RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 NKAIN4Q8IVV8 208 aa1.74□□□□□ -2.13
SRP54-204ENST00000553923 CDKL3Q8IVW4 592 aaPredicted RBP1.74□□□□□ -2.13
SRP54-204ENST00000553923 C9orf40Q8IXQ3 194 aa1.74□□□□□ -2.13
SRP54-204ENST00000553923 PIANPQ8IYJ0 282 aa1.74□□□□□ -2.13
SRP54-204ENST00000553923 SLC7A5P1Q8MH63 180 aa1.74□□□□□ -2.13
SRP54-204ENST00000553923 KRT222Q8N1A0 295 aa1.74□□□□□ -2.13
SRP54-204ENST00000553923 ABHD12Q8N2K0 398 aa1.74□□□□□ -2.13
SRP54-204ENST00000553923 CADM2Q8N3J6 435 aa1.74□□□□□ -2.13
SRP54-204ENST00000553923 CDRT4Q8N9R6 151 aa1.74□□□□□ -2.13
SRP54-204ENST00000553923 OR2AP1Q8NGE2 309 aa1.74□□□□□ -2.13
SRP54-204ENST00000553923 OR6K2Q8NGY2 324 aa1.74□□□□□ -2.13
SRP54-204ENST00000553923 OR51A7Q8NH64 312 aa1.74□□□□□ -2.13
SRP54-204ENST00000553923 OR9G1Q8NH87 305 aa1.74□□□□□ -2.13
SRP54-204ENST00000553923 VN1R17PQ8TDU5 208 aa1.74□□□□□ -2.13
SRP54-204ENST00000553923 NPRL2Q8WTW4 380 aa1.74□□□□□ -2.13
SRP54-204ENST00000553923 TFB1MQ8WVM0 346 aaKnown RBP1.74□□□□□ -2.13
SRP54-204ENST00000553923 APH1BQ8WW43 257 aa1.74□□□□□ -2.13
SRP54-204ENST00000553923 ARPC1AQ92747 370 aa1.74□□□□□ -2.13
SRP54-204ENST00000553923 RPEQ96AT9 228 aa1.74□□□□□ -2.13
SRP54-204ENST00000553923 DNAJC1Q96KC8 554 aaKnown RBP1.74□□□□□ -2.13
SRP54-204ENST00000553923 LINC00167Q96N53 147 aa1.74□□□□□ -2.13
SRP54-204ENST00000553923 SERPINB12Q96P63 405 aa1.74□□□□□ -2.13
SRP54-204ENST00000553923 PSMB7Q99436 277 aa1.74□□□□□ -2.13
SRP54-204ENST00000553923 TSG101Q99816 390 aa1.74□□□□□ -2.13
SRP54-204ENST00000553923 CIB1Q99828 191 aa1.74□□□□□ -2.13
SRP54-204ENST00000553923 ZNF251Q9BRH9 671 aa1.74□□□□□ -2.13
SRP54-204ENST00000553923 CALN1Q9BXU9 219 aa1.74□□□□□ -2.13
SRP54-204ENST00000553923 ING2Q9H160 280 aa1.74□□□□□ -2.13
SRP54-204ENST00000553923 TMBIM4Q9HC24 238 aa1.74□□□□□ -2.13
SRP54-204ENST00000553923 CD209Q9NNX6 404 aa1.74□□□□□ -2.13
SRP54-204ENST00000553923 AMBNQ9NP70 447 aa1.74□□□□□ -2.13
SRP54-204ENST00000553923 SDHAF2Q9NX18 166 aa1.74□□□□□ -2.13
SRP54-204ENST00000553923 IMPAD1Q9NX62 359 aa1.74□□□□□ -2.13
SRP54-204ENST00000553923 THAP10Q9P2Z0 257 aaPredicted RBP1.74□□□□□ -2.13
SRP54-204ENST00000553923 ZNF282Q9UDV7 671 aaPredicted RBP1.74□□□□□ -2.13
SRP54-204ENST00000553923 KLHL21Q9UJP4 597 aa1.74□□□□□ -2.13
SRP54-204ENST00000553923 SPATA2Q9UM82 520 aa1.74□□□□□ -2.13
SRP54-204ENST00000553923 HYOU1Q9Y4L1 999 aa1.74□□□□□ -2.13
SRP54-204ENST00000553923 AQRO60306 1485 aaKnown RBP eCLIP1.74□□□□□ -2.13
SRP54-204ENST00000553923 IGHV1OR21-1A0A087WYE8 117 aa1.73□□□□□ -2.13
SRP54-204ENST00000553923 ISPDA4D126 451 aa1.73□□□□□ -2.13
SRP54-204ENST00000553923 GOLGA6L10A6NI86 522 aa1.73□□□□□ -2.13
SRP54-204ENST00000553923 HIDE1A8MVS5 230 aa1.73□□□□□ -2.13
SRP54-204ENST00000553923 A8MX80 341 aa1.73□□□□□ -2.13
SRP54-204ENST00000553923 RNASEK-C17orf49H0YIS7 233 aa1.73□□□□□ -2.13
SRP54-204ENST00000553923 H7C2Y5 167 aa1.73□□□□□ -2.13
SRP54-204ENST00000553923 DFFAO00273 331 aa1.73□□□□□ -2.13
SRP54-204ENST00000553923 SLC17A2O00624 439 aa1.73□□□□□ -2.13
SRP54-204ENST00000553923 NME4O00746 187 aa1.73□□□□□ -2.13
SRP54-204ENST00000553923 TNFSF11O14788 317 aa1.73□□□□□ -2.13
SRP54-204ENST00000553923 LIN7AO14910 233 aaPredicted RBP1.73□□□□□ -2.13
SRP54-204ENST00000553923 B4GALT5O43286 388 aa1.73□□□□□ -2.13
SRP54-204ENST00000553923 AQP9O43315 295 aa1.73□□□□□ -2.13
SRP54-204ENST00000553923 RAD51CO43502 376 aa1.73□□□□□ -2.13
SRP54-204ENST00000553923 GCGP01275 180 aa1.73□□□□□ -2.13
SRP54-204ENST00000553923 DCNP07585 359 aaKnown RBP1.73□□□□□ -2.13
SRP54-204ENST00000553923 KRT7P08729 469 aa1.73□□□□□ -2.13
SRP54-204ENST00000553923 PNMA6AP0CW24 399 aaPredicted RBP1.73□□□□□ -2.13
SRP54-204ENST00000553923 LIPCP11150 499 aa1.73□□□□□ -2.13
SRP54-204ENST00000553923 LAMP1P11279 417 aa1.73□□□□□ -2.13
SRP54-204ENST00000553923 FOLR2P14207 255 aa1.73□□□□□ -2.13
SRP54-204ENST00000553923 MAGP20916 626 aa1.73□□□□□ -2.13
SRP54-204ENST00000553923 IGHV1-2P23083 117 aa1.73□□□□□ -2.13
SRP54-204ENST00000553923 IGFBP5P24593 272 aa1.73□□□□□ -2.13
SRP54-204ENST00000553923 LMO2P25791 158 aa1.73□□□□□ -2.13
SRP54-204ENST00000553923 FMO3P31513 532 aa1.73□□□□□ -2.13
SRP54-204ENST00000553923 S100A5P33763 92 aa1.73□□□□□ -2.13
SRP54-204ENST00000553923 CEACAM3P40198 252 aa1.73□□□□□ -2.13
SRP54-204ENST00000553923 GLP1RP43220 463 aa1.73□□□□□ -2.13
SRP54-204ENST00000553923 BTDP43251 543 aa1.73□□□□□ -2.13
SRP54-204ENST00000553923 OR3A4PP47883 348 aa1.73□□□□□ -2.13
SRP54-204ENST00000553923 HCAR3P49019 387 aa1.73□□□□□ -2.13
SRP54-204ENST00000553923 DNASE1L1P49184 302 aa1.73□□□□□ -2.13
SRP54-204ENST00000553923 UGT2B15P54855 530 aa1.73□□□□□ -2.13
SRP54-204ENST00000553923 ERVPABLB-1P60509 514 aa1.73□□□□□ -2.13
SRP54-204ENST00000553923 RPL31P62899 125 aaKnown RBP1.73□□□□□ -2.13
SRP54-204ENST00000553923 CSNK1G2P78368 415 aa1.73□□□□□ -2.13
SRP54-204ENST00000553923 PITPNAQ00169 270 aa1.73□□□□□ -2.13
SRP54-204ENST00000553923 ZNF92Q03936 586 aa1.73□□□□□ -2.13
SRP54-204ENST00000553923 CD300CQ08708 224 aa1.73□□□□□ -2.13
SRP54-204ENST00000553923 STX4Q12846 297 aa1.73□□□□□ -2.13
SRP54-204ENST00000553923 EIF4EBP2Q13542 120 aaPredicted RBP1.73□□□□□ -2.13
SRP54-204ENST00000553923 TFDP2Q14188 446 aa1.73□□□□□ -2.13
SRP54-204ENST00000553923 GNA13Q14344 377 aa1.73□□□□□ -2.13
SRP54-204ENST00000553923 DMC1Q14565 340 aa1.73□□□□□ -2.13
SRP54-204ENST00000553923 CLINT1Q14677 625 aa1.73□□□□□ -2.13
SRP54-204ENST00000553923 MAD2L1BPQ15013 274 aaPredicted RBP1.73□□□□□ -2.13
SRP54-204ENST00000553923 OR4D1Q15615 310 aa1.73□□□□□ -2.13
SRP54-204ENST00000553923 CCL14Q16627 93 aa1.73□□□□□ -2.13
SRP54-204ENST00000553923 C5orf64Q2M2E5 130 aa1.73□□□□□ -2.13
SRP54-204ENST00000553923 C17orf58Q2M2W7 97 aa1.73□□□□□ -2.13
SRP54-204ENST00000553923 QRICH1Q2TAL8 776 aa1.73□□□□□ -2.13
SRP54-204ENST00000553923 NHLRC3Q5JS37 347 aa1.73□□□□□ -2.13
SRP54-204ENST00000553923 ZNF506Q5JVG8 444 aa1.73□□□□□ -2.13
SRP54-204ENST00000553923 FAM182AQ5T1J6 154 aa1.73□□□□□ -2.13
SRP54-204ENST00000553923 CCNJQ5T5M9 372 aa1.73□□□□□ -2.13
SRP54-204ENST00000553923 C9orf66Q5T8R8 295 aa1.73□□□□□ -2.13
SRP54-204ENST00000553923 LEMD1Q68G75 181 aa1.73□□□□□ -2.13
SRP54-204ENST00000553923 RWDD4Q6NW29 188 aaKnown RBP1.73□□□□□ -2.13
SRP54-204ENST00000553923 ZNF620Q6ZNG0 422 aa1.73□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms