RNA–Protein interactions for RNA: ENST00000550592.1

LIMA1-205, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-205ENST00000550592 ZNF630Q2M218 657 aaPredicted RBP3.32□□□□□ -1.88
LIMA1-205ENST00000550592 HES3Q5TGS1 186 aa3.32□□□□□ -1.88
LIMA1-205ENST00000550592 C1orf94Q6P1W5 598 aa3.32□□□□□ -1.88
LIMA1-205ENST00000550592 LRRC31Q6UY01 552 aa3.32□□□□□ -1.88
LIMA1-205ENST00000550592 SPNS3Q6ZMD2 512 aa3.32□□□□□ -1.88
LIMA1-205ENST00000550592 RNF165Q6ZSG1 346 aa3.32□□□□□ -1.88
LIMA1-205ENST00000550592 PLA2G4DQ86XP0 818 aa3.32□□□□□ -1.88
LIMA1-205ENST00000550592 SLC22A9Q8IVM8 553 aa3.32□□□□□ -1.88
LIMA1-205ENST00000550592 DEFB119Q8N690 84 aa3.32□□□□□ -1.88
LIMA1-205ENST00000550592 NECAB1Q8N987 351 aa3.32□□□□□ -1.88
LIMA1-205ENST00000550592 DCAF4L2Q8NA75 395 aa3.32□□□□□ -1.88
LIMA1-205ENST00000550592 FNDC5Q8NAU1 212 aa3.32□□□□□ -1.88
LIMA1-205ENST00000550592 OR9K2Q8NGE7 335 aa3.32□□□□□ -1.88
LIMA1-205ENST00000550592 OR1L6Q8NGR2 347 aa3.32□□□□□ -1.88
LIMA1-205ENST00000550592 PYROXD1Q8WU10 500 aa3.32□□□□□ -1.88
LIMA1-205ENST00000550592 ACOT11Q8WXI4 607 aaPredicted RBP3.32□□□□□ -1.88
LIMA1-205ENST00000550592 IFT74Q96LB3 600 aa3.32□□□□□ -1.88
LIMA1-205ENST00000550592 PANX2Q96RD6 677 aa3.32□□□□□ -1.88
LIMA1-205ENST00000550592 TMEM246Q9BRR3 403 aa3.32□□□□□ -1.88
LIMA1-205ENST00000550592 NAT9Q9BTE0 207 aa3.32□□□□□ -1.88
LIMA1-205ENST00000550592 RIOK2Q9BVS4 552 aaKnown RBP3.32□□□□□ -1.88
LIMA1-205ENST00000550592 LY9Q9HBG7 655 aa3.32□□□□□ -1.88
LIMA1-205ENST00000550592 NT5MQ9NPB1 228 aa3.32□□□□□ -1.88
LIMA1-205ENST00000550592 DAZ3Q9NR90 486 aaKnown RBP3.32□□□□□ -1.88
LIMA1-205ENST00000550592 KCNIP1Q9NZI2 227 aa3.32□□□□□ -1.88
LIMA1-205ENST00000550592 RABL2BQ9UNT1 228 aa3.32□□□□□ -1.88
LIMA1-205ENST00000550592 PRG3Q9Y2Y8 225 aaPredicted RBP3.32□□□□□ -1.88
LIMA1-205ENST00000550592 ZBED9Q6R2W3 1325 aa3.32□□□□□ -1.88
LIMA1-205ENST00000550592 CEP192Q8TEP8 1941 aa3.32□□□□□ -1.88
LIMA1-205ENST00000550592 HELZP42694 1942 aaKnown RBP3.31□□□□□ -1.88
LIMA1-205ENST00000550592 TNRC6BQ9UPQ9 1833 aaKnown RBP3.31□□□□□ -1.88
LIMA1-205ENST00000550592 PLIN4Q96Q06 1357 aa3.31□□□□□ -1.88
LIMA1-205ENST00000550592 GSTTP1A0A1W2PQM5 241 aa3.31□□□□□ -1.88
LIMA1-205ENST00000550592 FAM189A1O60320 539 aa3.31□□□□□ -1.88
LIMA1-205ENST00000550592 OR7A10O76100 309 aa3.31□□□□□ -1.88
LIMA1-205ENST00000550592 FGF1P05230 155 aa3.31□□□□□ -1.88
LIMA1-205ENST00000550592 CHTF8P0CG12 524 aa3.31□□□□□ -1.88
LIMA1-205ENST00000550592 CTRLP40313 264 aa3.31□□□□□ -1.88
LIMA1-205ENST00000550592 TPMTP51580 245 aa3.31□□□□□ -1.88
LIMA1-205ENST00000550592 ERVK-25P63136 954 aa3.31□□□□□ -1.88
LIMA1-205ENST00000550592 BST2Q10589 180 aaKnown RBP3.31□□□□□ -1.88
LIMA1-205ENST00000550592 SSX2Q16385 188 aa3.31□□□□□ -1.88
LIMA1-205ENST00000550592 TWF2Q6IBS0 349 aaKnown RBP3.31□□□□□ -1.88
LIMA1-205ENST00000550592 TAS2R42Q7RTR8 314 aa3.31□□□□□ -1.88
LIMA1-205ENST00000550592 NANOGNBQ7Z5D8 188 aa3.31□□□□□ -1.88
LIMA1-205ENST00000550592 PAQR7Q86WK9 346 aa3.31□□□□□ -1.88
LIMA1-205ENST00000550592 CDR2LQ86X02 465 aaPredicted RBP3.31□□□□□ -1.88
LIMA1-205ENST00000550592 ACOT4Q8N9L9 421 aa3.31□□□□□ -1.88
LIMA1-205ENST00000550592 LINC01555Q8NAE3 123 aa3.31□□□□□ -1.88
LIMA1-205ENST00000550592 SUMF2Q8NBJ7 301 aa3.31□□□□□ -1.88
LIMA1-205ENST00000550592 OR2L3Q8NG85 312 aa3.31□□□□□ -1.88
LIMA1-205ENST00000550592 OR9G1Q8NH87 305 aa3.31□□□□□ -1.88
LIMA1-205ENST00000550592 TCEAL4Q96EI5 215 aa3.31□□□□□ -1.88
LIMA1-205ENST00000550592 FCRL1Q96LA6 429 aa3.31□□□□□ -1.88
LIMA1-205ENST00000550592 OR11A1Q9GZK7 315 aa3.31□□□□□ -1.88
LIMA1-205ENST00000550592 GBA3Q9H227 469 aa3.31□□□□□ -1.88
LIMA1-205ENST00000550592 RANBP3Q9H6Z4 567 aaPredicted RBP3.31□□□□□ -1.88
LIMA1-205ENST00000550592 MMP26Q9NRE1 261 aa3.31□□□□□ -1.88
LIMA1-205ENST00000550592 ETNK2Q9NVF9 386 aa3.31□□□□□ -1.88
LIMA1-205ENST00000550592 QPCTLQ9NXS2 382 aa3.31□□□□□ -1.88
LIMA1-205ENST00000550592 ANAPC11Q9NYG5 84 aa3.31□□□□□ -1.88
LIMA1-205ENST00000550592 CLCF1Q9UBD9 225 aa3.31□□□□□ -1.88
LIMA1-205ENST00000550592 MTRF1LQ9UGC7 380 aaKnown RBP3.31□□□□□ -1.88
LIMA1-205ENST00000550592 SLC7A8Q9UHI5 535 aa3.31□□□□□ -1.88
LIMA1-205ENST00000550592 ADGRG4Q8IZF6 3080 aa3.31□□□□□ -1.88
LIMA1-205ENST00000550592 NIPBLQ6KC79 2804 aaeCLIP3.3□□□□□ -1.88
LIMA1-205ENST00000550592 JMJD1CQ15652 2540 aa3.3□□□□□ -1.88
LIMA1-205ENST00000550592 A0A0G2JLM5 398 aa3.3□□□□□ -1.88
LIMA1-205ENST00000550592 PANO1I0J062 215 aa3.3□□□□□ -1.88
LIMA1-205ENST00000550592 ZNF861PO60384 105 aa3.3□□□□□ -1.88
LIMA1-205ENST00000550592 LDOC1O95751 146 aaPredicted RBP3.3□□□□□ -1.88
LIMA1-205ENST00000550592 ICAM2P13598 275 aa3.3□□□□□ -1.88
LIMA1-205ENST00000550592 HSD17B2P37059 387 aa3.3□□□□□ -1.88
LIMA1-205ENST00000550592 YAP1P46937 504 aaKnown RBP3.3□□□□□ -1.88
LIMA1-205ENST00000550592 CLDN6P56747 220 aa3.3□□□□□ -1.88
LIMA1-205ENST00000550592 PSMD5Q16401 504 aa3.3□□□□□ -1.88
LIMA1-205ENST00000550592 KCTD21Q4G0X4 260 aa3.3□□□□□ -1.88
LIMA1-205ENST00000550592 PAGE3Q5JUK9 113 aa3.3□□□□□ -1.88
LIMA1-205ENST00000550592 GPR157Q5UAW9 335 aa3.3□□□□□ -1.88
LIMA1-205ENST00000550592 CTRB2Q6GPI1 263 aa3.3□□□□□ -1.88
LIMA1-205ENST00000550592 ZYG11AQ6WRX3 759 aa3.3□□□□□ -1.88
LIMA1-205ENST00000550592 ZNF620Q6ZNG0 422 aa3.3□□□□□ -1.88
LIMA1-205ENST00000550592 SLC25A48Q6ZT89 311 aaKnown RBP3.3□□□□□ -1.88
LIMA1-205ENST00000550592 ZNF546Q86UE3 836 aa3.3□□□□□ -1.88
LIMA1-205ENST00000550592 PSTKQ8IV42 348 aaKnown RBP3.3□□□□□ -1.88
LIMA1-205ENST00000550592 METTL13Q8N6R0 699 aa3.3□□□□□ -1.88
LIMA1-205ENST00000550592 SDR9C7Q8NEX9 313 aa3.3□□□□□ -1.88
LIMA1-205ENST00000550592 OR4F6Q8NGB9 312 aa3.3□□□□□ -1.88
LIMA1-205ENST00000550592 SLC2A14Q8TDB8 520 aa3.3□□□□□ -1.88
LIMA1-205ENST00000550592 ARPC1AQ92747 370 aa3.3□□□□□ -1.88
LIMA1-205ENST00000550592 MYDGFQ969H8 173 aa3.3□□□□□ -1.88
LIMA1-205ENST00000550592 PLEKHA8Q96JA3 519 aa3.3□□□□□ -1.88
LIMA1-205ENST00000550592 MS4A4EQ96PG1 132 aa3.3□□□□□ -1.88
LIMA1-205ENST00000550592 MFFQ9GZY8 342 aa3.3□□□□□ -1.88
LIMA1-205ENST00000550592 NXF3Q9H4D5 531 aaKnown RBP3.3□□□□□ -1.88
LIMA1-205ENST00000550592 NANOGQ9H9S0 305 aa3.3□□□□□ -1.88
LIMA1-205ENST00000550592 GLRX2Q9NS18 164 aa3.3□□□□□ -1.88
LIMA1-205ENST00000550592 RPS6KB2Q9UBS0 482 aa3.3□□□□□ -1.88
LIMA1-205ENST00000550592 IKZF2Q9UKS7 526 aa3.3□□□□□ -1.88
LIMA1-205ENST00000550592 MMP17Q9ULZ9 603 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms