RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 BAG5Q9UL15 447 aa11.88□□□□□ -0.51
CHMP1A-210ENST00000551981 HIF3AQ9Y2N7 669 aa11.88□□□□□ -0.51
CHMP1A-210ENST00000551981 KIR2DS1A0A191URI9 304 aa11.87□□□□□ -0.51
CHMP1A-210ENST00000551981 HTR3EA5X5Y0 456 aa11.87□□□□□ -0.51
CHMP1A-210ENST00000551981 DOK2O60496 412 aa11.87□□□□□ -0.51
CHMP1A-210ENST00000551981 NDUFA7O95182 113 aa11.87□□□□□ -0.51
CHMP1A-210ENST00000551981 THRBP10828 461 aa11.87□□□□□ -0.51
CHMP1A-210ENST00000551981 SRP9P49458 86 aaKnown RBP11.87□□□□□ -0.51
CHMP1A-210ENST00000551981 SRSF4Q08170 494 aaKnown RBP11.87□□□□□ -0.51
CHMP1A-210ENST00000551981 ENDOGQ14249 297 aaKnown RBP11.87□□□□□ -0.51
CHMP1A-210ENST00000551981 VMACQ2NL98 169 aa11.87□□□□□ -0.51
CHMP1A-210ENST00000551981 DEFB112Q30KQ8 113 aa11.87□□□□□ -0.51
CHMP1A-210ENST00000551981 TTMPQ5BVD1 217 aa11.87□□□□□ -0.51
CHMP1A-210ENST00000551981 GPR157Q5UAW9 335 aa11.87□□□□□ -0.51
CHMP1A-210ENST00000551981 FIP1L1Q6UN15 594 aaKnown RBP11.87□□□□□ -0.51
CHMP1A-210ENST00000551981 BRD3OSQ6XYD6 125 aa11.87□□□□□ -0.51
CHMP1A-210ENST00000551981 CCDC80Q76M96 950 aa11.87□□□□□ -0.51
CHMP1A-210ENST00000551981 CLDN22Q8N7P3 220 aa11.87□□□□□ -0.51
CHMP1A-210ENST00000551981 OR8B3Q8NGG8 313 aa11.87□□□□□ -0.51
CHMP1A-210ENST00000551981 PTP4A1Q93096 173 aa11.87□□□□□ -0.51
CHMP1A-210ENST00000551981 UBE2FQ969M7 185 aa11.87□□□□□ -0.51
CHMP1A-210ENST00000551981 OR8B2Q96RD0 313 aa11.87□□□□□ -0.51
CHMP1A-210ENST00000551981 PKP2Q99959 881 aa11.87□□□□□ -0.51
CHMP1A-210ENST00000551981 CITED1Q99966 193 aa11.87□□□□□ -0.51
CHMP1A-210ENST00000551981 SLC30A2Q9BRI3 323 aa11.87□□□□□ -0.51
CHMP1A-210ENST00000551981 TMEM165Q9HC07 324 aa11.87□□□□□ -0.51
CHMP1A-210ENST00000551981 POLE4Q9NR33 117 aa11.87□□□□□ -0.51
CHMP1A-210ENST00000551981 TNFRSF19Q9NS68 423 aa11.87□□□□□ -0.51
CHMP1A-210ENST00000551981 ARMCX1Q9P291 453 aa11.87□□□□□ -0.51
CHMP1A-210ENST00000551981 KIF17Q9P2E2 1029 aa11.87□□□□□ -0.51
CHMP1A-210ENST00000551981 CLPSL1A2RUU4 121 aa11.86□□□□□ -0.51
CHMP1A-210ENST00000551981 SGCEO43556 437 aa11.86□□□□□ -0.51
CHMP1A-210ENST00000551981 RAC2P15153 192 aa11.86□□□□□ -0.51
CHMP1A-210ENST00000551981 PITPNBP48739 271 aa11.86□□□□□ -0.51
CHMP1A-210ENST00000551981 CTXN1P60606 82 aa11.86□□□□□ -0.51
CHMP1A-210ENST00000551981 PIN1Q13526 163 aaPredicted RBP11.86□□□□□ -0.51
CHMP1A-210ENST00000551981 NFYCQ13952 458 aa11.86□□□□□ -0.51
CHMP1A-210ENST00000551981 PDCD1Q15116 288 aa11.86□□□□□ -0.51
CHMP1A-210ENST00000551981 C1orf87Q8N0U7 546 aa11.86□□□□□ -0.51
CHMP1A-210ENST00000551981 TMEM86BQ8N661 226 aa11.86□□□□□ -0.51
CHMP1A-210ENST00000551981 OR10A6Q8NH74 314 aa11.86□□□□□ -0.51
CHMP1A-210ENST00000551981 LRRC8CQ8TDW0 803 aa11.86□□□□□ -0.51
CHMP1A-210ENST00000551981 DACT3Q96B18 629 aaPredicted RBP11.86□□□□□ -0.51
CHMP1A-210ENST00000551981 NUDT16L1Q9BRJ7 211 aaKnown RBP11.86□□□□□ -0.51
CHMP1A-210ENST00000551981 MARCH7Q9H992 704 aa11.86□□□□□ -0.51
CHMP1A-210ENST00000551981 RAB21Q9UL25 225 aa11.86□□□□□ -0.51
CHMP1A-210ENST00000551981 STARD10Q9Y365 291 aa11.86□□□□□ -0.51
CHMP1A-210ENST00000551981 J3QW42 95 aa11.85□□□□□ -0.51
CHMP1A-210ENST00000551981 ZNF205O95201 554 aa11.85□□□□□ -0.51
CHMP1A-210ENST00000551981 FSTL3O95633 263 aa11.85□□□□□ -0.51
CHMP1A-210ENST00000551981 CYB5R3P00387 301 aaPredicted RBP11.85□□□□□ -0.51
CHMP1A-210ENST00000551981 IFNA14P01570 189 aa11.85□□□□□ -0.51
CHMP1A-210ENST00000551981 IFNA8P32881 189 aa11.85□□□□□ -0.51
CHMP1A-210ENST00000551981 CRYBA2P53672 197 aa11.85□□□□□ -0.51
CHMP1A-210ENST00000551981 ZNF404Q494X3 552 aa11.85□□□□□ -0.51
CHMP1A-210ENST00000551981 C1orf94Q6P1W5 598 aa11.85□□□□□ -0.51
CHMP1A-210ENST00000551981 Q6YL49 198 aa11.85□□□□□ -0.51
CHMP1A-210ENST00000551981 IGFN1Q86VF2 1251 aa11.85□□□□□ -0.51
CHMP1A-210ENST00000551981 OR5AS1Q8N127 324 aa11.85□□□□□ -0.51
CHMP1A-210ENST00000551981 OR10AD1Q8NGE0 317 aa11.85□□□□□ -0.51
CHMP1A-210ENST00000551981 OR5L1Q8NGL2 311 aa11.85□□□□□ -0.51
CHMP1A-210ENST00000551981 OR13G1Q8NGZ3 307 aa11.85□□□□□ -0.51
CHMP1A-210ENST00000551981 ZNF420Q8TAQ5 688 aaPredicted RBP11.85□□□□□ -0.51
CHMP1A-210ENST00000551981 TLCD1Q96CP7 247 aa11.85□□□□□ -0.51
CHMP1A-210ENST00000551981 BPIFA2Q96DR5 249 aa11.85□□□□□ -0.51
CHMP1A-210ENST00000551981 FAM71F1Q96KD3 344 aaPredicted RBP11.85□□□□□ -0.51
CHMP1A-210ENST00000551981 MEGF10Q96KG7 1140 aa11.85□□□□□ -0.51
CHMP1A-210ENST00000551981 TMEM246Q9BRR3 403 aa11.85□□□□□ -0.51
CHMP1A-210ENST00000551981 EMC7Q9NPA0 242 aa11.85□□□□□ -0.51
CHMP1A-210ENST00000551981 C1RLQ9NZP8 487 aa11.85□□□□□ -0.51
CHMP1A-210ENST00000551981 CLN8Q9UBY8 286 aa11.85□□□□□ -0.51
CHMP1A-210ENST00000551981 POMT1Q9Y6A1 747 aa11.85□□□□□ -0.51
CHMP1A-210ENST00000551981 PHYHO14832 338 aa11.84□□□□□ -0.51
CHMP1A-210ENST00000551981 PIP5K1CO60331 668 aa11.84□□□□□ -0.51
CHMP1A-210ENST00000551981 IFI30P13284 250 aa11.84□□□□□ -0.51
CHMP1A-210ENST00000551981 IRF2P14316 349 aa11.84□□□□□ -0.51
CHMP1A-210ENST00000551981 TNFRSF1BP20333 461 aa11.84□□□□□ -0.51
CHMP1A-210ENST00000551981 RGS6P49758 472 aa11.84□□□□□ -0.51
CHMP1A-210ENST00000551981 ERFP50548 548 aa11.84□□□□□ -0.51
CHMP1A-210ENST00000551981 RPL15P61313 204 aaKnown RBP11.84□□□□□ -0.51
CHMP1A-210ENST00000551981 FGF12P61328 243 aa11.84□□□□□ -0.51
CHMP1A-210ENST00000551981 AQP6Q13520 282 aa11.84□□□□□ -0.51
CHMP1A-210ENST00000551981 ZNF181Q2M3W8 571 aa11.84□□□□□ -0.51
CHMP1A-210ENST00000551981 ANKDD1AQ495B1 522 aa11.84□□□□□ -0.51
CHMP1A-210ENST00000551981 ZNF620Q6ZNG0 422 aa11.84□□□□□ -0.51
CHMP1A-210ENST00000551981 VASH1Q7L8A9 365 aaPredicted RBP11.84□□□□□ -0.51
CHMP1A-210ENST00000551981 MOGAT3Q86VF5 341 aa11.84□□□□□ -0.51
CHMP1A-210ENST00000551981 FITM2Q8N6M3 262 aa11.84□□□□□ -0.51
CHMP1A-210ENST00000551981 PCYOX1LQ8NBM8 494 aa11.84□□□□□ -0.51
CHMP1A-210ENST00000551981 OR8G5Q8NG78 346 aa11.84□□□□□ -0.51
CHMP1A-210ENST00000551981 RASD2Q96D21 266 aa11.84□□□□□ -0.51
CHMP1A-210ENST00000551981 ZNF582Q96NG8 517 aaPredicted RBP11.84□□□□□ -0.51
CHMP1A-210ENST00000551981 RBM4BQ9BQ04 359 aaKnown RBP11.84□□□□□ -0.51
CHMP1A-210ENST00000551981 CHIAQ9BZP6 476 aa11.84□□□□□ -0.51
CHMP1A-210ENST00000551981 XKRYO14609 159 aa11.83□□□□□ -0.52
CHMP1A-210ENST00000551981 ENSAO43768 121 aaKnown RBP11.83□□□□□ -0.52
CHMP1A-210ENST00000551981 SHOX2O60902 331 aaPredicted RBP11.83□□□□□ -0.52
CHMP1A-210ENST00000551981 SCG5P05408 212 aa11.83□□□□□ -0.52
CHMP1A-210ENST00000551981 MELTFP08582 738 aa11.83□□□□□ -0.52
CHMP1A-210ENST00000551981 RELBQ01201 579 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms