RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 SLC41A2Q96JW4 573 aa9.62□□□□□ -0.87
MTHFD1-210ENST00000555252 SPACA7Q96KW9 195 aa9.62□□□□□ -0.87
MTHFD1-210ENST00000555252 C4orf45Q96LM5 186 aa9.62□□□□□ -0.87
MTHFD1-210ENST00000555252 FKRPQ9H9S5 495 aa9.62□□□□□ -0.87
MTHFD1-210ENST00000555252 TREM1Q9NP99 234 aa9.62□□□□□ -0.87
MTHFD1-210ENST00000555252 GSN-AS1Q9NRJ2 163 aa9.62□□□□□ -0.87
MTHFD1-210ENST00000555252 RCC2Q9P258 522 aaKnown RBP9.62□□□□□ -0.87
MTHFD1-210ENST00000555252 METTL1Q9UBP6 276 aaKnown RBP9.62□□□□□ -0.87
MTHFD1-210ENST00000555252 LAMP5Q9UJQ1 280 aa9.62□□□□□ -0.87
MTHFD1-210ENST00000555252 WIF1Q9Y5W5 379 aa9.62□□□□□ -0.87
MTHFD1-210ENST00000555252 HEATR5AQ86XA9 2040 aa9.62□□□□□ -0.87
MTHFD1-210ENST00000555252 A0A1B0GVT2 93 aa9.62□□□□□ -0.87
MTHFD1-210ENST00000555252 A0A1W2PPC4 97 aa9.62□□□□□ -0.87
MTHFD1-210ENST00000555252 C9orf170A2RU37 121 aa9.62□□□□□ -0.87
MTHFD1-210ENST00000555252 LILRA5A6NI73 299 aa9.62□□□□□ -0.87
MTHFD1-210ENST00000555252 COLCA2A8K830 154 aa9.62□□□□□ -0.87
MTHFD1-210ENST00000555252 LINC00587B1AMM8 73 aa9.62□□□□□ -0.87
MTHFD1-210ENST00000555252 B4DGG1 531 aa9.62□□□□□ -0.87
MTHFD1-210ENST00000555252 H0YIG0 161 aa9.62□□□□□ -0.87
MTHFD1-210ENST00000555252 EIF1BO60739 113 aaKnown RBP9.62□□□□□ -0.87
MTHFD1-210ENST00000555252 LYL1P12980 280 aa9.62□□□□□ -0.87
MTHFD1-210ENST00000555252 ALOX5APP20292 161 aa9.62□□□□□ -0.87
MTHFD1-210ENST00000555252 RAB6AP20340 208 aa9.62□□□□□ -0.87
MTHFD1-210ENST00000555252 PSMB6P28072 239 aa9.62□□□□□ -0.87
MTHFD1-210ENST00000555252 EIF1P41567 113 aaKnown RBP9.62□□□□□ -0.87
MTHFD1-210ENST00000555252 PTGFRP43088 359 aa9.62□□□□□ -0.87
MTHFD1-210ENST00000555252 GRK6P43250 576 aa9.62□□□□□ -0.87
MTHFD1-210ENST00000555252 FASLGP48023 281 aa9.62□□□□□ -0.87
MTHFD1-210ENST00000555252 CAV2P51636 162 aa9.62□□□□□ -0.87
MTHFD1-210ENST00000555252 C1orf61Q13536 156 aa9.62□□□□□ -0.87
MTHFD1-210ENST00000555252 KLHL26Q53HC5 615 aa9.62□□□□□ -0.87
MTHFD1-210ENST00000555252 IGSF11Q5DX21 431 aa9.62□□□□□ -0.87
MTHFD1-210ENST00000555252 ZNF704Q6ZNC4 412 aaPredicted RBP9.62□□□□□ -0.87
MTHFD1-210ENST00000555252 TMEM200AQ86VY9 491 aa9.62□□□□□ -0.87
MTHFD1-210ENST00000555252 SFTPA2Q8IWL1 248 aa9.62□□□□□ -0.87
MTHFD1-210ENST00000555252 ZNF615Q8N8J6 731 aa9.62□□□□□ -0.87
MTHFD1-210ENST00000555252 OR4A4PQ8NGN8 299 aa9.62□□□□□ -0.87
MTHFD1-210ENST00000555252 C16orf52Q8NHV5 167 aa9.62□□□□□ -0.87
MTHFD1-210ENST00000555252 PAQR8Q8TEZ7 354 aa9.62□□□□□ -0.87
MTHFD1-210ENST00000555252 RASD2Q96D21 266 aa9.62□□□□□ -0.87
MTHFD1-210ENST00000555252 SMIM8Q96KF7 97 aa9.62□□□□□ -0.87
MTHFD1-210ENST00000555252 CHRNA10Q9GZZ6 450 aa9.62□□□□□ -0.87
MTHFD1-210ENST00000555252 TUBA4BQ9H853 241 aa9.62□□□□□ -0.87
MTHFD1-210ENST00000555252 ACKR4Q9NPB9 350 aa9.62□□□□□ -0.87
MTHFD1-210ENST00000555252 ASH2LQ9UBL3 628 aa9.62□□□□□ -0.87
MTHFD1-210ENST00000555252 LPAR3Q9UBY5 353 aa9.62□□□□□ -0.87
MTHFD1-210ENST00000555252 CYP8B1Q9UNU6 501 aa9.62□□□□□ -0.87
MTHFD1-210ENST00000555252 METTL21EPA6NDL7 271 aa9.61□□□□□ -0.87
MTHFD1-210ENST00000555252 DBX1A6NMT0 343 aa9.61□□□□□ -0.87
MTHFD1-210ENST00000555252 DUS4LO95620 317 aaKnown RBP9.61□□□□□ -0.87
MTHFD1-210ENST00000555252 MAOAP21397 527 aa9.61□□□□□ -0.87
MTHFD1-210ENST00000555252 CAPZBP47756 277 aa9.61□□□□□ -0.87
MTHFD1-210ENST00000555252 CENPAP49450 140 aa9.61□□□□□ -0.87
MTHFD1-210ENST00000555252 DMWDQ09019 674 aa9.61□□□□□ -0.87
MTHFD1-210ENST00000555252 HABP2Q14520 560 aaPredicted RBP9.61□□□□□ -0.87
MTHFD1-210ENST00000555252 SMCO1Q147U7 214 aa9.61□□□□□ -0.87
MTHFD1-210ENST00000555252 PAPD4Q6PIY7 484 aaKnown RBP9.61□□□□□ -0.87
MTHFD1-210ENST00000555252 ADGRE4PQ86SQ3 457 aa9.61□□□□□ -0.87
MTHFD1-210ENST00000555252 BIVMQ86UB2 503 aa9.61□□□□□ -0.87
MTHFD1-210ENST00000555252 ZNF584Q8IVC4 421 aa9.61□□□□□ -0.87
MTHFD1-210ENST00000555252 ZNF561Q8N587 486 aa9.61□□□□□ -0.87
MTHFD1-210ENST00000555252 ZPLD1Q8TCW7 415 aa9.61□□□□□ -0.87
MTHFD1-210ENST00000555252 NUDCD2Q8WVJ2 157 aa9.61□□□□□ -0.87
MTHFD1-210ENST00000555252 TSEN15Q8WW01 171 aaKnown RBP9.61□□□□□ -0.87
MTHFD1-210ENST00000555252 ASB17Q8WXJ9 295 aa9.61□□□□□ -0.87
MTHFD1-210ENST00000555252 C3orf49Q96BT1 292 aa9.61□□□□□ -0.87
MTHFD1-210ENST00000555252 CRB3Q9BUF7 120 aa9.61□□□□□ -0.87
MTHFD1-210ENST00000555252 LRRC61Q9BV99 259 aa9.61□□□□□ -0.87
MTHFD1-210ENST00000555252 TINAGL1Q9GZM7 467 aaPredicted RBP9.61□□□□□ -0.87
MTHFD1-210ENST00000555252 SEC61A2Q9H9S3 476 aa9.61□□□□□ -0.87
MTHFD1-210ENST00000555252 CHMP1AQ9HD42 196 aaPredicted RBP9.61□□□□□ -0.87
MTHFD1-210ENST00000555252 UBQLN4Q9NRR5 601 aa9.61□□□□□ -0.87
MTHFD1-210ENST00000555252 WSB2Q9NYS7 404 aaPredicted RBP9.61□□□□□ -0.87
MTHFD1-210ENST00000555252 LRIT1Q9P2V4 623 aa9.61□□□□□ -0.87
MTHFD1-210ENST00000555252 CKLFQ9UBR5 152 aa9.61□□□□□ -0.87
MTHFD1-210ENST00000555252 IKZF2Q9UKS7 526 aa9.61□□□□□ -0.87
MTHFD1-210ENST00000555252 DTX4Q9Y2E6 619 aa9.61□□□□□ -0.87
MTHFD1-210ENST00000555252 KLHDC2Q9Y2U9 406 aa9.61□□□□□ -0.87
MTHFD1-210ENST00000555252 CLDN16Q9Y5I7 305 aa9.61□□□□□ -0.87
MTHFD1-210ENST00000555252 ATG2BQ96BY7 2078 aa9.61□□□□□ -0.87
MTHFD1-210ENST00000555252 SZT2Q5T011 3432 aa9.6□□□□□ -0.87
MTHFD1-210ENST00000555252 A0A0B4J2A0 478 aa9.6□□□□□ -0.87
MTHFD1-210ENST00000555252 ELOA3DA6NLF2 546 aaPredicted RBP9.6□□□□□ -0.87
MTHFD1-210ENST00000555252 OR6C76A6NM76 312 aa9.6□□□□□ -0.87
MTHFD1-210ENST00000555252 HRKO00198 91 aa9.6□□□□□ -0.87
MTHFD1-210ENST00000555252 PSMD9O00233 223 aa9.6□□□□□ -0.87
MTHFD1-210ENST00000555252 WRBO00258 174 aa9.6□□□□□ -0.87
MTHFD1-210ENST00000555252 MFNGO00587 321 aa9.6□□□□□ -0.87
MTHFD1-210ENST00000555252 LDLRAD4O15165 306 aa9.6□□□□□ -0.87
MTHFD1-210ENST00000555252 SCGNO76038 276 aa9.6□□□□□ -0.87
MTHFD1-210ENST00000555252 CTSBP07858 339 aa9.6□□□□□ -0.87
MTHFD1-210ENST00000555252 ZNF806P0C7X5 589 aa9.6□□□□□ -0.87
MTHFD1-210ENST00000555252 FAM157CP0CG43 387 aa9.6□□□□□ -0.87
MTHFD1-210ENST00000555252 HTR2CP28335 458 aa9.6□□□□□ -0.87
MTHFD1-210ENST00000555252 GRPRP30550 384 aa9.6□□□□□ -0.87
MTHFD1-210ENST00000555252 CDKN2AP42771 156 aaKnown RBP9.6□□□□□ -0.87
MTHFD1-210ENST00000555252 ADAM8P78325 824 aa9.6□□□□□ -0.87
MTHFD1-210ENST00000555252 IL13RA1P78552 427 aa9.6□□□□□ -0.87
MTHFD1-210ENST00000555252 ELOA3BQ3SY89 546 aa9.6□□□□□ -0.87
MTHFD1-210ENST00000555252 PLEKHN1Q494U1 663 aaPredicted RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms