RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 IGLV3-9A0A075B6K5 115 aa9.12□□□□□ -0.95
SHMT2-213ENST00000554600 IGLV1-36A0A0B4J1U3 117 aa9.12□□□□□ -0.95
SHMT2-213ENST00000554600 IGHV4-61A0A0C4DH41 118 aa9.12□□□□□ -0.95
SHMT2-213ENST00000554600 OR6C68A6NDL8 312 aa9.12□□□□□ -0.95
SHMT2-213ENST00000554600 C17orf100A8MU93 164 aa9.12□□□□□ -0.95
SHMT2-213ENST00000554600 A8MV72 311 aaPredicted RBP9.12□□□□□ -0.95
SHMT2-213ENST00000554600 VWC2LB2RUY7 222 aa9.12□□□□□ -0.95
SHMT2-213ENST00000554600 ACOT8O14734 319 aa9.12□□□□□ -0.95
SHMT2-213ENST00000554600 RER1O15258 196 aa9.12□□□□□ -0.95
SHMT2-213ENST00000554600 TIMM8AO60220 97 aaPredicted RBP9.12□□□□□ -0.95
SHMT2-213ENST00000554600 CDC14BO60729 498 aa9.12□□□□□ -0.95
SHMT2-213ENST00000554600 COX5BP10606 129 aa9.12□□□□□ -0.95
SHMT2-213ENST00000554600 ZNF16P17020 682 aaPredicted RBP9.12□□□□□ -0.95
SHMT2-213ENST00000554600 PYCR1P32322 319 aa9.12□□□□□ -0.95
SHMT2-213ENST00000554600 MAGEB1P43366 347 aa9.12□□□□□ -0.95
SHMT2-213ENST00000554600 GZMKP49863 264 aa9.12□□□□□ -0.95
SHMT2-213ENST00000554600 ZNF81P51508 661 aa9.12□□□□□ -0.95
SHMT2-213ENST00000554600 CCL8P80075 99 aa9.12□□□□□ -0.95
SHMT2-213ENST00000554600 TEKQ02763 1124 aa9.12□□□□□ -0.95
SHMT2-213ENST00000554600 TSTQ16762 297 aaKnown RBP9.12□□□□□ -0.95
SHMT2-213ENST00000554600 CORO6Q6QEF8 472 aa9.12□□□□□ -0.95
SHMT2-213ENST00000554600 LINC00346Q8IVM7 164 aa9.12□□□□□ -0.95
SHMT2-213ENST00000554600 PROKR2Q8NFJ6 384 aa9.12□□□□□ -0.95
SHMT2-213ENST00000554600 OR2AJ1Q8NGZ0 328 aa9.12□□□□□ -0.95
SHMT2-213ENST00000554600 OR1F12Q8NHA8 337 aa9.12□□□□□ -0.95
SHMT2-213ENST00000554600 KLF14Q8TD94 323 aaPredicted RBP9.12□□□□□ -0.95
SHMT2-213ENST00000554600 GTF3AQ92664 365 aaKnown RBP9.12□□□□□ -0.95
SHMT2-213ENST00000554600 RDH5Q92781 318 aa9.12□□□□□ -0.95
SHMT2-213ENST00000554600 MARS2Q96GW9 593 aaKnown RBP9.12□□□□□ -0.95
SHMT2-213ENST00000554600 SNX18Q96RF0 628 aa9.12□□□□□ -0.95
SHMT2-213ENST00000554600 RACGAP1Q9H0H5 632 aa9.12□□□□□ -0.95
SHMT2-213ENST00000554600 NARFLQ9H6Q4 476 aa9.12□□□□□ -0.95
SHMT2-213ENST00000554600 YY1AP1Q9H869 796 aa9.12□□□□□ -0.95
SHMT2-213ENST00000554600 DECR2Q9NUI1 292 aa9.12□□□□□ -0.95
SHMT2-213ENST00000554600 ARMC1Q9NVT9 282 aa9.12□□□□□ -0.95
SHMT2-213ENST00000554600 LRP5LA4QPB2 252 aa9.11□□□□□ -0.95
SHMT2-213ENST00000554600 H3BN98 237 aa9.11□□□□□ -0.95
SHMT2-213ENST00000554600 BHLHE40O14503 412 aa9.11□□□□□ -0.95
SHMT2-213ENST00000554600 PPIHO43447 177 aaKnown RBP9.11□□□□□ -0.95
SHMT2-213ENST00000554600 SPRY3O43610 288 aa9.11□□□□□ -0.95
SHMT2-213ENST00000554600 NCR1O76036 304 aa9.11□□□□□ -0.95
SHMT2-213ENST00000554600 IGHV3-13P01766 116 aa9.11□□□□□ -0.95
SHMT2-213ENST00000554600 IGHV4-31P0DP07 118 aa9.11□□□□□ -0.95
SHMT2-213ENST00000554600 GAAP10253 952 aa9.11□□□□□ -0.95
SHMT2-213ENST00000554600 ZNF823P16415 610 aa9.11□□□□□ -0.95
SHMT2-213ENST00000554600 ZNF23P17027 643 aa9.11□□□□□ -0.95
SHMT2-213ENST00000554600 COL8A2P25067 703 aa9.11□□□□□ -0.95
SHMT2-213ENST00000554600 GIFP27352 417 aa9.11□□□□□ -0.95
SHMT2-213ENST00000554600 GPR6P46095 362 aaPredicted RBP9.11□□□□□ -0.95
SHMT2-213ENST00000554600 RASSF2P50749 326 aa9.11□□□□□ -0.95
SHMT2-213ENST00000554600 CHN2P52757 468 aa9.11□□□□□ -0.95
SHMT2-213ENST00000554600 KCNMB1Q16558 191 aa9.11□□□□□ -0.95
SHMT2-213ENST00000554600 PCGF3Q3KNV8 242 aa9.11□□□□□ -0.95
SHMT2-213ENST00000554600 CCDC92Q53HC0 331 aaPredicted RBP9.11□□□□□ -0.95
SHMT2-213ENST00000554600 ELFN2Q5R3F8 820 aa9.11□□□□□ -0.95
SHMT2-213ENST00000554600 C6orf52Q5T4I8 152 aa9.11□□□□□ -0.95
SHMT2-213ENST00000554600 ZNF770Q6IQ21 691 aaPredicted RBP9.11□□□□□ -0.95
SHMT2-213ENST00000554600 C1orf174Q8IYL3 243 aa9.11□□□□□ -0.95
SHMT2-213ENST00000554600 NPEPL1Q8NDH3 523 aa9.11□□□□□ -0.95
SHMT2-213ENST00000554600 GJC3Q8NFK1 279 aa9.11□□□□□ -0.95
SHMT2-213ENST00000554600 SLC26A10Q8NG04 563 aa9.11□□□□□ -0.95
SHMT2-213ENST00000554600 OR2T33Q8NG76 320 aa9.11□□□□□ -0.95
SHMT2-213ENST00000554600 OR51L1Q8NGJ5 315 aa9.11□□□□□ -0.95
SHMT2-213ENST00000554600 OR8D4Q8NGM9 314 aa9.11□□□□□ -0.95
SHMT2-213ENST00000554600 OR9Q1Q8NGQ5 310 aa9.11□□□□□ -0.95
SHMT2-213ENST00000554600 OR2T4Q8NH00 348 aa9.11□□□□□ -0.95
SHMT2-213ENST00000554600 TEX47Q8TBZ9 253 aa9.11□□□□□ -0.95
SHMT2-213ENST00000554600 OTULINQ96BN8 352 aa9.11□□□□□ -0.95
SHMT2-213ENST00000554600 SLC7A6OSQ96CW6 309 aaPredicted RBP9.11□□□□□ -0.95
SHMT2-213ENST00000554600 PITX2Q99697 317 aa9.11□□□□□ -0.95
SHMT2-213ENST00000554600 DGCR6LQ9BY27 220 aa9.11□□□□□ -0.95
SHMT2-213ENST00000554600 HDHD2Q9H0R4 259 aa9.11□□□□□ -0.95
SHMT2-213ENST00000554600 CHODLQ9H9P2 273 aa9.11□□□□□ -0.95
SHMT2-213ENST00000554600 IL20Q9NYY1 176 aa9.11□□□□□ -0.95
SHMT2-213ENST00000554600 PDP1Q9P0J1 537 aaPredicted RBP9.11□□□□□ -0.95
SHMT2-213ENST00000554600 KLHL21Q9UJP4 597 aa9.11□□□□□ -0.95
SHMT2-213ENST00000554600 POMPQ9Y244 141 aa9.11□□□□□ -0.95
SHMT2-213ENST00000554600 LHFPL6Q9Y693 200 aa9.11□□□□□ -0.95
SHMT2-213ENST00000554600 LOC100289279A0A1B0GTE1 492 aa9.1□□□□□ -0.95
SHMT2-213ENST00000554600 OR6C6A6NF89 314 aa9.1□□□□□ -0.95
SHMT2-213ENST00000554600 TVP23AA6NH52 213 aa9.1□□□□□ -0.95
SHMT2-213ENST00000554600 RIIAD1A6NNX1 92 aa9.1□□□□□ -0.95
SHMT2-213ENST00000554600 GSC2O15499 205 aa9.1□□□□□ -0.95
SHMT2-213ENST00000554600 FKBP6O75344 327 aa9.1□□□□□ -0.95
SHMT2-213ENST00000554600 ATP5HO75947 161 aa9.1□□□□□ -0.95
SHMT2-213ENST00000554600 IFNGP01579 166 aa9.1□□□□□ -0.95
SHMT2-213ENST00000554600 TFP02787 698 aa9.1□□□□□ -0.95
SHMT2-213ENST00000554600 GYPBP06028 91 aa9.1□□□□□ -0.95
SHMT2-213ENST00000554600 DBHP09172 617 aa9.1□□□□□ -0.95
SHMT2-213ENST00000554600 HOXB6P17509 224 aaKnown RBP9.1□□□□□ -0.95
SHMT2-213ENST00000554600 ACHEP22303 614 aa9.1□□□□□ -0.95
SHMT2-213ENST00000554600 POU1F1P28069 291 aa9.1□□□□□ -0.95
SHMT2-213ENST00000554600 CBX1P83916 185 aa9.1□□□□□ -0.95
SHMT2-213ENST00000554600 BNIP1Q12981 228 aa9.1□□□□□ -0.95
SHMT2-213ENST00000554600 CCNIQ14094 377 aa9.1□□□□□ -0.95
SHMT2-213ENST00000554600 GK3PQ14409 553 aa9.1□□□□□ -0.95
SHMT2-213ENST00000554600 TRIP10Q15642 601 aa9.1□□□□□ -0.95
SHMT2-213ENST00000554600 MBNL2Q5VZF2 373 aaKnown RBP9.1□□□□□ -0.95
SHMT2-213ENST00000554600 USP51Q70EK9 711 aa9.1□□□□□ -0.95
SHMT2-213ENST00000554600 ZBTB46Q86UZ6 589 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms