RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, human

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNB3-223	ENST00000552480	DDX28	Q9NUL7	540 aa	Known RBP	11.18	□□□□□ -0.62
CACNB3-223	ENST00000552480	FAM206A	Q9NX38	181 aa		11.18	□□□□□ -0.62
CACNB3-223	ENST00000552480	OR52A1	Q9UKL2	312 aa		11.18	□□□□□ -0.62
CACNB3-223	ENST00000552480	CLEC4A	Q9UMR7	237 aa		11.18	□□□□□ -0.62
CACNB3-223	ENST00000552480	LHX6	Q9UPM6	363 aa		11.18	□□□□□ -0.62
CACNB3-223	ENST00000552480	SLC22A13	Q9Y226	551 aa		11.18	□□□□□ -0.62
CACNB3-223	ENST00000552480	EMC9	Q9Y3B6	208 aa		11.18	□□□□□ -0.62
CACNB3-223	ENST00000552480	TRBV5-7	A0A0A0MS05	114 aa		11.17	□□□□□ -0.62
CACNB3-223	ENST00000552480	TMEM269	A0A1B0GVZ9	245 aa		11.17	□□□□□ -0.62
CACNB3-223	ENST00000552480	OR14I1	A6ND48	311 aa		11.17	□□□□□ -0.62
CACNB3-223	ENST00000552480	RER1	O15258	196 aa		11.17	□□□□□ -0.62
CACNB3-223	ENST00000552480	TGM6	O95932	706 aa		11.17	□□□□□ -0.62
CACNB3-223	ENST00000552480	OCM2	P0CE71	109 aa		11.17	□□□□□ -0.62
CACNB3-223	ENST00000552480	BMP4	P12644	408 aa		11.17	□□□□□ -0.62
CACNB3-223	ENST00000552480	AGTR1	P30556	359 aa		11.17	□□□□□ -0.62
CACNB3-223	ENST00000552480	PSMA6	P60900	246 aa	Known RBP	11.17	□□□□□ -0.62
CACNB3-223	ENST00000552480	TAF13	Q15543	124 aa		11.17	□□□□□ -0.62
CACNB3-223	ENST00000552480	NRN1L	Q496H8	165 aa		11.17	□□□□□ -0.62
CACNB3-223	ENST00000552480	BCL2L15	Q5TBC7	163 aa		11.17	□□□□□ -0.62
CACNB3-223	ENST00000552480	ZNF704	Q6ZNC4	412 aa	Predicted RBP	11.17	□□□□□ -0.62
CACNB3-223	ENST00000552480	ZC3HAV1	Q7Z2W4	902 aa	Known RBP	11.17	□□□□□ -0.62
CACNB3-223	ENST00000552480	P4HA3	Q7Z4N8	544 aa		11.17	□□□□□ -0.62
CACNB3-223	ENST00000552480	CROCCP3	Q8IVE0	287 aa		11.17	□□□□□ -0.62
CACNB3-223	ENST00000552480	LRRC18	Q8N456	261 aa		11.17	□□□□□ -0.62
CACNB3-223	ENST00000552480	BORCS5	Q969J3	196 aa		11.17	□□□□□ -0.62
CACNB3-223	ENST00000552480	APH1A	Q96BI3	265 aa		11.17	□□□□□ -0.62
CACNB3-223	ENST00000552480	ABHD17A	Q96GS6	310 aa		11.17	□□□□□ -0.62
CACNB3-223	ENST00000552480	GMPPA	Q96IJ6	420 aa	Predicted RBP	11.17	□□□□□ -0.62
CACNB3-223	ENST00000552480	NOX4	Q9NPH5	578 aa		11.17	□□□□□ -0.62
CACNB3-223	ENST00000552480	SLC7A10	Q9NS82	523 aa		11.17	□□□□□ -0.62
CACNB3-223	ENST00000552480	SMIM30	A4D0T7	59 aa		11.16	□□□□□ -0.62
CACNB3-223	ENST00000552480	ACOD1	A6NK06	481 aa		11.16	□□□□□ -0.62
CACNB3-223	ENST00000552480	ZNF587B	E7ETH6	402 aa		11.16	□□□□□ -0.62
CACNB3-223	ENST00000552480	PDCD5	O14737	125 aa		11.16	□□□□□ -0.62
CACNB3-223	ENST00000552480	PIN1P1	O15428	100 aa		11.16	□□□□□ -0.62
CACNB3-223	ENST00000552480	SS18L1	O75177	396 aa	Predicted RBP	11.16	□□□□□ -0.62
CACNB3-223	ENST00000552480	NCR1	O76036	304 aa		11.16	□□□□□ -0.62
CACNB3-223	ENST00000552480	WISP2	O76076	250 aa		11.16	□□□□□ -0.62
CACNB3-223	ENST00000552480	RAF1	P04049	648 aa		11.16	□□□□□ -0.62
CACNB3-223	ENST00000552480	ISG15	P05161	165 aa		11.16	□□□□□ -0.62
CACNB3-223	ENST00000552480	ADRB1	P08588	477 aa		11.16	□□□□□ -0.62
CACNB3-223	ENST00000552480	UBC	P0CG48	685 aa	Known RBP	11.16	□□□□□ -0.62
CACNB3-223	ENST00000552480	RAB3B	P20337	219 aa		11.16	□□□□□ -0.62
CACNB3-223	ENST00000552480	ACHE	P22303	614 aa		11.16	□□□□□ -0.62
CACNB3-223	ENST00000552480	CTSS	P25774	331 aa		11.16	□□□□□ -0.62
CACNB3-223	ENST00000552480	CAV3	P56539	151 aa		11.16	□□□□□ -0.62
CACNB3-223	ENST00000552480	PCBD1	P61457	104 aa		11.16	□□□□□ -0.62
CACNB3-223	ENST00000552480	ODF4	Q2M2E3	257 aa		11.16	□□□□□ -0.62
CACNB3-223	ENST00000552480	PLEKHN1	Q494U1	663 aa	Predicted RBP	11.16	□□□□□ -0.62
CACNB3-223	ENST00000552480	CCDC92	Q53HC0	331 aa	Predicted RBP	11.16	□□□□□ -0.62
CACNB3-223	ENST00000552480	ELFN2	Q5R3F8	820 aa		11.16	□□□□□ -0.62
CACNB3-223	ENST00000552480	NUFIP2	Q7Z417	695 aa	Known RBP	11.16	□□□□□ -0.62
CACNB3-223	ENST00000552480	SYT9	Q86SS6	491 aa		11.16	□□□□□ -0.62
CACNB3-223	ENST00000552480	ZNF100	Q8IYN0	542 aa		11.16	□□□□□ -0.62
CACNB3-223	ENST00000552480	SLC22A24	Q8N4F4	322 aa		11.16	□□□□□ -0.62
CACNB3-223	ENST00000552480	TSEN15	Q8WW01	171 aa	Known RBP	11.16	□□□□□ -0.62
CACNB3-223	ENST00000552480	FBXO17	Q96EF6	278 aa		11.16	□□□□□ -0.62
CACNB3-223	ENST00000552480	WDFY2	Q96P53	400 aa		11.16	□□□□□ -0.62
CACNB3-223	ENST00000552480	ATF6B	Q99941	703 aa		11.16	□□□□□ -0.62
CACNB3-223	ENST00000552480	WAC	Q9BTA9	647 aa		11.16	□□□□□ -0.62
CACNB3-223	ENST00000552480	NUFIP1	Q9UHK0	495 aa	Known RBP	11.16	□□□□□ -0.62
CACNB3-223	ENST00000552480	TP53TG5	Q9Y2B4	290 aa		11.16	□□□□□ -0.62
CACNB3-223	ENST00000552480	RAX	Q9Y2V3	346 aa		11.16	□□□□□ -0.62
CACNB3-223	ENST00000552480	CMAHP	Q9Y471	501 aa		11.16	□□□□□ -0.62
CACNB3-223	ENST00000552480		A0A0G2JK05	382 aa		11.15	□□□□□ -0.62
CACNB3-223	ENST00000552480		A0A1W2PPK0	400 aa		11.15	□□□□□ -0.62
CACNB3-223	ENST00000552480	ANKRD61	A6NGH8	418 aa		11.15	□□□□□ -0.62
CACNB3-223	ENST00000552480	CTDSP2	O14595	271 aa		11.15	□□□□□ -0.62
CACNB3-223	ENST00000552480	FARS2	O95363	451 aa	Known RBP	11.15	□□□□□ -0.62
CACNB3-223	ENST00000552480	B4GALT1	P15291	398 aa		11.15	□□□□□ -0.62
CACNB3-223	ENST00000552480	SRM	P19623	302 aa		11.15	□□□□□ -0.62
CACNB3-223	ENST00000552480	ETV6	P41212	452 aa		11.15	□□□□□ -0.62
CACNB3-223	ENST00000552480	SOX2	P48431	317 aa		11.15	□□□□□ -0.62
CACNB3-223	ENST00000552480	SCRN3	Q0VDG4	424 aa		11.15	□□□□□ -0.62
CACNB3-223	ENST00000552480	RAB35	Q15286	201 aa		11.15	□□□□□ -0.62
CACNB3-223	ENST00000552480	TMEM244	Q5VVB8	128 aa		11.15	□□□□□ -0.62
CACNB3-223	ENST00000552480	SFXN4	Q6P4A7	337 aa		11.15	□□□□□ -0.62
CACNB3-223	ENST00000552480	MZT2A	Q6P582	158 aa		11.15	□□□□□ -0.62
CACNB3-223	ENST00000552480	ZNF813	Q6ZN06	617 aa		11.15	□□□□□ -0.62
CACNB3-223	ENST00000552480	ZNF627	Q7L945	461 aa		11.15	□□□□□ -0.62
CACNB3-223	ENST00000552480	ABHD12B	Q7Z5M8	362 aa	Predicted RBP	11.15	□□□□□ -0.62
CACNB3-223	ENST00000552480	CCDC190	Q86UF4	302 aa		11.15	□□□□□ -0.62
CACNB3-223	ENST00000552480	NR2C2AP	Q86WQ0	139 aa		11.15	□□□□□ -0.62
CACNB3-223	ENST00000552480	ELMOD2	Q8IZ81	293 aa		11.15	□□□□□ -0.62
CACNB3-223	ENST00000552480	RDH10	Q8IZV5	341 aa		11.15	□□□□□ -0.62
CACNB3-223	ENST00000552480	OR10AC1	Q8NH08	325 aa		11.15	□□□□□ -0.62
CACNB3-223	ENST00000552480	SNRNP27	Q8WVK2	155 aa	Known RBP	11.15	□□□□□ -0.62
CACNB3-223	ENST00000552480	ACOT12	Q8WYK0	555 aa		11.15	□□□□□ -0.62
CACNB3-223	ENST00000552480	EXTL1	Q92935	676 aa		11.15	□□□□□ -0.62
CACNB3-223	ENST00000552480	PPP1R14A	Q96A00	147 aa		11.15	□□□□□ -0.62
CACNB3-223	ENST00000552480	KCTD12	Q96CX2	325 aa	Known RBP	11.15	□□□□□ -0.62
CACNB3-223	ENST00000552480	CEP19	Q96LK0	163 aa		11.15	□□□□□ -0.62
CACNB3-223	ENST00000552480	GPR137	Q96N19	417 aa		11.15	□□□□□ -0.62
CACNB3-223	ENST00000552480	TRIB1	Q96RU8	372 aa		11.15	□□□□□ -0.62
CACNB3-223	ENST00000552480	KCNJ15	Q99712	375 aa		11.15	□□□□□ -0.62
CACNB3-223	ENST00000552480	SH3GL3	Q99963	347 aa		11.15	□□□□□ -0.62
CACNB3-223	ENST00000552480	PBOV1	Q9GZY1	135 aa		11.15	□□□□□ -0.62
CACNB3-223	ENST00000552480	HDHD2	Q9H0R4	259 aa		11.15	□□□□□ -0.62
CACNB3-223	ENST00000552480	SLITRK2	Q9H156	845 aa		11.15	□□□□□ -0.62
CACNB3-223	ENST00000552480	UPB1	Q9UBR1	384 aa		11.15	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 34 ms