RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 ASH2LQ9UBL3 628 aa10.08□□□□□ -0.8
VRK1-204ENST00000555351 TMEFF2Q9UIK5 374 aaPredicted RBP10.08□□□□□ -0.8
VRK1-204ENST00000555351 COA3Q9Y2R0 106 aaPredicted RBP10.08□□□□□ -0.8
VRK1-204ENST00000555351 ATRQ13535 2644 aa10.08□□□□□ -0.8
VRK1-204ENST00000555351 MALRD1Q5VYJ5 2156 aa10.08□□□□□ -0.8
VRK1-204ENST00000555351 IGLV1-36A0A0B4J1U3 117 aa10.07□□□□□ -0.8
VRK1-204ENST00000555351 B2RBV5 119 aa10.07□□□□□ -0.8
VRK1-204ENST00000555351 CLDN25C9JDP6 229 aa10.07□□□□□ -0.8
VRK1-204ENST00000555351 PPIHO43447 177 aaKnown RBP10.07□□□□□ -0.8
VRK1-204ENST00000555351 RENP00797 406 aa10.07□□□□□ -0.8
VRK1-204ENST00000555351 IGHV1-46P01743 117 aa10.07□□□□□ -0.8
VRK1-204ENST00000555351 KITLGP21583 273 aa10.07□□□□□ -0.8
VRK1-204ENST00000555351 CALB2P22676 271 aa10.07□□□□□ -0.8
VRK1-204ENST00000555351 RRM2P31350 389 aa10.07□□□□□ -0.8
VRK1-204ENST00000555351 MSX2P35548 267 aaPredicted RBP10.07□□□□□ -0.8
VRK1-204ENST00000555351 LMO4P61968 165 aa10.07□□□□□ -0.8
VRK1-204ENST00000555351 COX10Q12887 443 aa10.07□□□□□ -0.8
VRK1-204ENST00000555351 PSG7Q13046 419 aa10.07□□□□□ -0.8
VRK1-204ENST00000555351 CDK5R2Q13319 367 aa10.07□□□□□ -0.8
VRK1-204ENST00000555351 TRIM25Q14258 630 aaKnown RBP10.07□□□□□ -0.8
VRK1-204ENST00000555351 GK3PQ14409 553 aa10.07□□□□□ -0.8
VRK1-204ENST00000555351 CR1LQ2VPA4 569 aa10.07□□□□□ -0.8
VRK1-204ENST00000555351 SLC36A3Q495N2 470 aa10.07□□□□□ -0.8
VRK1-204ENST00000555351 LCN8Q6JVE9 175 aa10.07□□□□□ -0.8
VRK1-204ENST00000555351 ZNF620Q6ZNG0 422 aa10.07□□□□□ -0.8
VRK1-204ENST00000555351 USP51Q70EK9 711 aa10.07□□□□□ -0.8
VRK1-204ENST00000555351 GLCCI1Q86VQ1 547 aa10.07□□□□□ -0.8
VRK1-204ENST00000555351 TEX29Q8N6K0 151 aa10.07□□□□□ -0.8
VRK1-204ENST00000555351 OR5L1Q8NGL2 311 aa10.07□□□□□ -0.8
VRK1-204ENST00000555351 OR1F12Q8NHA8 337 aa10.07□□□□□ -0.8
VRK1-204ENST00000555351 RAB1CQ92928 201 aa10.07□□□□□ -0.8
VRK1-204ENST00000555351 HAVCR1Q96D42 359 aa10.07□□□□□ -0.8
VRK1-204ENST00000555351 RAB39BQ96DA2 213 aa10.07□□□□□ -0.8
VRK1-204ENST00000555351 TIMD4Q96H15 378 aa10.07□□□□□ -0.8
VRK1-204ENST00000555351 COQ7Q99807 217 aa10.07□□□□□ -0.8
VRK1-204ENST00000555351 C1orf21Q9H246 121 aa10.07□□□□□ -0.8
VRK1-204ENST00000555351 IL20Q9NYY1 176 aa10.07□□□□□ -0.8
VRK1-204ENST00000555351 KCNG2Q9UJ96 466 aa10.07□□□□□ -0.8
VRK1-204ENST00000555351 PRPF19Q9UMS4 504 aaKnown RBP10.07□□□□□ -0.8
VRK1-204ENST00000555351 LYVE1Q9Y5Y7 322 aa10.07□□□□□ -0.8
VRK1-204ENST00000555351 V9GYQ6 96 aa10.07□□□□□ -0.8
VRK1-204ENST00000555351 TRAV20A0A0B4J274 112 aa10.06□□□□□ -0.8
VRK1-204ENST00000555351 ZSCAN5BA6NJL1 495 aa10.06□□□□□ -0.8
VRK1-204ENST00000555351 DYNC1I1O14576 645 aa10.06□□□□□ -0.8
VRK1-204ENST00000555351 TPD52L2O43399 206 aaKnown RBP10.06□□□□□ -0.8
VRK1-204ENST00000555351 PPP1R3DO95685 299 aa10.06□□□□□ -0.8
VRK1-204ENST00000555351 MSMBP08118 114 aa10.06□□□□□ -0.8
VRK1-204ENST00000555351 GAAP10253 952 aa10.06□□□□□ -0.8
VRK1-204ENST00000555351 RAC2P15153 192 aa10.06□□□□□ -0.8
VRK1-204ENST00000555351 ECH1Q13011 328 aa10.06□□□□□ -0.8
VRK1-204ENST00000555351 ALKBH6Q3KRA9 238 aa10.06□□□□□ -0.8
VRK1-204ENST00000555351 CCDC92Q53HC0 331 aaPredicted RBP10.06□□□□□ -0.8
VRK1-204ENST00000555351 TMEM255AQ5JRV8 349 aa10.06□□□□□ -0.8
VRK1-204ENST00000555351 SPATA46Q5T0L3 261 aa10.06□□□□□ -0.8
VRK1-204ENST00000555351 PGBD2Q6P3X8 592 aa10.06□□□□□ -0.8
VRK1-204ENST00000555351 FBXW12Q6X9E4 464 aa10.06□□□□□ -0.8
VRK1-204ENST00000555351 JAZF1Q86VZ6 243 aa10.06□□□□□ -0.8
VRK1-204ENST00000555351 SLC26A10Q8NG04 563 aa10.06□□□□□ -0.8
VRK1-204ENST00000555351 OR51F2Q8NH61 342 aa10.06□□□□□ -0.8
VRK1-204ENST00000555351 PTP4A1Q93096 173 aa10.06□□□□□ -0.8
VRK1-204ENST00000555351 APOBEC3DQ96AK3 386 aaPredicted RBP10.06□□□□□ -0.8
VRK1-204ENST00000555351 IFT27Q9BW83 186 aa10.06□□□□□ -0.8
VRK1-204ENST00000555351 IL20RAQ9UHF4 553 aa10.06□□□□□ -0.8
VRK1-204ENST00000555351 B9D1Q9UPM9 204 aa10.06□□□□□ -0.8
VRK1-204ENST00000555351 CDH10Q9Y6N8 788 aa10.06□□□□□ -0.8
VRK1-204ENST00000555351 FBN1P35555 2871 aaKnown RBP10.06□□□□□ -0.8
VRK1-204ENST00000555351 COL6A5A8TX70 2615 aa10.05□□□□□ -0.8
VRK1-204ENST00000555351 TCRBV5S2A0A599 114 aa10.05□□□□□ -0.8
VRK1-204ENST00000555351 IFNL4K9M1U5 179 aa10.05□□□□□ -0.8
VRK1-204ENST00000555351 DCTN6O00399 190 aa10.05□□□□□ -0.8
VRK1-204ENST00000555351 SURF4O15260 269 aa10.05□□□□□ -0.8
VRK1-204ENST00000555351 PHF1O43189 567 aaPredicted RBP10.05□□□□□ -0.8
VRK1-204ENST00000555351 SPRY3O43610 288 aa10.05□□□□□ -0.8
VRK1-204ENST00000555351 TIMM8AO60220 97 aaPredicted RBP10.05□□□□□ -0.8
VRK1-204ENST00000555351 CDC14BO60729 498 aa10.05□□□□□ -0.8
VRK1-204ENST00000555351 UBOX5O94941 541 aa10.05□□□□□ -0.8
VRK1-204ENST00000555351 HIST1H1CP16403 213 aaKnown RBP10.05□□□□□ -0.8
VRK1-204ENST00000555351 TNFRSF1AP19438 455 aa10.05□□□□□ -0.8
VRK1-204ENST00000555351 TNFSF4P23510 183 aa10.05□□□□□ -0.8
VRK1-204ENST00000555351 NOS3P29474 1203 aa10.05□□□□□ -0.8
VRK1-204ENST00000555351 SCGB2A2Q13296 93 aa10.05□□□□□ -0.8
VRK1-204ENST00000555351 CCNIQ14094 377 aa10.05□□□□□ -0.8
VRK1-204ENST00000555351 TSTQ16762 297 aaKnown RBP10.05□□□□□ -0.8
VRK1-204ENST00000555351 ZNF770Q6IQ21 691 aaPredicted RBP10.05□□□□□ -0.8
VRK1-204ENST00000555351 ACSM5Q6NUN0 579 aa10.05□□□□□ -0.8
VRK1-204ENST00000555351 LEG1Q6P5S2 330 aa10.05□□□□□ -0.8
VRK1-204ENST00000555351 COLCA1Q6ZS62 124 aa10.05□□□□□ -0.8
VRK1-204ENST00000555351 DHFR2Q86XF0 187 aa10.05□□□□□ -0.8
VRK1-204ENST00000555351 OR6V1Q8N148 313 aa10.05□□□□□ -0.8
VRK1-204ENST00000555351 RFLNBQ8N5W9 214 aa10.05□□□□□ -0.8
VRK1-204ENST00000555351 CCDC197Q8NCU1 140 aa10.05□□□□□ -0.8
VRK1-204ENST00000555351 OR52L1Q8NGH7 329 aa10.05□□□□□ -0.8
VRK1-204ENST00000555351 TMEM186Q96B77 213 aa10.05□□□□□ -0.8
VRK1-204ENST00000555351 SAMD8Q96LT4 415 aa10.05□□□□□ -0.8
VRK1-204ENST00000555351 NMNAT3Q96T66 252 aa10.05□□□□□ -0.8
VRK1-204ENST00000555351 RERGLQ9H628 205 aa10.05□□□□□ -0.8
VRK1-204ENST00000555351 IL19Q9UHD0 177 aa10.05□□□□□ -0.8
VRK1-204ENST00000555351 PURGQ9UJV8 347 aaKnown RBP10.05□□□□□ -0.8
VRK1-204ENST00000555351 BAIAP2Q9UQB8 552 aa10.05□□□□□ -0.8
VRK1-204ENST00000555351 POLR1DQ9Y2S0 133 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms