RNA–Protein interactions for RNA: ENST00000553508.5

PCNX1-205, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 645 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-205ENST00000553508 RASGRF2O14827 1237 aa3.77□□□□□ -1.81
PCNX1-205ENST00000553508 NVLO15381 856 aaKnown RBP3.77□□□□□ -1.81
PCNX1-205ENST00000553508 KDELR3O43731 214 aa3.77□□□□□ -1.81
PCNX1-205ENST00000553508 MBD3O95983 291 aa3.77□□□□□ -1.81
PCNX1-205ENST00000553508 MOSP00540 346 aa3.77□□□□□ -1.81
PCNX1-205ENST00000553508 TNFP01375 233 aa3.77□□□□□ -1.81
PCNX1-205ENST00000553508 CALB1P05937 261 aa3.77□□□□□ -1.81
PCNX1-205ENST00000553508 PLEKP08567 350 aaPredicted RBP3.77□□□□□ -1.81
PCNX1-205ENST00000553508 CCDC172P0C7W6 258 aa3.77□□□□□ -1.81
PCNX1-205ENST00000553508 GIMD1P0DJR0 217 aa3.77□□□□□ -1.81
PCNX1-205ENST00000553508 ADRA1AP35348 466 aa3.77□□□□□ -1.81
PCNX1-205ENST00000553508 HNRNPA3P51991 378 aaKnown RBP3.77□□□□□ -1.81
PCNX1-205ENST00000553508 HSD17B7P56937 341 aa3.77□□□□□ -1.81
PCNX1-205ENST00000553508 SELENOTP62341 195 aa3.77□□□□□ -1.81
PCNX1-205ENST00000553508 IRF4Q15306 451 aa3.77□□□□□ -1.81
PCNX1-205ENST00000553508 HSP90AA5PQ58FG0 334 aa3.77□□□□□ -1.81
PCNX1-205ENST00000553508 RBM43Q6ZSC3 357 aaKnown RBP3.77□□□□□ -1.81
PCNX1-205ENST00000553508 RFLNAQ6ZTI6 216 aa3.77□□□□□ -1.81
PCNX1-205ENST00000553508 STRADAQ7RTN6 431 aa3.77□□□□□ -1.81
PCNX1-205ENST00000553508 DPY19L4Q7Z388 723 aa3.77□□□□□ -1.81
PCNX1-205ENST00000553508 ZNF683Q8IZ20 524 aa3.77□□□□□ -1.81
PCNX1-205ENST00000553508 GCNT2Q8N0V5 402 aa3.77□□□□□ -1.81
PCNX1-205ENST00000553508 OR6K2Q8NGY2 324 aa3.77□□□□□ -1.81
PCNX1-205ENST00000553508 RAPGEF5Q92565 580 aa3.77□□□□□ -1.81
PCNX1-205ENST00000553508 RPL3LQ92901 407 aaKnown RBP3.77□□□□□ -1.81
PCNX1-205ENST00000553508 NTAN1Q96AB6 310 aa3.77□□□□□ -1.81
PCNX1-205ENST00000553508 KIAA1143Q96AT1 154 aaPredicted RBP3.77□□□□□ -1.81
PCNX1-205ENST00000553508 BMFQ96LC9 184 aa3.77□□□□□ -1.81
PCNX1-205ENST00000553508 ZNF641Q96N77 438 aaPredicted RBP3.77□□□□□ -1.81
PCNX1-205ENST00000553508 KLF6Q99612 283 aaPredicted RBP3.77□□□□□ -1.81
PCNX1-205ENST00000553508 SLC6A7Q99884 636 aa3.77□□□□□ -1.81
PCNX1-205ENST00000553508 PELOQ9BRX2 385 aaKnown RBP3.77□□□□□ -1.81
PCNX1-205ENST00000553508 RTBDNQ9BSG5 229 aaPredicted RBP3.77□□□□□ -1.81
PCNX1-205ENST00000553508 HDHD3Q9BSH5 251 aaPredicted RBP3.77□□□□□ -1.81
PCNX1-205ENST00000553508 TUBGCP2Q9BSJ2 902 aa3.77□□□□□ -1.81
PCNX1-205ENST00000553508 NAT10Q9H0A0 1025 aaKnown RBP3.77□□□□□ -1.81
PCNX1-205ENST00000553508 NECAP2Q9NVZ3 263 aa3.77□□□□□ -1.81
PCNX1-205ENST00000553508 NINJ2Q9NZG7 142 aa3.77□□□□□ -1.81
PCNX1-205ENST00000553508 PISDQ9UG56 409 aa3.77□□□□□ -1.81
PCNX1-205ENST00000553508 NUFIP1Q9UHK0 495 aaKnown RBP3.77□□□□□ -1.81
PCNX1-205ENST00000553508 MFHAS1Q9Y4C4 1052 aa3.77□□□□□ -1.81
PCNX1-205ENST00000553508 U3KQA8 63 aa3.77□□□□□ -1.81
PCNX1-205ENST00000553508 ATMQ13315 3056 aa3.77□□□□□ -1.81
PCNX1-205ENST00000553508 DOPEY1Q5JWR5 2465 aa3.76□□□□□ -1.81
PCNX1-205ENST00000553508 TSPAN11A1L157 253 aa3.76□□□□□ -1.81
PCNX1-205ENST00000553508 F8VZ95 297 aa3.76□□□□□ -1.81
PCNX1-205ENST00000553508 DLGAP1O14490 977 aa3.76□□□□□ -1.81
PCNX1-205ENST00000553508 RAD51BO15315 384 aa3.76□□□□□ -1.81
PCNX1-205ENST00000553508 NOL3O60936 208 aaKnown RBP3.76□□□□□ -1.81
PCNX1-205ENST00000553508 UGT2B17O75795 530 aa3.76□□□□□ -1.81
PCNX1-205ENST00000553508 OR4F21O95013 312 aa3.76□□□□□ -1.81
PCNX1-205ENST00000553508 UCHL3P15374 230 aa3.76□□□□□ -1.81
PCNX1-205ENST00000553508 CD80P33681 288 aa3.76□□□□□ -1.81
PCNX1-205ENST00000553508 HSPA9P38646 679 aaKnown RBP3.76□□□□□ -1.81
PCNX1-205ENST00000553508 AP1S1P61966 158 aa3.76□□□□□ -1.81
PCNX1-205ENST00000553508 UBE2HP62256 183 aa3.76□□□□□ -1.81
PCNX1-205ENST00000553508 C1orf61Q13536 156 aa3.76□□□□□ -1.81
PCNX1-205ENST00000553508 KLHL40Q2TBA0 621 aa3.76□□□□□ -1.81
PCNX1-205ENST00000553508 CASC10Q5T4H9 136 aa3.76□□□□□ -1.81
PCNX1-205ENST00000553508 OR52W1Q6IF63 320 aa3.76□□□□□ -1.81
PCNX1-205ENST00000553508 DNAJC24Q6P3W2 148 aa3.76□□□□□ -1.81
PCNX1-205ENST00000553508 DCUN1D2Q6PH85 259 aa3.76□□□□□ -1.81
PCNX1-205ENST00000553508 ISLR2Q6UXK2 745 aa3.76□□□□□ -1.81
PCNX1-205ENST00000553508 UMODL1-AS1Q8N2C9 162 aa3.76□□□□□ -1.81
PCNX1-205ENST00000553508 BBS5Q8N3I7 341 aa3.76□□□□□ -1.81
PCNX1-205ENST00000553508 SVOPLQ8N434 492 aa3.76□□□□□ -1.81
PCNX1-205ENST00000553508 OR56A4Q8NGH8 313 aa3.76□□□□□ -1.81
PCNX1-205ENST00000553508 SELENOMQ8WWX9 145 aa3.76□□□□□ -1.81
PCNX1-205ENST00000553508 RXFP2Q8WXD0 754 aa3.76□□□□□ -1.81
PCNX1-205ENST00000553508 CATSPER2Q96P56 530 aa3.76□□□□□ -1.81
PCNX1-205ENST00000553508 TSGA13Q96PP4 275 aa3.76□□□□□ -1.81
PCNX1-205ENST00000553508 C11orf70Q9BRQ4 267 aa3.76□□□□□ -1.81
PCNX1-205ENST00000553508 LRRN3Q9H3W5 708 aa3.76□□□□□ -1.81
PCNX1-205ENST00000553508 C6orf203Q9P0P8 240 aaPredicted RBP3.76□□□□□ -1.81
PCNX1-205ENST00000553508 ACTR3BQ9P1U1 418 aa3.76□□□□□ -1.81
PCNX1-205ENST00000553508 B9D1Q9UPM9 204 aa3.76□□□□□ -1.81
PCNX1-205ENST00000553508 SNX10Q9Y5X0 201 aa3.76□□□□□ -1.81
PCNX1-205ENST00000553508 ALG6Q9Y672 507 aa3.76□□□□□ -1.81
PCNX1-205ENST00000553508 CREBBPQ92793 2442 aa3.76□□□□□ -1.81
PCNX1-205ENST00000553508 ITPR2Q14571 2701 aa3.75□□□□□ -1.81
PCNX1-205ENST00000553508 RP1P56715 2156 aa3.75□□□□□ -1.81
PCNX1-205ENST00000553508 A0A096LNJ9 63 aa3.75□□□□□ -1.81
PCNX1-205ENST00000553508 LRCOL1A6NCL2 159 aa3.75□□□□□ -1.81
PCNX1-205ENST00000553508 E7ESA3 106 aa3.75□□□□□ -1.81
PCNX1-205ENST00000553508 PRKYO43930 277 aa3.75□□□□□ -1.81
PCNX1-205ENST00000553508 CA1P00915 261 aaPredicted RBP3.75□□□□□ -1.81
PCNX1-205ENST00000553508 PNMA6AP0CW24 399 aaPredicted RBP3.75□□□□□ -1.81
PCNX1-205ENST00000553508 PMELP40967 661 aa3.75□□□□□ -1.81
PCNX1-205ENST00000553508 PRKXP51817 358 aa3.75□□□□□ -1.81
PCNX1-205ENST00000553508 TPI1P60174 286 aa3.75□□□□□ -1.81
PCNX1-205ENST00000553508 CCL7P80098 99 aa3.75□□□□□ -1.81
PCNX1-205ENST00000553508 EWSR1Q01844 656 aaKnown RBP eCLIP3.75□□□□□ -1.81
PCNX1-205ENST00000553508 ZNF235Q14590 738 aa3.75□□□□□ -1.81
PCNX1-205ENST00000553508 ARL6IP1Q15041 203 aa3.75□□□□□ -1.81
PCNX1-205ENST00000553508 NRF1Q16656 503 aa3.75□□□□□ -1.81
PCNX1-205ENST00000553508 SPECC1LQ69YQ0 1117 aa3.75□□□□□ -1.81
PCNX1-205ENST00000553508 UNC5DQ6UXZ4 953 aa3.75□□□□□ -1.81
PCNX1-205ENST00000553508 SAXO1Q8IYX7 474 aa3.75□□□□□ -1.81
PCNX1-205ENST00000553508 TPRX1Q8N7U7 411 aa3.75□□□□□ -1.81
PCNX1-205ENST00000553508 NKAPP1Q8N9T2 125 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms