -1.85
VRK1-205ENST00000555402 IGFL2Q6UWQ7 119 aa3.49□□□□□ -1.85
VRK1-205ENST00000555402 PRSS58Q8IYP2 241 aa3.49□□□□□ -1.85
VRK1-205ENST00000555402 OR10G4Q8NGN3 311 aa3.49□□□□□ -1.85
VRK1-205ENST00000555402 CT45A3Q8NHU0 189 aa3.49□□□□□ -1.85
VRK1-205ENST00000555402 LRRC29Q8WV35 223 aa3.49□□□□□ -1.85
VRK1-205ENST00000555402 APH1BQ8WW43 257 aa3.49□□□□□ -1.85
VRK1-205ENST00000555402 TMIGD2Q96BF3 282 aa3.49□□□□□ -1.85
VRK1-205ENST00000555402 ATP6V1G3Q96LB4 118 aa3.49□□□□□ -1.85
VRK1-205ENST00000555402 ANKRD60Q9BZ19 345 aa3.49□□□□□ -1.85
VRK1-205ENST00000555402 NTN4Q9HB63 628 aa3.49□□□□□ -1.85
VRK1-205ENST00000555402 MRM3Q9HC36 420 aaKnown RBP3.49□□□□□ -1.85
VRK1-205ENST00000555402 ISYNA1Q9NPH2 558 aa3.49□□□□□ -1.85
VRK1-205ENST00000555402 OR12D3Q9UGF7 316 aa3.49□□□□□ -1.85
VRK1-205ENST00000555402 PSG8Q9UQ74 426 aa3.49□□□□□ -1.85
VRK1-205ENST00000555402 SAR1BQ9Y6B6 198 aa3.49□□□□□ -1.85
VRK1-205ENST00000555402 KCNE3Q9Y6H6 103 aa3.49□□□□□ -1.85
VRK1-205ENST00000555402 CDC42BPBQ9Y5S2 1711 aa3.49□□□□□ -1.85
VRK1-205ENST00000555402 ZNFX1Q9P2E3 1918 aaKnown RBP3.48□□□□□ -1.85
VRK1-205ENST00000555402 MAP3K19Q56UN5 1328 aa3.48□□□□□ -1.85
VRK1-205ENST00000555402 LOC100653049A0A140TA62 436 aa3.48□□□□□ -1.85
VRK1-205ENST00000555402 RAD51CO43502 376 aa3.48□□□□□ -1.85
VRK1-205ENST00000555402 KRT34O76011 436 aa3.48□□□□□ -1.85
VRK1-205ENST00000555402 HBE1P02100 147 aa3.48□□□□□ -1.85
VRK1-205ENST00000555402 HLA-DPB1P04440 258 aa3.48□□□□□ -1.85
VRK1-205ENST00000555402 EIF4EP06730 217 aaKnown RBP3.48□□□□□ -1.85
VRK1-205ENST00000555402 IVLP07476 585 aa3.48□□□□□ -1.85
VRK1-205ENST00000555402 CSNK1A1P48729 337 aa3.48□□□□□ -1.85
VRK1-205ENST00000555402 CLDN8P56748 225 aa3.48□□□□□ -1.85
VRK1-205ENST00000555402 RAD51Q06609 339 aa3.48□□□□□ -1.85
VRK1-205ENST00000555402 TRDNQ13061 729 aa3.48□□□□□ -1.85
VRK1-205ENST00000555402 ERCC8Q13216 396 aa3.48□□□□□ -1.85
VRK1-205ENST00000555402 CAPRIN1Q14444 709 aaKnown RBP3.48□□□□□ -1.85
VRK1-205ENST00000555402 QPRTQ15274 297 aa3.48□□□□□ -1.85
VRK1-205ENST00000555402 TPTE2P1Q5T6R2 138 aa3.48□□□□□ -1.85
VRK1-205ENST00000555402 TSPO2Q5TGU0 170 aa3.48□□□□□ -1.85
VRK1-205ENST00000555402 UBE2UQ5VVX9 321 aa3.48□□□□□ -1.85
VRK1-205ENST00000555402 ARL9Q6T311 187 aa3.48□□□□□ -1.85
VRK1-205ENST00000555402 PLET1Q6UQ28 207 aa3.48□□□□□ -1.85
VRK1-205ENST00000555402 TIFABQ6ZNK6 161 aa3.48□□□□□ -1.85
VRK1-205ENST00000555402 LINC01551Q86U37 167 aa3.48□□□□□ -1.85
VRK1-205ENST00000555402 ZNF786Q8N393 782 aa3.48□□□□□ -1.85
VRK1-205ENST00000555402 Q8N976 141 aa3.48□□□□□ -1.85
VRK1-205ENST00000555402 OR52E5Q8NH55 327 aa3.48□□□□□ -1.85
VRK1-205ENST00000555402 GPX8Q8TED1 209 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms