RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 RGS9O75916 674 aaPredicted RBP10.07□□□□□ -0.8
CKAP4-202ENST00000552828 MPZL1O95297 269 aa10.07□□□□□ -0.8
CKAP4-202ENST00000552828 FARS2O95363 451 aaKnown RBP10.07□□□□□ -0.8
CKAP4-202ENST00000552828 PTHP01270 115 aa10.07□□□□□ -0.8
CKAP4-202ENST00000552828 GASTP01350 101 aa10.07□□□□□ -0.8
CKAP4-202ENST00000552828 IGHV3-13P01766 116 aa10.07□□□□□ -0.8
CKAP4-202ENST00000552828 IGHV2-5P01817 119 aa10.07□□□□□ -0.8
CKAP4-202ENST00000552828 FAM157BP0CG42 384 aa10.07□□□□□ -0.8
CKAP4-202ENST00000552828 CCL2P13500 99 aa10.07□□□□□ -0.8
CKAP4-202ENST00000552828 ZNF26P17031 533 aaPredicted RBP10.07□□□□□ -0.8
CKAP4-202ENST00000552828 GATA3P23771 443 aa10.07□□□□□ -0.8
CKAP4-202ENST00000552828 SLC6A6P31641 620 aa10.07□□□□□ -0.8
CKAP4-202ENST00000552828 ZNF84P51523 738 aa10.07□□□□□ -0.8
CKAP4-202ENST00000552828 RPS6KA3P51812 740 aa10.07□□□□□ -0.8
CKAP4-202ENST00000552828 CD47Q08722 323 aa10.07□□□□□ -0.8
CKAP4-202ENST00000552828 TUSC1Q2TAM9 212 aa10.07□□□□□ -0.8
CKAP4-202ENST00000552828 RFX4Q33E94 735 aa10.07□□□□□ -0.8
CKAP4-202ENST00000552828 ALKBH6Q3KRA9 238 aa10.07□□□□□ -0.8
CKAP4-202ENST00000552828 SLC36A2Q495M3 483 aa10.07□□□□□ -0.8
CKAP4-202ENST00000552828 THEM4Q5T1C6 240 aa10.07□□□□□ -0.8
CKAP4-202ENST00000552828 GPR139Q6DWJ6 353 aa10.07□□□□□ -0.8
CKAP4-202ENST00000552828 ZNF770Q6IQ21 691 aaPredicted RBP10.07□□□□□ -0.8
CKAP4-202ENST00000552828 TMEM53Q6P2H8 277 aa10.07□□□□□ -0.8
CKAP4-202ENST00000552828 DPY19L2P2Q6ZN68 376 aa10.07□□□□□ -0.8
CKAP4-202ENST00000552828 AQP11Q8NBQ7 271 aa10.07□□□□□ -0.8
CKAP4-202ENST00000552828 OR9Q2Q8NGE9 314 aa10.07□□□□□ -0.8
CKAP4-202ENST00000552828 OR1J2Q8NGS2 313 aa10.07□□□□□ -0.8
CKAP4-202ENST00000552828 FANK1Q8TC84 345 aa10.07□□□□□ -0.8
CKAP4-202ENST00000552828 GIPC3Q8TF64 312 aa10.07□□□□□ -0.8
CKAP4-202ENST00000552828 SNX33Q8WV41 574 aa10.07□□□□□ -0.8
CKAP4-202ENST00000552828 HDAC2Q92769 488 aaKnown RBP10.07□□□□□ -0.8
CKAP4-202ENST00000552828 SLCO4A1Q96BD0 722 aa10.07□□□□□ -0.8
CKAP4-202ENST00000552828 RAB39BQ96DA2 213 aa10.07□□□□□ -0.8
CKAP4-202ENST00000552828 GPX7Q96SL4 187 aaPredicted RBP10.07□□□□□ -0.8
CKAP4-202ENST00000552828 NRIP3Q9NQ35 241 aa10.07□□□□□ -0.8
CKAP4-202ENST00000552828 DNAJB9Q9UBS3 223 aa10.07□□□□□ -0.8
CKAP4-202ENST00000552828 ADAM18Q9Y3Q7 739 aa10.07□□□□□ -0.8
CKAP4-202ENST00000552828 AHCYL1O43865 530 aa10.06□□□□□ -0.8
CKAP4-202ENST00000552828 FSHBP01225 129 aa10.06□□□□□ -0.8
CKAP4-202ENST00000552828 LCKP06239 509 aa10.06□□□□□ -0.8
CKAP4-202ENST00000552828 MMP7P09237 267 aaPredicted RBP10.06□□□□□ -0.8
CKAP4-202ENST00000552828 GSTM3P21266 225 aa10.06□□□□□ -0.8
CKAP4-202ENST00000552828 ARHGDIAP52565 204 aa10.06□□□□□ -0.8
CKAP4-202ENST00000552828 ZNF133P52736 654 aaPredicted RBP10.06□□□□□ -0.8
CKAP4-202ENST00000552828 FXYD6P3P58550 94 aa10.06□□□□□ -0.8
CKAP4-202ENST00000552828 ERVS71-1P61550 626 aa10.06□□□□□ -0.8
CKAP4-202ENST00000552828 MVKQ03426 396 aa10.06□□□□□ -0.8
CKAP4-202ENST00000552828 TBC1D28Q2M2D7 210 aa10.06□□□□□ -0.8
CKAP4-202ENST00000552828 FAM209AQ5JX71 171 aa10.06□□□□□ -0.8
CKAP4-202ENST00000552828 AVPI1Q5T686 147 aa10.06□□□□□ -0.8
CKAP4-202ENST00000552828 RPL13AP3Q6NVV1 102 aa10.06□□□□□ -0.8
CKAP4-202ENST00000552828 SLC16A14Q7RTX9 510 aa10.06□□□□□ -0.8
CKAP4-202ENST00000552828 FAM122BQ7Z309 247 aa10.06□□□□□ -0.8
CKAP4-202ENST00000552828 ZDHHC22Q8N966 263 aa10.06□□□□□ -0.8
CKAP4-202ENST00000552828 OR10G2Q8NGC3 310 aa10.06□□□□□ -0.8
CKAP4-202ENST00000552828 NANPQ8TBE9 248 aa10.06□□□□□ -0.8
CKAP4-202ENST00000552828 UTP4Q969X6 686 aaKnown RBP10.06□□□□□ -0.8
CKAP4-202ENST00000552828 Q96M85 177 aa10.06□□□□□ -0.8
CKAP4-202ENST00000552828 ZNF570Q96NI8 536 aa10.06□□□□□ -0.8
CKAP4-202ENST00000552828 DGCR6LQ9BY27 220 aa10.06□□□□□ -0.8
CKAP4-202ENST00000552828 OR52D1Q9H346 318 aa10.06□□□□□ -0.8
CKAP4-202ENST00000552828 SMURF2Q9HAU4 748 aa10.06□□□□□ -0.8
CKAP4-202ENST00000552828 CDH20Q9HBT6 801 aa10.06□□□□□ -0.8
CKAP4-202ENST00000552828 ESM1Q9NQ30 184 aa10.06□□□□□ -0.8
CKAP4-202ENST00000552828 IL20RAQ9UHF4 553 aa10.06□□□□□ -0.8
CKAP4-202ENST00000552828 OPN4Q9UHM6 478 aa10.06□□□□□ -0.8
CKAP4-202ENST00000552828 WIPI2Q9Y4P8 454 aa10.06□□□□□ -0.8
CKAP4-202ENST00000552828 AP4S1Q9Y587 144 aa10.06□□□□□ -0.8
CKAP4-202ENST00000552828 IER3IP1Q9Y5U9 82 aa10.06□□□□□ -0.8
CKAP4-202ENST00000552828 DYSFO75923 2080 aa10.05□□□□□ -0.8
CKAP4-202ENST00000552828 TEX13CA0A0J9YWL9 993 aa10.05□□□□□ -0.8
CKAP4-202ENST00000552828 IQCMA0A1B0GVH7 501 aa10.05□□□□□ -0.8
CKAP4-202ENST00000552828 ARRDC5A6NEK1 342 aa10.05□□□□□ -0.8
CKAP4-202ENST00000552828 VGLL3A8MV65 326 aa10.05□□□□□ -0.8
CKAP4-202ENST00000552828 CLDN25C9JDP6 229 aa10.05□□□□□ -0.8
CKAP4-202ENST00000552828 IMPA2O14732 288 aa10.05□□□□□ -0.8
CKAP4-202ENST00000552828 TIPRLO75663 272 aa10.05□□□□□ -0.8
CKAP4-202ENST00000552828 TXNDC12O95881 172 aa10.05□□□□□ -0.8
CKAP4-202ENST00000552828 MT-ND5P03915 603 aa10.05□□□□□ -0.8
CKAP4-202ENST00000552828 SDHAP31040 664 aa10.05□□□□□ -0.8
CKAP4-202ENST00000552828 PLP2Q04941 152 aa10.05□□□□□ -0.8
CKAP4-202ENST00000552828 COX10Q12887 443 aa10.05□□□□□ -0.8
CKAP4-202ENST00000552828 HFEQ30201 348 aa10.05□□□□□ -0.8
CKAP4-202ENST00000552828 AWAT1Q58HT5 328 aa10.05□□□□□ -0.8
CKAP4-202ENST00000552828 PRR31Q5SQ13 230 aa10.05□□□□□ -0.8
CKAP4-202ENST00000552828 C10orf128Q5T292 105 aa10.05□□□□□ -0.8
CKAP4-202ENST00000552828 DCAF12L2Q5VW00 463 aa10.05□□□□□ -0.8
CKAP4-202ENST00000552828 ZNF620Q6ZNG0 422 aa10.05□□□□□ -0.8
CKAP4-202ENST00000552828 RASSF6Q6ZTQ3 369 aa10.05□□□□□ -0.8
CKAP4-202ENST00000552828 USP51Q70EK9 711 aa10.05□□□□□ -0.8
CKAP4-202ENST00000552828 CPEB3Q8NE35 698 aaKnown RBP10.05□□□□□ -0.8
CKAP4-202ENST00000552828 OR52L1Q8NGH7 329 aa10.05□□□□□ -0.8
CKAP4-202ENST00000552828 NSMAFQ92636 917 aa10.05□□□□□ -0.8
CKAP4-202ENST00000552828 GTF3AQ92664 365 aaKnown RBP10.05□□□□□ -0.8
CKAP4-202ENST00000552828 RAB1CQ92928 201 aa10.05□□□□□ -0.8
CKAP4-202ENST00000552828 DVL3Q92997 716 aaPredicted RBP10.05□□□□□ -0.8
CKAP4-202ENST00000552828 NMD3Q96D46 503 aaKnown RBP10.05□□□□□ -0.8
CKAP4-202ENST00000552828 DUS3LQ96G46 650 aaKnown RBP10.05□□□□□ -0.8
CKAP4-202ENST00000552828 TIMD4Q96H15 378 aa10.05□□□□□ -0.8
CKAP4-202ENST00000552828 SAMD8Q96LT4 415 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms