RNA–Protein interactions for RNA: ENST00000553256.5

PTCH1-227, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-227ENST00000553256 LYNX1P0DP58 116 aa16.45■□□□□ 0.22
PTCH1-227ENST00000553256 CCNOP22674 350 aa16.45■□□□□ 0.22
PTCH1-227ENST00000553256 COL8A2P25067 703 aa16.45■□□□□ 0.22
PTCH1-227ENST00000553256 MRPS11P82912 194 aaKnown RBP16.45■□□□□ 0.22
PTCH1-227ENST00000553256 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.45■□□□□ 0.22
PTCH1-227ENST00000553256 SLC35F1Q5T1Q4 408 aa16.45■□□□□ 0.22
PTCH1-227ENST00000553256 SLC18B1Q6NT16 456 aa16.45■□□□□ 0.22
PTCH1-227ENST00000553256 C1orf174Q8IYL3 243 aa16.45■□□□□ 0.22
PTCH1-227ENST00000553256 OR10G2Q8NGC3 310 aa16.45■□□□□ 0.22
PTCH1-227ENST00000553256 UBASH3BQ8TF42 649 aa16.45■□□□□ 0.22
PTCH1-227ENST00000553256 IPCEF1Q8WWN9 437 aaPredicted RBP16.45■□□□□ 0.22
PTCH1-227ENST00000553256 YIPF5Q969M3 257 aa16.45■□□□□ 0.22
PTCH1-227ENST00000553256 LRGUKQ96M69 825 aa16.45■□□□□ 0.22
PTCH1-227ENST00000553256 FEVQ99581 238 aa16.45■□□□□ 0.22
PTCH1-227ENST00000553256 OR2J1Q9GZK6 312 aa16.45■□□□□ 0.22
PTCH1-227ENST00000553256 CYB5R1Q9UHQ9 305 aa16.45■□□□□ 0.22
PTCH1-227ENST00000553256 DOK2O60496 412 aa16.44■□□□□ 0.22
PTCH1-227ENST00000553256 CST1P01037 141 aa16.44■□□□□ 0.22
PTCH1-227ENST00000553256 ADH4P08319 380 aa16.44■□□□□ 0.22
PTCH1-227ENST00000553256 IGHV4-31P0DP07 118 aa16.44■□□□□ 0.22
PTCH1-227ENST00000553256 HOXB6P17509 224 aaKnown RBP16.44■□□□□ 0.22
PTCH1-227ENST00000553256 GSTM3P21266 225 aa16.44■□□□□ 0.22
PTCH1-227ENST00000553256 MAGEB1P43366 347 aa16.44■□□□□ 0.22
PTCH1-227ENST00000553256 FLOT2Q14254 428 aa16.44■□□□□ 0.22
PTCH1-227ENST00000553256 ALKBH6Q3KRA9 238 aa16.44■□□□□ 0.22
PTCH1-227ENST00000553256 SPATA46Q5T0L3 261 aa16.44■□□□□ 0.22
PTCH1-227ENST00000553256 DNM1P34Q6PK57 102 aa16.44■□□□□ 0.22
PTCH1-227ENST00000553256 COLCA1Q6ZS62 124 aa16.44■□□□□ 0.22
PTCH1-227ENST00000553256 JAZF1Q86VZ6 243 aa16.44■□□□□ 0.22
PTCH1-227ENST00000553256 SLC37A3Q8NCC5 494 aa16.44■□□□□ 0.22
PTCH1-227ENST00000553256 OR1F12Q8NHA8 337 aa16.44■□□□□ 0.22
PTCH1-227ENST00000553256 PIMREGQ9BSJ6 248 aa16.44■□□□□ 0.22
PTCH1-227ENST00000553256 SOX7Q9BT81 388 aa16.44■□□□□ 0.22
PTCH1-227ENST00000553256 RERGLQ9H628 205 aa16.44■□□□□ 0.22
PTCH1-227ENST00000553256 HINT3Q9NQE9 182 aaKnown RBP16.44■□□□□ 0.22
PTCH1-227ENST00000553256 SLCO1C1Q9NYB5 712 aa16.44■□□□□ 0.22
PTCH1-227ENST00000553256 TLX2O43763 284 aaPredicted RBP16.43■□□□□ 0.22
PTCH1-227ENST00000553256 FKBP6O75344 327 aa16.43■□□□□ 0.22
PTCH1-227ENST00000553256 SOX14O95416 240 aa16.43■□□□□ 0.22
PTCH1-227ENST00000553256 RENP00797 406 aa16.43■□□□□ 0.22
PTCH1-227ENST00000553256 DBHP09172 617 aa16.43■□□□□ 0.22
PTCH1-227ENST00000553256 HTR5AP47898 357 aa16.43■□□□□ 0.22
PTCH1-227ENST00000553256 PPP1CBP62140 327 aa16.43■□□□□ 0.22
PTCH1-227ENST00000553256 TEKQ02763 1124 aa16.43■□□□□ 0.22
PTCH1-227ENST00000553256 GLO1Q04760 184 aa16.43■□□□□ 0.22
PTCH1-227ENST00000553256 PCK2Q16822 640 aa16.43■□□□□ 0.22
PTCH1-227ENST00000553256 CFAP77Q6ZQR2 320 aa16.43■□□□□ 0.22
PTCH1-227ENST00000553256 HS3ST5Q8IZT8 346 aa16.43■□□□□ 0.22
PTCH1-227ENST00000553256 CYB561A3Q8NBI2 242 aa16.43■□□□□ 0.22
PTCH1-227ENST00000553256 OR10S1Q8NGN2 331 aa16.43■□□□□ 0.22
PTCH1-227ENST00000553256 ABHD4Q8TB40 342 aa16.43■□□□□ 0.22
PTCH1-227ENST00000553256 UTP4Q969X6 686 aaKnown RBP16.43■□□□□ 0.22
PTCH1-227ENST00000553256 C1orf159Q96HA4 380 aa16.43■□□□□ 0.22
PTCH1-227ENST00000553256 COQ7Q99807 217 aa16.43■□□□□ 0.22
PTCH1-227ENST00000553256 TSSK6Q9BXA6 273 aa16.43■□□□□ 0.22
PTCH1-227ENST00000553256 ARMC1Q9NVT9 282 aa16.43■□□□□ 0.22
PTCH1-227ENST00000553256 PLEK2Q9NYT0 353 aa16.43■□□□□ 0.22
PTCH1-227ENST00000553256 EIF3KQ9UBQ5 218 aaKnown RBP16.43■□□□□ 0.22
PTCH1-227ENST00000553256 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.43■□□□□ 0.22
PTCH1-227ENST00000553256 A0A1W2PPW3 197 aa16.42■□□□□ 0.22
PTCH1-227ENST00000553256 ZSCAN5BA6NJL1 495 aa16.42■□□□□ 0.22
PTCH1-227ENST00000553256 ZNF23P17027 643 aa16.42■□□□□ 0.22
PTCH1-227ENST00000553256 TUBG1P23258 451 aa16.42■□□□□ 0.22
PTCH1-227ENST00000553256 NOS3P29474 1203 aa16.42■□□□□ 0.22
PTCH1-227ENST00000553256 PSG7Q13046 419 aa16.42■□□□□ 0.22
PTCH1-227ENST00000553256 ZNF718Q3SXZ3 478 aa16.42■□□□□ 0.22
PTCH1-227ENST00000553256 C6orf52Q5T4I8 152 aa16.42■□□□□ 0.22
PTCH1-227ENST00000553256 LINC01590Q5TEZ4 76 aa16.42■□□□□ 0.22
PTCH1-227ENST00000553256 CORO6Q6QEF8 472 aa16.42■□□□□ 0.22
PTCH1-227ENST00000553256 LYPD4Q6UWN0 246 aa16.42■□□□□ 0.22
PTCH1-227ENST00000553256 GJC3Q8NFK1 279 aa16.42■□□□□ 0.22
PTCH1-227ENST00000553256 OR52L1Q8NGH7 329 aa16.42■□□□□ 0.22
PTCH1-227ENST00000553256 GIPC3Q8TF64 312 aa16.42■□□□□ 0.22
PTCH1-227ENST00000553256 MAP6Q96JE9 813 aa16.42■□□□□ 0.22
PTCH1-227ENST00000553256 TUBG2Q9NRH3 451 aa16.42■□□□□ 0.22
PTCH1-227ENST00000553256 BAIAP2Q9UQB8 552 aa16.42■□□□□ 0.22
PTCH1-227ENST00000553256 STARD10Q9Y365 291 aa16.42■□□□□ 0.22
PTCH1-227ENST00000553256 MALRD1Q5VYJ5 2156 aa16.41■□□□□ 0.22
PTCH1-227ENST00000553256 J3QW42 95 aa16.41■□□□□ 0.22
PTCH1-227ENST00000553256 ERCC1P07992 297 aaPredicted RBP16.41■□□□□ 0.22
PTCH1-227ENST00000553256 KITLGP21583 273 aa16.41■□□□□ 0.22
PTCH1-227ENST00000553256 SLC25A1P53007 311 aa16.41■□□□□ 0.22
PTCH1-227ENST00000553256 CRMP1Q14194 572 aa16.41■□□□□ 0.22
PTCH1-227ENST00000553256 TRIP10Q15642 601 aa16.41■□□□□ 0.22
PTCH1-227ENST00000553256 PRIMA1Q86XR5 153 aa16.41■□□□□ 0.22
PTCH1-227ENST00000553256 ZNF540Q8NDQ6 660 aa16.41■□□□□ 0.22
PTCH1-227ENST00000553256 OR2T33Q8NG76 320 aa16.41■□□□□ 0.22
PTCH1-227ENST00000553256 RDH5Q92781 318 aa16.41■□□□□ 0.22
PTCH1-227ENST00000553256 DCLRE1CQ96SD1 692 aaKnown RBP16.41■□□□□ 0.22
PTCH1-227ENST00000553256 HDHD2Q9H0R4 259 aa16.41■□□□□ 0.22
PTCH1-227ENST00000553256 ELOVL3Q9HB03 270 aa16.41■□□□□ 0.22
PTCH1-227ENST00000553256 DNAJB9Q9UBS3 223 aa16.41■□□□□ 0.22
PTCH1-227ENST00000553256 CRLF1O75462 422 aa16.4■□□□□ 0.22
PTCH1-227ENST00000553256 ABHD16AO95870 558 aa16.4■□□□□ 0.22
PTCH1-227ENST00000553256 IGHV1-46P01743 117 aa16.4■□□□□ 0.22
PTCH1-227ENST00000553256 ACHEP22303 614 aa16.4■□□□□ 0.22
PTCH1-227ENST00000553256 ANOS1P23352 680 aa16.4■□□□□ 0.22
PTCH1-227ENST00000553256 IL2RGP31785 369 aa16.4■□□□□ 0.22
PTCH1-227ENST00000553256 PYCR1P32322 319 aa16.4■□□□□ 0.22
PTCH1-227ENST00000553256 ERFP50548 548 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms