RNA–Protein interactions for RNA: ENST00000555046.1

TMEM260-206, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-206ENST00000555046 ZNF584Q8IVC4 421 aa9.16□□□□□ -0.94
TMEM260-206ENST00000555046 IQCF1Q8N6M8 205 aa9.16□□□□□ -0.94
TMEM260-206ENST00000555046 CPEB3Q8NE35 698 aaKnown RBP9.16□□□□□ -0.94
TMEM260-206ENST00000555046 OR6K6Q8NGW6 343 aa9.16□□□□□ -0.94
TMEM260-206ENST00000555046 OR1F12Q8NHA8 337 aa9.16□□□□□ -0.94
TMEM260-206ENST00000555046 AKR7LQ8NHP1 331 aa9.16□□□□□ -0.94
TMEM260-206ENST00000555046 POM121L2Q96KW2 1035 aa9.16□□□□□ -0.94
TMEM260-206ENST00000555046 C4orf45Q96LM5 186 aa9.16□□□□□ -0.94
TMEM260-206ENST00000555046 PITX2Q99697 317 aa9.16□□□□□ -0.94
TMEM260-206ENST00000555046 CIB1Q99828 191 aa9.16□□□□□ -0.94
TMEM260-206ENST00000555046 HDHD2Q9H0R4 259 aa9.16□□□□□ -0.94
TMEM260-206ENST00000555046 WNT5BQ9H1J7 359 aa9.16□□□□□ -0.94
TMEM260-206ENST00000555046 OR51V1Q9H2C8 321 aa9.16□□□□□ -0.94
TMEM260-206ENST00000555046 PLK3Q9H4B4 646 aa9.16□□□□□ -0.94
TMEM260-206ENST00000555046 BARX1Q9HBU1 254 aaPredicted RBP9.16□□□□□ -0.94
TMEM260-206ENST00000555046 ASH2LQ9UBL3 628 aa9.16□□□□□ -0.94
TMEM260-206ENST00000555046 CYB5R1Q9UHQ9 305 aa9.16□□□□□ -0.94
TMEM260-206ENST00000555046 TGP01266 2768 aa9.16□□□□□ -0.94
TMEM260-206ENST00000555046 SNTNA6NMZ2 147 aa9.15□□□□□ -0.94
TMEM260-206ENST00000555046 ZAR1LA6NP61 321 aa9.15□□□□□ -0.94
TMEM260-206ENST00000555046 TLX2O43763 284 aaPredicted RBP9.15□□□□□ -0.94
TMEM260-206ENST00000555046 DOK2O60496 412 aa9.15□□□□□ -0.94
TMEM260-206ENST00000555046 APOC1P02654 83 aa9.15□□□□□ -0.94
TMEM260-206ENST00000555046 TFP02787 698 aa9.15□□□□□ -0.94
TMEM260-206ENST00000555046 MT-ND5P03915 603 aa9.15□□□□□ -0.94
TMEM260-206ENST00000555046 ALPLP05186 524 aa9.15□□□□□ -0.94
TMEM260-206ENST00000555046 SCG5P05408 212 aa9.15□□□□□ -0.94
TMEM260-206ENST00000555046 LCKP06239 509 aa9.15□□□□□ -0.94
TMEM260-206ENST00000555046 APEX1P27695 318 aaKnown RBP9.15□□□□□ -0.94
TMEM260-206ENST00000555046 GSTT1P30711 240 aa9.15□□□□□ -0.94
TMEM260-206ENST00000555046 GCH1P30793 250 aa9.15□□□□□ -0.94
TMEM260-206ENST00000555046 PYCR1P32322 319 aa9.15□□□□□ -0.94
TMEM260-206ENST00000555046 THBS4P35443 961 aa9.15□□□□□ -0.94
TMEM260-206ENST00000555046 ENTPD1P49961 510 aa9.15□□□□□ -0.94
TMEM260-206ENST00000555046 RPS7P62081 194 aaKnown RBP9.15□□□□□ -0.94
TMEM260-206ENST00000555046 NKX6-1P78426 367 aaPredicted RBP9.15□□□□□ -0.94
TMEM260-206ENST00000555046 HGFACQ04756 655 aa9.15□□□□□ -0.94
TMEM260-206ENST00000555046 SPOCK1Q08629 439 aa9.15□□□□□ -0.94
TMEM260-206ENST00000555046 SNTB2Q13425 540 aaKnown RBP9.15□□□□□ -0.94
TMEM260-206ENST00000555046 TAF13Q15543 124 aa9.15□□□□□ -0.94
TMEM260-206ENST00000555046 ZNF718Q3SXZ3 478 aa9.15□□□□□ -0.94
TMEM260-206ENST00000555046 KLHL12Q53G59 568 aa9.15□□□□□ -0.94
TMEM260-206ENST00000555046 LCN1P1Q5VSP4 162 aa9.15□□□□□ -0.94
TMEM260-206ENST00000555046 SLX4IPQ5VYV7 408 aa9.15□□□□□ -0.94
TMEM260-206ENST00000555046 SHEQ5VZ18 495 aa9.15□□□□□ -0.94
TMEM260-206ENST00000555046 TMEM236Q5W0B7 351 aa9.15□□□□□ -0.94
TMEM260-206ENST00000555046 KRT80Q6KB66 452 aa9.15□□□□□ -0.94
TMEM260-206ENST00000555046 RGS7BPQ6MZT1 257 aaPredicted RBP9.15□□□□□ -0.94
TMEM260-206ENST00000555046 ZNF774Q6NX45 483 aa9.15□□□□□ -0.94
TMEM260-206ENST00000555046 PLBD1Q6P4A8 553 aa9.15□□□□□ -0.94
TMEM260-206ENST00000555046 VHLLQ6RSH7 139 aa9.15□□□□□ -0.94
TMEM260-206ENST00000555046 UGT2A3Q6UWM9 527 aa9.15□□□□□ -0.94
TMEM260-206ENST00000555046 VASH1Q7L8A9 365 aaPredicted RBP9.15□□□□□ -0.94
TMEM260-206ENST00000555046 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.15□□□□□ -0.94
TMEM260-206ENST00000555046 CPOQ8IVL8 374 aa9.15□□□□□ -0.94
TMEM260-206ENST00000555046 CBR4Q8N4T8 237 aa9.15□□□□□ -0.94
TMEM260-206ENST00000555046 ZNF454Q8N9F8 522 aa9.15□□□□□ -0.94
TMEM260-206ENST00000555046 OR8J1Q8NGP2 316 aa9.15□□□□□ -0.94
TMEM260-206ENST00000555046 OR9Q1Q8NGQ5 310 aa9.15□□□□□ -0.94
TMEM260-206ENST00000555046 NRGNQ92686 78 aa9.15□□□□□ -0.94
TMEM260-206ENST00000555046 HTRA1Q92743 480 aa9.15□□□□□ -0.94
TMEM260-206ENST00000555046 NEUROG1Q92886 237 aa9.15□□□□□ -0.94
TMEM260-206ENST00000555046 SPTSSAQ969W0 71 aa9.15□□□□□ -0.94
TMEM260-206ENST00000555046 RDH12Q96NR8 316 aa9.15□□□□□ -0.94
TMEM260-206ENST00000555046 FOXN4Q96NZ1 517 aa9.15□□□□□ -0.94
TMEM260-206ENST00000555046 COQ7Q99807 217 aa9.15□□□□□ -0.94
TMEM260-206ENST00000555046 TRAF4Q9BUZ4 470 aaPredicted RBP9.15□□□□□ -0.94
TMEM260-206ENST00000555046 GABARAPL3Q9BY60 117 aa9.15□□□□□ -0.94
TMEM260-206ENST00000555046 GSX2Q9BZM3 304 aa9.15□□□□□ -0.94
TMEM260-206ENST00000555046 MS4A5Q9H3V2 200 aa9.15□□□□□ -0.94
TMEM260-206ENST00000555046 RIBC2Q9H4K1 309 aa9.15□□□□□ -0.94
TMEM260-206ENST00000555046 DCLRE1BQ9H816 532 aa9.15□□□□□ -0.94
TMEM260-206ENST00000555046 SP140LQ9H930 580 aa9.15□□□□□ -0.94
TMEM260-206ENST00000555046 DLL4Q9NR61 685 aa9.15□□□□□ -0.94
TMEM260-206ENST00000555046 ZNF701Q9NV72 531 aaPredicted RBP9.15□□□□□ -0.94
TMEM260-206ENST00000555046 TBCCD1Q9NVR7 557 aa9.15□□□□□ -0.94
TMEM260-206ENST00000555046 SLCO1C1Q9NYB5 712 aa9.15□□□□□ -0.94
TMEM260-206ENST00000555046 CADP27708 2225 aa9.15□□□□□ -0.95
TMEM260-206ENST00000555046 ERICH4A6NGS2 130 aa9.14□□□□□ -0.95
TMEM260-206ENST00000555046 H3BSA7 217 aa9.14□□□□□ -0.95
TMEM260-206ENST00000555046 OVOL3O00110 214 aa9.14□□□□□ -0.95
TMEM260-206ENST00000555046 EI24O14681 340 aa9.14□□□□□ -0.95
TMEM260-206ENST00000555046 RER1O15258 196 aa9.14□□□□□ -0.95
TMEM260-206ENST00000555046 MPZL2O60487 215 aa9.14□□□□□ -0.95
TMEM260-206ENST00000555046 ICMTO60725 284 aa9.14□□□□□ -0.95
TMEM260-206ENST00000555046 MITFO75030 526 aaPredicted RBP9.14□□□□□ -0.95
TMEM260-206ENST00000555046 ABHD16AO95870 558 aa9.14□□□□□ -0.95
TMEM260-206ENST00000555046 SOD3P08294 240 aa9.14□□□□□ -0.95
TMEM260-206ENST00000555046 GGT2P36268 569 aa9.14□□□□□ -0.95
TMEM260-206ENST00000555046 LIPAP38571 399 aa9.14□□□□□ -0.95
TMEM260-206ENST00000555046 HTR5AP47898 357 aa9.14□□□□□ -0.95
TMEM260-206ENST00000555046 TPTEP56180 551 aa9.14□□□□□ -0.95
TMEM260-206ENST00000555046 HIST1H3AP68431 136 aa9.14□□□□□ -0.95
TMEM260-206ENST00000555046 TMED1Q13445 227 aa9.14□□□□□ -0.95
TMEM260-206ENST00000555046 ADIPOQQ15848 244 aa9.14□□□□□ -0.95
TMEM260-206ENST00000555046 PCK2Q16822 640 aa9.14□□□□□ -0.95
TMEM260-206ENST00000555046 HIST2H3PS2Q5TEC6 136 aa9.14□□□□□ -0.95
TMEM260-206ENST00000555046 HIST2H3AQ71DI3 136 aa9.14□□□□□ -0.95
TMEM260-206ENST00000555046 TGIF2LYQ8IUE0 185 aa9.14□□□□□ -0.95
TMEM260-206ENST00000555046 GID4Q8IVV7 300 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms