RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 C5orf63A6NC05 138 aa15.46■□□□□ 0.07
SHMT2-206ENST00000553529 OR6C6A6NF89 314 aa15.46■□□□□ 0.07
SHMT2-206ENST00000553529 SRD5A1P18405 259 aa15.46■□□□□ 0.07
SHMT2-206ENST00000553529 FPR3P25089 353 aa15.46■□□□□ 0.07
SHMT2-206ENST00000553529 PYCR1P32322 319 aa15.46■□□□□ 0.07
SHMT2-206ENST00000553529 PCBD1P61457 104 aa15.46■□□□□ 0.07
SHMT2-206ENST00000553529 RSPO1Q2MKA7 263 aaPredicted RBP15.46■□□□□ 0.07
SHMT2-206ENST00000553529 KRTAP24-1Q3LI83 254 aa15.46■□□□□ 0.07
SHMT2-206ENST00000553529 GPR139Q6DWJ6 353 aa15.46■□□□□ 0.07
SHMT2-206ENST00000553529 NAA40Q86UY6 237 aa15.46■□□□□ 0.07
SHMT2-206ENST00000553529 CYB561A3Q8NBI2 242 aa15.46■□□□□ 0.07
SHMT2-206ENST00000553529 FNDC8Q8TC99 324 aa15.46■□□□□ 0.07
SHMT2-206ENST00000553529 MCUR1Q96AQ8 359 aa15.46■□□□□ 0.07
SHMT2-206ENST00000553529 NSL1Q96IY1 281 aa15.46■□□□□ 0.07
SHMT2-206ENST00000553529 PTTG3PQ9NZH4 202 aa15.46■□□□□ 0.07
SHMT2-206ENST00000553529 WIPI2Q9Y4P8 454 aa15.46■□□□□ 0.07
SHMT2-206ENST00000553529 U3KQV3 271 aa15.46■□□□□ 0.07
SHMT2-206ENST00000553529 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.46■□□□□ 0.073e-7■■■■■ 53.9
SHMT2-206ENST00000553529 GASTP01350 101 aa15.45■□□□□ 0.06
SHMT2-206ENST00000553529 ITGA2P17301 1181 aa15.45■□□□□ 0.06
SHMT2-206ENST00000553529 GUCA1AP43080 201 aaPredicted RBP15.45■□□□□ 0.06
SHMT2-206ENST00000553529 RPS6KA3P51812 740 aa15.45■□□□□ 0.06
SHMT2-206ENST00000553529 SELENOVP59797 346 aa15.45■□□□□ 0.06
SHMT2-206ENST00000553529 HOXA4Q00056 320 aaPredicted RBP15.45■□□□□ 0.06
SHMT2-206ENST00000553529 SCRN3Q0VDG4 424 aa15.45■□□□□ 0.06
SHMT2-206ENST00000553529 AQP6Q13520 282 aa15.45■□□□□ 0.06
SHMT2-206ENST00000553529 ZNF770Q6IQ21 691 aaPredicted RBP15.45■□□□□ 0.06
SHMT2-206ENST00000553529 ALDH16A1Q8IZ83 802 aa15.45■□□□□ 0.06
SHMT2-206ENST00000553529 OR52E2Q8NGJ4 325 aa15.45■□□□□ 0.06
SHMT2-206ENST00000553529 OR51L1Q8NGJ5 315 aa15.45■□□□□ 0.06
SHMT2-206ENST00000553529 OR1F12Q8NHA8 337 aa15.45■□□□□ 0.06
SHMT2-206ENST00000553529 CCL17Q92583 94 aa15.45■□□□□ 0.06
SHMT2-206ENST00000553529 CCDC124Q96CT7 223 aaKnown RBP15.45■□□□□ 0.06
SHMT2-206ENST00000553529 CMBLQ96DG6 245 aa15.45■□□□□ 0.06
SHMT2-206ENST00000553529 SAP30LQ9HAJ7 183 aa15.45■□□□□ 0.06
SHMT2-206ENST00000553529 MRPL22Q9NWU5 206 aaKnown RBP15.45■□□□□ 0.06
SHMT2-206ENST00000553529 KLHL21Q9UJP4 597 aa15.45■□□□□ 0.06
SHMT2-206ENST00000553529 POLR1DQ9Y2S0 133 aa15.45■□□□□ 0.06
SHMT2-206ENST00000553529 TVP23AA6NH52 213 aa15.44■□□□□ 0.06
SHMT2-206ENST00000553529 TNFRSF11BO00300 401 aa15.44■□□□□ 0.06
SHMT2-206ENST00000553529 TIMM8AO60220 97 aaPredicted RBP15.44■□□□□ 0.06
SHMT2-206ENST00000553529 ICMTO60725 284 aa15.44■□□□□ 0.06
SHMT2-206ENST00000553529 RGS9O75916 674 aaPredicted RBP15.44■□□□□ 0.06
SHMT2-206ENST00000553529 SOX14O95416 240 aa15.44■□□□□ 0.06
SHMT2-206ENST00000553529 AVPP01185 164 aa15.44■□□□□ 0.06
SHMT2-206ENST00000553529 SELEP16581 610 aa15.44■□□□□ 0.06
SHMT2-206ENST00000553529 SLC6A6P31641 620 aa15.44■□□□□ 0.06
SHMT2-206ENST00000553529 CRYBB2P43320 205 aa15.44■□□□□ 0.06
SHMT2-206ENST00000553529 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.44■□□□□ 0.06
SHMT2-206ENST00000553529 ADCK1Q86TW2 530 aa15.44■□□□□ 0.06
SHMT2-206ENST00000553529 JAZF1Q86VZ6 243 aa15.44■□□□□ 0.06
SHMT2-206ENST00000553529 SLC26A10Q8NG04 563 aa15.44■□□□□ 0.06
SHMT2-206ENST00000553529 OR4Q3Q8NH05 313 aa15.44■□□□□ 0.06
SHMT2-206ENST00000553529 GNPDA2Q8TDQ7 276 aa15.44■□□□□ 0.06
SHMT2-206ENST00000553529 HPS1Q92902 700 aa15.44■□□□□ 0.06
SHMT2-206ENST00000553529 DECR2Q9NUI1 292 aa15.44■□□□□ 0.06
SHMT2-206ENST00000553529 ACTR3BQ9P1U1 418 aa15.44■□□□□ 0.06
SHMT2-206ENST00000553529 PURGQ9UJV8 347 aaKnown RBP15.44■□□□□ 0.06
SHMT2-206ENST00000553529 NDRG4Q9ULP0 352 aaKnown RBP15.44■□□□□ 0.06
SHMT2-206ENST00000553529 H0YL77 283 aa15.43■□□□□ 0.06
SHMT2-206ENST00000553529 DEAF1O75398 565 aaPredicted RBP15.43■□□□□ 0.06
SHMT2-206ENST00000553529 UBOX5O94941 541 aa15.43■□□□□ 0.06
SHMT2-206ENST00000553529 CLUP10909 449 aa15.43■□□□□ 0.06
SHMT2-206ENST00000553529 MAGEA2P43356 314 aa15.43■□□□□ 0.06
SHMT2-206ENST00000553529 TSPAN31Q12999 210 aa15.43■□□□□ 0.06
SHMT2-206ENST00000553529 ZNF362Q5T0B9 420 aaPredicted RBP15.43■□□□□ 0.06
SHMT2-206ENST00000553529 C1orf229Q6ZS94 237 aaPredicted RBP15.43■□□□□ 0.06
SHMT2-206ENST00000553529 SYT9Q86SS6 491 aa15.43■□□□□ 0.06
SHMT2-206ENST00000553529 AQP11Q8NBQ7 271 aa15.43■□□□□ 0.06
SHMT2-206ENST00000553529 CCDC197Q8NCU1 140 aa15.43■□□□□ 0.06
SHMT2-206ENST00000553529 NPEPL1Q8NDH3 523 aa15.43■□□□□ 0.06
SHMT2-206ENST00000553529 OR10S1Q8NGN2 331 aa15.43■□□□□ 0.06
SHMT2-206ENST00000553529 OR9Q1Q8NGQ5 310 aa15.43■□□□□ 0.06
SHMT2-206ENST00000553529 DCLRE1CQ96SD1 692 aaKnown RBP15.43■□□□□ 0.06
SHMT2-206ENST00000553529 DDOQ99489 341 aa15.43■□□□□ 0.06
SHMT2-206ENST00000553529 PNRC2Q9NPJ4 139 aaKnown RBP15.43■□□□□ 0.06
SHMT2-206ENST00000553529 ARMC1Q9NVT9 282 aa15.43■□□□□ 0.06
SHMT2-206ENST00000553529 HIF1ANQ9NWT6 349 aa15.43■□□□□ 0.06
SHMT2-206ENST00000553529 NKIRAS2Q9NYR9 191 aa15.43■□□□□ 0.06
SHMT2-206ENST00000553529 TMEFF2Q9UIK5 374 aaPredicted RBP15.43■□□□□ 0.06
SHMT2-206ENST00000553529 TMCC3Q9ULS5 477 aa15.43■□□□□ 0.06
SHMT2-206ENST00000553529 ARHGAP32A7KAX9 2087 aa15.43■□□□□ 0.06
SHMT2-206ENST00000553529 BHLHE40O14503 412 aa15.42■□□□□ 0.06
SHMT2-206ENST00000553529 AHCYL1O43865 530 aa15.42■□□□□ 0.06
SHMT2-206ENST00000553529 FAM107AO95990 144 aa15.42■□□□□ 0.06
SHMT2-206ENST00000553529 GYPBP06028 91 aa15.42■□□□□ 0.06
SHMT2-206ENST00000553529 COX5BP10606 129 aa15.42■□□□□ 0.06
SHMT2-206ENST00000553529 LSM6P62312 80 aaKnown RBP15.42■□□□□ 0.06
SHMT2-206ENST00000553529 HIST1H3AP68431 136 aa15.42■□□□□ 0.06
SHMT2-206ENST00000553529 TEKQ02763 1124 aa15.42■□□□□ 0.06
SHMT2-206ENST00000553529 KCNMB1Q16558 191 aa15.42■□□□□ 0.06
SHMT2-206ENST00000553529 PCGF3Q3KNV8 242 aa15.42■□□□□ 0.06
SHMT2-206ENST00000553529 MTX3Q5HYI7 312 aa15.42■□□□□ 0.06
SHMT2-206ENST00000553529 HIST2H3PS2Q5TEC6 136 aa15.42■□□□□ 0.06
SHMT2-206ENST00000553529 OR2T2Q6IF00 324 aa15.42■□□□□ 0.06
SHMT2-206ENST00000553529 LCN8Q6JVE9 175 aa15.42■□□□□ 0.06
SHMT2-206ENST00000553529 SLC18B1Q6NT16 456 aa15.42■□□□□ 0.06
SHMT2-206ENST00000553529 HIST2H3AQ71DI3 136 aa15.42■□□□□ 0.06
SHMT2-206ENST00000553529 TMEM179BQ7Z7N9 219 aa15.42■□□□□ 0.06
SHMT2-206ENST00000553529 OR2Z1Q8NG97 314 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms