RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 GPR173Q9NS66 373 aa1.97□□□□□ -2.09
CPSF6-207ENST00000551516 HOMER3Q9NSC5 361 aa1.97□□□□□ -2.09
CPSF6-207ENST00000551516 MED17Q9NVC6 651 aa1.97□□□□□ -2.09
CPSF6-207ENST00000551516 FAM120CQ9NX05 1096 aaKnown RBP1.97□□□□□ -2.09
CPSF6-207ENST00000551516 ZNF226Q9NYT6 803 aa1.97□□□□□ -2.09
CPSF6-207ENST00000551516 NUDT4Q9NZJ9 180 aa1.97□□□□□ -2.09
CPSF6-207ENST00000551516 OPN4Q9UHM6 478 aa1.97□□□□□ -2.09
CPSF6-207ENST00000551516 PHF11Q9UIL8 331 aa1.97□□□□□ -2.09
CPSF6-207ENST00000551516 KCNG2Q9UJ96 466 aa1.97□□□□□ -2.09
CPSF6-207ENST00000551516 PRDM4Q9UKN5 801 aa1.97□□□□□ -2.09
CPSF6-207ENST00000551516 EMCNQ9ULC0 261 aa1.97□□□□□ -2.09
CPSF6-207ENST00000551516 CLEC4AQ9UMR7 237 aa1.97□□□□□ -2.09
CPSF6-207ENST00000551516 GUCA1BQ9UMX6 200 aa1.97□□□□□ -2.09
CPSF6-207ENST00000551516 SNX12Q9UMY4 172 aa1.97□□□□□ -2.09
CPSF6-207ENST00000551516 ABCG2Q9UNQ0 655 aa1.97□□□□□ -2.09
CPSF6-207ENST00000551516 MRPS33Q9Y291 106 aaKnown RBP1.97□□□□□ -2.09
CPSF6-207ENST00000551516 NSG2Q9Y328 171 aa1.97□□□□□ -2.09
CPSF6-207ENST00000551516 TNFRSF18Q9Y5U5 241 aa1.97□□□□□ -2.09
CPSF6-207ENST00000551516 AP4B1Q9Y6B7 739 aa1.97□□□□□ -2.09
CPSF6-207ENST00000551516 EXPH5Q8NEV8 1989 aa1.97□□□□□ -2.09
CPSF6-207ENST00000551516 HEATR5AQ86XA9 2040 aa1.96□□□□□ -2.09
CPSF6-207ENST00000551516 RYR1P21817 5038 aa1.96□□□□□ -2.1
CPSF6-207ENST00000551516 DYNC2H1Q8NCM8 4307 aaKnown RBP1.96□□□□□ -2.1
CPSF6-207ENST00000551516 A0A1W2PQD3 144 aa1.96□□□□□ -2.1
CPSF6-207ENST00000551516 NCF1BA6NI72 391 aaPredicted RBP1.96□□□□□ -2.1
CPSF6-207ENST00000551516 OR5H1A6NKK0 313 aa1.96□□□□□ -2.1
CPSF6-207ENST00000551516 A8MT66 165 aa1.96□□□□□ -2.1
CPSF6-207ENST00000551516 ZNF724A8MTY0 619 aa1.96□□□□□ -2.1
CPSF6-207ENST00000551516 NCF1CA8MVU1 366 aaPredicted RBP1.96□□□□□ -2.1
CPSF6-207ENST00000551516 G3V2L1 256 aa1.96□□□□□ -2.1
CPSF6-207ENST00000551516 GOLGA6L19H0YKK7 550 aa1.96□□□□□ -2.1
CPSF6-207ENST00000551516 BLOC1S5-TXNDC5H3BN57 136 aa1.96□□□□□ -2.1
CPSF6-207ENST00000551516 CCL24O00175 119 aa1.96□□□□□ -2.1
CPSF6-207ENST00000551516 CXCL13O43927 109 aa1.96□□□□□ -2.1
CPSF6-207ENST00000551516 CYTIPO60759 359 aa1.96□□□□□ -2.1
CPSF6-207ENST00000551516 TRMUO75648 421 aaKnown RBP1.96□□□□□ -2.1
CPSF6-207ENST00000551516 SLC22A3O75751 556 aa1.96□□□□□ -2.1
CPSF6-207ENST00000551516 KRT33AO76009 404 aa1.96□□□□□ -2.1
CPSF6-207ENST00000551516 ZNF432O94892 652 aa1.96□□□□□ -2.1
CPSF6-207ENST00000551516 KCNK2O95069 426 aa1.96□□□□□ -2.1
CPSF6-207ENST00000551516 KLHL2O95198 593 aa1.96□□□□□ -2.1
CPSF6-207ENST00000551516 UTS2O95399 124 aa1.96□□□□□ -2.1
CPSF6-207ENST00000551516 OXSR1O95747 527 aaPredicted RBP1.96□□□□□ -2.1
CPSF6-207ENST00000551516 ANGPTL1O95841 491 aa1.96□□□□□ -2.1
CPSF6-207ENST00000551516 GAS8O95995 478 aa1.96□□□□□ -2.1
CPSF6-207ENST00000551516 NGFP01138 241 aa1.96□□□□□ -2.1
CPSF6-207ENST00000551516 PDYNP01213 254 aa1.96□□□□□ -2.1
CPSF6-207ENST00000551516 GUSBP08236 651 aa1.96□□□□□ -2.1
CPSF6-207ENST00000551516 SBK2P0C263 348 aa1.96□□□□□ -2.1
CPSF6-207ENST00000551516 NCF1P14598 390 aaPredicted RBP1.96□□□□□ -2.1
CPSF6-207ENST00000551516 CSNK2A2P19784 350 aaPredicted RBP1.96□□□□□ -2.1
CPSF6-207ENST00000551516 USF1P22415 310 aaPredicted RBP1.96□□□□□ -2.1
CPSF6-207ENST00000551516 CALCRP30988 508 aa1.96□□□□□ -2.1
CPSF6-207ENST00000551516 DUTP33316 252 aaKnown RBP1.96□□□□□ -2.1
CPSF6-207ENST00000551516 SSR2P43308 183 aa1.96□□□□□ -2.1
CPSF6-207ENST00000551516 EFNA4P52798 201 aa1.96□□□□□ -2.1
CPSF6-207ENST00000551516 DIO3P55073 304 aa1.96□□□□□ -2.1
CPSF6-207ENST00000551516 HILS1P60008 231 aa1.96□□□□□ -2.1
CPSF6-207ENST00000551516 RPP38P78345 283 aaKnown RBP1.96□□□□□ -2.1
CPSF6-207ENST00000551516 MRPS25P82663 173 aaKnown RBP1.96□□□□□ -2.1
CPSF6-207ENST00000551516 PAX2Q02962 417 aa1.96□□□□□ -2.1
CPSF6-207ENST00000551516 SLC3A1Q07837 685 aa1.96□□□□□ -2.1
CPSF6-207ENST00000551516 FUT5Q11128 374 aa1.96□□□□□ -2.1
CPSF6-207ENST00000551516 RCAN2Q14206 197 aa1.96□□□□□ -2.1
CPSF6-207ENST00000551516 SLC17A1Q14916 467 aa1.96□□□□□ -2.1
CPSF6-207ENST00000551516 MAPK14Q16539 360 aa1.96□□□□□ -2.1
CPSF6-207ENST00000551516 AARDQ4LEZ3 155 aa1.96□□□□□ -2.1
CPSF6-207ENST00000551516 ATP6AP1LQ52LC2 224 aa1.96□□□□□ -2.1
CPSF6-207ENST00000551516 CCDC92Q53HC0 331 aaPredicted RBP1.96□□□□□ -2.1
CPSF6-207ENST00000551516 FAM76BQ5HYJ3 339 aa1.96□□□□□ -2.1
CPSF6-207ENST00000551516 TIMM23BQ5SRD1 257 aa1.96□□□□□ -2.1
CPSF6-207ENST00000551516 SEL1L2Q5TEA6 688 aa1.96□□□□□ -2.1
CPSF6-207ENST00000551516 AGAP6Q5VW22 663 aa1.96□□□□□ -2.1
CPSF6-207ENST00000551516 PRAMEF8Q5VWM4 474 aa1.96□□□□□ -2.1
CPSF6-207ENST00000551516 OR2A2Q6IF42 318 aa1.96□□□□□ -2.1
CPSF6-207ENST00000551516 ETFRF1Q6IPR1 90 aa1.96□□□□□ -2.1
CPSF6-207ENST00000551516 PLBD1Q6P4A8 553 aa1.96□□□□□ -2.1
CPSF6-207ENST00000551516 ENPP6Q6UWR7 440 aa1.96□□□□□ -2.1
CPSF6-207ENST00000551516 TIFABQ6ZNK6 161 aa1.96□□□□□ -2.1
CPSF6-207ENST00000551516 USP43Q70EL4 1123 aa1.96□□□□□ -2.1
CPSF6-207ENST00000551516 FCRLAQ7L513 359 aa1.96□□□□□ -2.1
CPSF6-207ENST00000551516 SMIM29Q86T20 159 aa1.96□□□□□ -2.1
CPSF6-207ENST00000551516 IFNEQ86WN2 208 aa1.96□□□□□ -2.1
CPSF6-207ENST00000551516 GRAMD2AQ8IUY3 354 aa1.96□□□□□ -2.1
CPSF6-207ENST00000551516 RIMKLAQ8IXN7 391 aa1.96□□□□□ -2.1
CPSF6-207ENST00000551516 TEX9Q8N6V9 391 aa1.96□□□□□ -2.1
CPSF6-207ENST00000551516 LRTM2Q8N967 370 aa1.96□□□□□ -2.1
CPSF6-207ENST00000551516 SLC37A3Q8NCC5 494 aa1.96□□□□□ -2.1
CPSF6-207ENST00000551516 TRIM58Q8NG06 486 aa1.96□□□□□ -2.1
CPSF6-207ENST00000551516 OR4F6Q8NGB9 312 aa1.96□□□□□ -2.1
CPSF6-207ENST00000551516 OR8H1Q8NGG4 311 aa1.96□□□□□ -2.1
CPSF6-207ENST00000551516 OR9A2Q8NGT5 310 aa1.96□□□□□ -2.1
CPSF6-207ENST00000551516 OR2T11Q8NH01 316 aa1.96□□□□□ -2.1
CPSF6-207ENST00000551516 STAG3L4Q8TBR4 150 aa1.96□□□□□ -2.1
CPSF6-207ENST00000551516 RDH11Q8TC12 318 aa1.96□□□□□ -2.1
CPSF6-207ENST00000551516 C16orf78Q8WTQ4 265 aa1.96□□□□□ -2.1
CPSF6-207ENST00000551516 DCAKDQ8WVC6 231 aa1.96□□□□□ -2.1
CPSF6-207ENST00000551516 DYRK2Q92630 601 aa1.96□□□□□ -2.1
CPSF6-207ENST00000551516 BCL2L2Q92843 193 aaPredicted RBP1.96□□□□□ -2.1
CPSF6-207ENST00000551516 OSTF1Q92882 214 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms