RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 GAAP10253 952 aa8.88□□□□□ -0.99
TRAFD1-208ENST00000552890 ZNF250P15622 560 aa8.88□□□□□ -0.99
TRAFD1-208ENST00000552890 CCNOP22674 350 aa8.88□□□□□ -0.99
TRAFD1-208ENST00000552890 APEX1P27695 318 aaKnown RBP8.88□□□□□ -0.99
TRAFD1-208ENST00000552890 ERFP50548 548 aa8.88□□□□□ -0.99
TRAFD1-208ENST00000552890 ATP5J2P56134 94 aa8.88□□□□□ -0.99
TRAFD1-208ENST00000552890 RPS7P62081 194 aaKnown RBP8.88□□□□□ -0.99
TRAFD1-208ENST00000552890 HIST1H3AP68431 136 aa8.88□□□□□ -0.99
TRAFD1-208ENST00000552890 NKX6-1P78426 367 aaPredicted RBP8.88□□□□□ -0.99
TRAFD1-208ENST00000552890 PCK2Q16822 640 aa8.88□□□□□ -0.99
TRAFD1-208ENST00000552890 HIST2H3PS2Q5TEC6 136 aa8.88□□□□□ -0.99
TRAFD1-208ENST00000552890 NXNL2Q5VZ03 156 aa8.88□□□□□ -0.99
TRAFD1-208ENST00000552890 SLC18B1Q6NT16 456 aa8.88□□□□□ -0.99
TRAFD1-208ENST00000552890 DEGS2Q6QHC5 323 aa8.88□□□□□ -0.99
TRAFD1-208ENST00000552890 HIST2H3AQ71DI3 136 aa8.88□□□□□ -0.99
TRAFD1-208ENST00000552890 CXXC5Q7LFL8 322 aaKnown RBP8.88□□□□□ -0.99
TRAFD1-208ENST00000552890 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.88□□□□□ -0.99
TRAFD1-208ENST00000552890 CYB561A3Q8NBI2 242 aa8.88□□□□□ -0.99
TRAFD1-208ENST00000552890 ZNF555Q8NEP9 628 aa8.88□□□□□ -0.99
TRAFD1-208ENST00000552890 OR8D4Q8NGM9 314 aa8.88□□□□□ -0.99
TRAFD1-208ENST00000552890 SYNPRQ8TBG9 265 aa8.88□□□□□ -0.99
TRAFD1-208ENST00000552890 MRPL24Q96A35 216 aaKnown RBP8.88□□□□□ -0.99
TRAFD1-208ENST00000552890 C4orf45Q96LM5 186 aa8.88□□□□□ -0.99
TRAFD1-208ENST00000552890 DDOQ99489 341 aa8.88□□□□□ -0.99
TRAFD1-208ENST00000552890 CIB1Q99828 191 aa8.88□□□□□ -0.99
TRAFD1-208ENST00000552890 ATF6BQ99941 703 aa8.88□□□□□ -0.99
TRAFD1-208ENST00000552890 WNT5BQ9H1J7 359 aa8.88□□□□□ -0.99
TRAFD1-208ENST00000552890 SEMA6AQ9H2E6 1030 aa8.88□□□□□ -0.99
TRAFD1-208ENST00000552890 DYNLRB1Q9NP97 96 aa8.88□□□□□ -0.99
TRAFD1-208ENST00000552890 TVP23BQ9NYZ1 205 aa8.88□□□□□ -0.99
TRAFD1-208ENST00000552890 WARS2Q9UGM6 360 aaKnown RBP8.88□□□□□ -0.99
TRAFD1-208ENST00000552890 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.88□□□□□ -0.99
TRAFD1-208ENST00000552890 NBPF19A0A087WUL8 3843 aa8.88□□□□□ -0.99
TRAFD1-208ENST00000552890 PRR14LQ5THK1 2151 aa8.88□□□□□ -0.99
TRAFD1-208ENST00000552890 LRBAP50851 2863 aa8.87□□□□□ -0.99
TRAFD1-208ENST00000552890 IGKV1D-43A0A0B4J1Z2 117 aa8.87□□□□□ -0.99
TRAFD1-208ENST00000552890 ACOD1A6NK06 481 aa8.87□□□□□ -0.99
TRAFD1-208ENST00000552890 SAC3D1A6NKF1 404 aa8.87□□□□□ -0.99
TRAFD1-208ENST00000552890 ZNF878C9JN71 531 aa8.87□□□□□ -0.99
TRAFD1-208ENST00000552890 H3BNX3 289 aa8.87□□□□□ -0.99
TRAFD1-208ENST00000552890 M0R233 179 aa8.87□□□□□ -0.99
TRAFD1-208ENST00000552890 ZNF593O00488 134 aaPredicted RBP8.87□□□□□ -0.99
TRAFD1-208ENST00000552890 PLAUP00749 431 aa8.87□□□□□ -0.99
TRAFD1-208ENST00000552890 TP53P04637 393 aaPredicted RBP8.87□□□□□ -0.99
TRAFD1-208ENST00000552890 FOSL1P15407 271 aa8.87□□□□□ -0.99
TRAFD1-208ENST00000552890 TNFSF4P23510 183 aa8.87□□□□□ -0.99
TRAFD1-208ENST00000552890 EFNA4P52798 201 aa8.87□□□□□ -0.99
TRAFD1-208ENST00000552890 KRTAP10-9P60411 292 aa8.87□□□□□ -0.99
TRAFD1-208ENST00000552890 MZT1Q08AG7 82 aa8.87□□□□□ -0.99
TRAFD1-208ENST00000552890 ADIPOQQ15848 244 aa8.87□□□□□ -0.99
TRAFD1-208ENST00000552890 KLHL12Q53G59 568 aa8.87□□□□□ -0.99
TRAFD1-208ENST00000552890 SLC25A30Q5SVS4 291 aa8.87□□□□□ -0.99
TRAFD1-208ENST00000552890 ZNF362Q5T0B9 420 aaPredicted RBP8.87□□□□□ -0.99
TRAFD1-208ENST00000552890 MBNL2Q5VZF2 373 aaKnown RBP8.87□□□□□ -0.99
TRAFD1-208ENST00000552890 TTC23Q5W5X9 447 aa8.87□□□□□ -0.99
TRAFD1-208ENST00000552890 KRT80Q6KB66 452 aa8.87□□□□□ -0.99
TRAFD1-208ENST00000552890 ACSM5Q6NUN0 579 aa8.87□□□□□ -0.99
TRAFD1-208ENST00000552890 ZNF774Q6NX45 483 aa8.87□□□□□ -0.99
TRAFD1-208ENST00000552890 DRAM2Q6UX65 266 aa8.87□□□□□ -0.99
TRAFD1-208ENST00000552890 VASH1Q7L8A9 365 aaPredicted RBP8.87□□□□□ -0.99
TRAFD1-208ENST00000552890 ZNF584Q8IVC4 421 aa8.87□□□□□ -0.99
TRAFD1-208ENST00000552890 CPOQ8IVL8 374 aa8.87□□□□□ -0.99
TRAFD1-208ENST00000552890 FTMTQ8N4E7 242 aa8.87□□□□□ -0.99
TRAFD1-208ENST00000552890 OR52H1Q8NGJ2 320 aa8.87□□□□□ -0.99
TRAFD1-208ENST00000552890 OR4Q3Q8NH05 313 aa8.87□□□□□ -0.99
TRAFD1-208ENST00000552890 LILRB1Q8NHL6 650 aaPredicted RBP8.87□□□□□ -0.99
TRAFD1-208ENST00000552890 TMEM163Q8TC26 289 aa8.87□□□□□ -0.99
TRAFD1-208ENST00000552890 PTP4A1Q93096 173 aa8.87□□□□□ -0.99
TRAFD1-208ENST00000552890 MS4A3Q96HJ5 214 aa8.87□□□□□ -0.99
TRAFD1-208ENST00000552890 HRASLS5Q96KN8 279 aa8.87□□□□□ -0.99
TRAFD1-208ENST00000552890 TSSK2Q96PF2 358 aa8.87□□□□□ -0.99
TRAFD1-208ENST00000552890 PKP2Q99959 881 aa8.87□□□□□ -0.99
TRAFD1-208ENST00000552890 APOL4Q9BPW4 351 aa8.87□□□□□ -0.99
TRAFD1-208ENST00000552890 HCAR1Q9BXC0 346 aa8.87□□□□□ -0.99
TRAFD1-208ENST00000552890 SLC22A4Q9H015 551 aa8.87□□□□□ -0.99
TRAFD1-208ENST00000552890 OR51V1Q9H2C8 321 aa8.87□□□□□ -0.99
TRAFD1-208ENST00000552890 MARCH7Q9H992 704 aa8.87□□□□□ -0.99
TRAFD1-208ENST00000552890 EMC7Q9NPA0 242 aa8.87□□□□□ -0.99
TRAFD1-208ENST00000552890 DDX28Q9NUL7 540 aaKnown RBP8.87□□□□□ -0.99
TRAFD1-208ENST00000552890 HAO2Q9NYQ3 351 aa8.87□□□□□ -0.99
TRAFD1-208ENST00000552890 GDF2Q9UK05 429 aaPredicted RBP8.87□□□□□ -0.99
TRAFD1-208ENST00000552890 A0A1W2PPW3 197 aa8.86□□□□□ -0.99
TRAFD1-208ENST00000552890 IFNL4K9M1U5 179 aa8.86□□□□□ -0.99
TRAFD1-208ENST00000552890 NDUFS8O00217 210 aa8.86□□□□□ -0.99
TRAFD1-208ENST00000552890 DCTN6O00399 190 aa8.86□□□□□ -0.99
TRAFD1-208ENST00000552890 EI24O14681 340 aa8.86□□□□□ -0.99
TRAFD1-208ENST00000552890 TLX2O43763 284 aaPredicted RBP8.86□□□□□ -0.99
TRAFD1-208ENST00000552890 ZNF254O75437 659 aa8.86□□□□□ -0.99
TRAFD1-208ENST00000552890 F12P00748 615 aaPredicted RBP8.86□□□□□ -0.99
TRAFD1-208ENST00000552890 TFP02787 698 aa8.86□□□□□ -0.99
TRAFD1-208ENST00000552890 RAC2P15153 192 aa8.86□□□□□ -0.99
TRAFD1-208ENST00000552890 HSD11B1P28845 292 aa8.86□□□□□ -0.99
TRAFD1-208ENST00000552890 CALCRP30988 508 aa8.86□□□□□ -0.99
TRAFD1-208ENST00000552890 THBS4P35443 961 aa8.86□□□□□ -0.99
TRAFD1-208ENST00000552890 ATP6V1E1P36543 226 aa8.86□□□□□ -0.99
TRAFD1-208ENST00000552890 DDOSTP39656 456 aa8.86□□□□□ -0.99
TRAFD1-208ENST00000552890 PTH2RP49190 550 aa8.86□□□□□ -0.99
TRAFD1-208ENST00000552890 PPP1CBP62140 327 aa8.86□□□□□ -0.99
TRAFD1-208ENST00000552890 MRPS11P82912 194 aaKnown RBP8.86□□□□□ -0.99
TRAFD1-208ENST00000552890 HGFACQ04756 655 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms