RNA–Protein interactions for RNA: ENST00000554384.1

CHD8-207, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-207ENST00000554384 CMA1P23946 247 aa3.34□□□□□ -1.87
CHD8-207ENST00000554384 CHMLP26374 656 aa3.34□□□□□ -1.87
CHD8-207ENST00000554384 SSR1P43307 286 aaKnown RBP3.34□□□□□ -1.87
CHD8-207ENST00000554384 GPR6P46095 362 aaPredicted RBP3.34□□□□□ -1.87
CHD8-207ENST00000554384 CDKN1BP46527 198 aa3.34□□□□□ -1.87
CHD8-207ENST00000554384 TDGF1P3P51864 188 aa3.34□□□□□ -1.87
CHD8-207ENST00000554384 KCNJ2P63252 427 aa3.34□□□□□ -1.87
CHD8-207ENST00000554384 SF3A2Q15428 464 aaKnown RBP3.34□□□□□ -1.87
CHD8-207ENST00000554384 TGFBIQ15582 683 aa3.34□□□□□ -1.87
CHD8-207ENST00000554384 CYB5R2Q6BCY4 276 aa3.34□□□□□ -1.87
CHD8-207ENST00000554384 ZNF836Q6ZNA1 936 aa3.34□□□□□ -1.87
CHD8-207ENST00000554384 SLC25A48Q6ZT89 311 aaKnown RBP3.34□□□□□ -1.87
CHD8-207ENST00000554384 NANOGNBQ7Z5D8 188 aa3.34□□□□□ -1.87
CHD8-207ENST00000554384 ZNF429Q86V71 674 aa3.34□□□□□ -1.87
CHD8-207ENST00000554384 KCNG3Q8TAE7 436 aa3.34□□□□□ -1.87
CHD8-207ENST00000554384 ZNF285Q96NJ3 590 aa3.34□□□□□ -1.87
CHD8-207ENST00000554384 MFFQ9GZY8 342 aa3.34□□□□□ -1.87
CHD8-207ENST00000554384 DNTTIP1Q9H147 329 aa3.34□□□□□ -1.87
CHD8-207ENST00000554384 IKZF2Q9UKS7 526 aa3.34□□□□□ -1.87
CHD8-207ENST00000554384 RAB23Q9ULC3 237 aa3.34□□□□□ -1.87
CHD8-207ENST00000554384 FANCIQ9NVI1 1328 aa3.34□□□□□ -1.87
CHD8-207ENST00000554384 RALGAPA2Q2PPJ7 1873 aa3.34□□□□□ -1.87
CHD8-207ENST00000554384 DOPEY1Q5JWR5 2465 aa3.34□□□□□ -1.88
CHD8-207ENST00000554384 TEX15Q9BXT5 2789 aa3.34□□□□□ -1.88
CHD8-207ENST00000554384 DOCK2Q92608 1830 aa3.33□□□□□ -1.88
CHD8-207ENST00000554384 GOLGA8OA6NCC3 632 aa3.33□□□□□ -1.88
CHD8-207ENST00000554384 TRIM49D1C9J1S8 452 aa3.33□□□□□ -1.88
CHD8-207ENST00000554384 GOLGA8NF8WBI6 632 aa3.33□□□□□ -1.88
CHD8-207ENST00000554384 AP3B1O00203 1094 aa3.33□□□□□ -1.88
CHD8-207ENST00000554384 SUPT3HO75486 399 aa3.33□□□□□ -1.88
CHD8-207ENST00000554384 SLC25A27O95847 323 aa3.33□□□□□ -1.88
CHD8-207ENST00000554384 CSF3P09919 207 aa3.33□□□□□ -1.88
CHD8-207ENST00000554384 AZU1P20160 251 aa3.33□□□□□ -1.88
CHD8-207ENST00000554384 RORAP35398 523 aa3.33□□□□□ -1.88
CHD8-207ENST00000554384 HSD17B2P37059 387 aa3.33□□□□□ -1.88
CHD8-207ENST00000554384 CRYBB2P43320 205 aa3.33□□□□□ -1.88
CHD8-207ENST00000554384 RORCP51449 518 aa3.33□□□□□ -1.88
CHD8-207ENST00000554384 FBXW4P57775 412 aa3.33□□□□□ -1.88
CHD8-207ENST00000554384 AQP6Q13520 282 aa3.33□□□□□ -1.88
CHD8-207ENST00000554384 MPPED2Q15777 294 aa3.33□□□□□ -1.88
CHD8-207ENST00000554384 RFX4Q33E94 735 aa3.33□□□□□ -1.88
CHD8-207ENST00000554384 PRAMEF20Q5VT98 475 aa3.33□□□□□ -1.88
CHD8-207ENST00000554384 RNF175Q8N4F7 328 aa3.33□□□□□ -1.88
CHD8-207ENST00000554384 SLC2A14Q8TDB8 520 aa3.33□□□□□ -1.88
CHD8-207ENST00000554384 SDR42E1Q8WUS8 393 aa3.33□□□□□ -1.88
CHD8-207ENST00000554384 DNAJC19Q96DA6 116 aa3.33□□□□□ -1.88
CHD8-207ENST00000554384 ZNF414Q96IQ9 312 aa3.33□□□□□ -1.88
CHD8-207ENST00000554384 TPD52L3Q96J77 140 aa3.33□□□□□ -1.88
CHD8-207ENST00000554384 CWH43Q9H720 699 aa3.33□□□□□ -1.88
CHD8-207ENST00000554384 ANKRA2Q9H9E1 313 aa3.33□□□□□ -1.88
CHD8-207ENST00000554384 SLC2A8Q9NY64 477 aa3.33□□□□□ -1.88
CHD8-207ENST00000554384 MAPK8IP3Q9UPT6 1336 aa3.33□□□□□ -1.88
CHD8-207ENST00000554384 TRBV6-6A0A0A6YYG2 114 aa3.32□□□□□ -1.88
CHD8-207ENST00000554384 A0A0U1RQS6 177 aa3.32□□□□□ -1.88
CHD8-207ENST00000554384 A0A1B0GVI7 797 aa3.32□□□□□ -1.88
CHD8-207ENST00000554384 CIB4A0PJX0 185 aa3.32□□□□□ -1.88
CHD8-207ENST00000554384 OR2AG2A6NM03 316 aa3.32□□□□□ -1.88
CHD8-207ENST00000554384 ZNF726A6NNF4 738 aa3.32□□□□□ -1.88
CHD8-207ENST00000554384 C11orf94C9JXX5 98 aa3.32□□□□□ -1.88
CHD8-207ENST00000554384 C5orf67F2Z3F1 127 aa3.32□□□□□ -1.88
CHD8-207ENST00000554384 MGRN1O60291 552 aa3.32□□□□□ -1.88
CHD8-207ENST00000554384 RETP07949 1114 aa3.32□□□□□ -1.88
CHD8-207ENST00000554384 MCF2P10911 925 aa3.32□□□□□ -1.88
CHD8-207ENST00000554384 FOLR1P15328 257 aa3.32□□□□□ -1.88
CHD8-207ENST00000554384 MGMTP16455 207 aa3.32□□□□□ -1.88
CHD8-207ENST00000554384 YAP1P46937 504 aaKnown RBP3.32□□□□□ -1.88
CHD8-207ENST00000554384 NCBP2P52298 156 aaKnown RBP eCLIP3.32□□□□□ -1.88
CHD8-207ENST00000554384 SUCLG1P53597 346 aaKnown RBP3.32□□□□□ -1.88
CHD8-207ENST00000554384 SUB1P53999 127 aaKnown RBP eCLIP3.32□□□□□ -1.88
CHD8-207ENST00000554384 ATP5IP56385 69 aaPredicted RBP3.32□□□□□ -1.88
CHD8-207ENST00000554384 MECOMQ03112 1051 aa3.32□□□□□ -1.88
CHD8-207ENST00000554384 SGCAQ16586 387 aa3.32□□□□□ -1.88
CHD8-207ENST00000554384 MS4A15Q8N5U1 240 aa3.32□□□□□ -1.88
CHD8-207ENST00000554384 CCDC54Q8NEL0 328 aa3.32□□□□□ -1.88
CHD8-207ENST00000554384 OR1S2Q8NGQ3 325 aa3.32□□□□□ -1.88
CHD8-207ENST00000554384 OR1N2Q8NGR9 330 aa3.32□□□□□ -1.88
CHD8-207ENST00000554384 OR2G3Q8NGZ4 309 aa3.32□□□□□ -1.88
CHD8-207ENST00000554384 FAM104AQ969W3 186 aa3.32□□□□□ -1.88
CHD8-207ENST00000554384 ZNF799Q96GE5 643 aa3.32□□□□□ -1.88
CHD8-207ENST00000554384 LINC00167Q96N53 147 aa3.32□□□□□ -1.88
CHD8-207ENST00000554384 MTG1Q9BT17 334 aaPredicted RBP3.32□□□□□ -1.88
CHD8-207ENST00000554384 GABARAPL3Q9BY60 117 aa3.32□□□□□ -1.88
CHD8-207ENST00000554384 PLA2G2FQ9BZM2 168 aa3.32□□□□□ -1.88
CHD8-207ENST00000554384 MRPL47Q9HD33 250 aaKnown RBP3.32□□□□□ -1.88
CHD8-207ENST00000554384 GLRX2Q9NS18 164 aa3.32□□□□□ -1.88
CHD8-207ENST00000554384 EXD2Q9NVH0 621 aa3.32□□□□□ -1.88
CHD8-207ENST00000554384 GNPTGQ9UJJ9 305 aa3.32□□□□□ -1.88
CHD8-207ENST00000554384 PACSIN2Q9UNF0 486 aaPredicted RBP3.32□□□□□ -1.88
CHD8-207ENST00000554384 MROH7-TTC4A0A0A0MT08 1334 aa3.32□□□□□ -1.88
CHD8-207ENST00000554384 SIP14410 1827 aa3.32□□□□□ -1.88
CHD8-207ENST00000554384 ZNF236Q9UL36 1845 aa3.32□□□□□ -1.88
CHD8-207ENST00000554384 CDK5RAP2Q96SN8 1893 aa3.32□□□□□ -1.88
CHD8-207ENST00000554384 SCN2AQ99250 2005 aa3.32□□□□□ -1.88
CHD8-207ENST00000554384 SPTA1P02549 2419 aa3.32□□□□□ -1.88
CHD8-207ENST00000554384 AKAP13Q12802 2813 aa3.32□□□□□ -1.88
CHD8-207ENST00000554384 TET1Q8NFU7 2136 aa3.31□□□□□ -1.88
CHD8-207ENST00000554384 PTPRSQ13332 1948 aa3.31□□□□□ -1.88
CHD8-207ENST00000554384 HEATR9A2RTY3 570 aa3.31□□□□□ -1.88
CHD8-207ENST00000554384 CCDC182A6NF36 153 aa3.31□□□□□ -1.88
CHD8-207ENST00000554384 ERLIN1O75477 346 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms