RNA–Protein interactions for RNA: ENST00000548771.1

CCDC38-206, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 470 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-206ENST00000548771 RND2P52198 227 aa1.49□□□□□ -2.17
CCDC38-206ENST00000548771 CDKN2DP55273 166 aa1.49□□□□□ -2.17
CCDC38-206ENST00000548771 RCAN2Q14206 197 aa1.49□□□□□ -2.17
CCDC38-206ENST00000548771 QPRTQ15274 297 aa1.49□□□□□ -2.17
CCDC38-206ENST00000548771 PPP1R7Q15435 360 aa1.49□□□□□ -2.17
CCDC38-206ENST00000548771 TAF9Q16594 264 aa1.49□□□□□ -2.17
CCDC38-206ENST00000548771 TMEM107Q6UX40 140 aa1.49□□□□□ -2.17
CCDC38-206ENST00000548771 OR2A1Q8NGT9 310 aa1.49□□□□□ -2.17
CCDC38-206ENST00000548771 OR13G1Q8NGZ3 307 aa1.49□□□□□ -2.17
CCDC38-206ENST00000548771 GALNT14Q96FL9 552 aa1.49□□□□□ -2.17
CCDC38-206ENST00000548771 HSD17B10Q99714 261 aaKnown RBP1.49□□□□□ -2.17
CCDC38-206ENST00000548771 SLC29A1Q99808 456 aa1.49□□□□□ -2.17
CCDC38-206ENST00000548771 OR52D1Q9H346 318 aa1.49□□□□□ -2.17
CCDC38-206ENST00000548771 C1orf198Q9H425 327 aa1.49□□□□□ -2.17
CCDC38-206ENST00000548771 EDA2RQ9HAV5 297 aa1.49□□□□□ -2.17
CCDC38-206ENST00000548771 KCNE3Q9Y6H6 103 aa1.49□□□□□ -2.17
CCDC38-206ENST00000548771 TRAV19A0A0A6YYK7 116 aa1.48□□□□□ -2.17
CCDC38-206ENST00000548771 SMCO2A6NFE2 343 aa1.48□□□□□ -2.17
CCDC38-206ENST00000548771 AIM2O14862 343 aa1.48□□□□□ -2.17
CCDC38-206ENST00000548771 RAB29O14966 203 aa1.48□□□□□ -2.17
CCDC38-206ENST00000548771 CHST10O43529 356 aa1.48□□□□□ -2.17
CCDC38-206ENST00000548771 CHST1O43916 411 aa1.48□□□□□ -2.17
CCDC38-206ENST00000548771 CST1P01037 141 aa1.48□□□□□ -2.17
CCDC38-206ENST00000548771 HLA-DQB1P01920 261 aa1.48□□□□□ -2.17
CCDC38-206ENST00000548771 SERPINA5P05154 406 aa1.48□□□□□ -2.17
CCDC38-206ENST00000548771 EIF4EP06730 217 aaKnown RBP1.48□□□□□ -2.17
CCDC38-206ENST00000548771 ANXA5P08758 320 aa1.48□□□□□ -2.17
CCDC38-206ENST00000548771 ACSM4P0C7M7 580 aa1.48□□□□□ -2.17
CCDC38-206ENST00000548771 OR8U9P0C7N5 309 aa1.48□□□□□ -2.17
CCDC38-206ENST00000548771 ZNF688P0C7X2 276 aa1.48□□□□□ -2.17
CCDC38-206ENST00000548771 PABPC4LP0CB38 370 aaKnown RBP1.48□□□□□ -2.17
CCDC38-206ENST00000548771 ZNF43P17038 809 aa1.48□□□□□ -2.17
CCDC38-206ENST00000548771 GGT1P19440 569 aa1.48□□□□□ -2.17
CCDC38-206ENST00000548771 RAB3AP20336 220 aa1.48□□□□□ -2.17
CCDC38-206ENST00000548771 FOXN2P32314 431 aa1.48□□□□□ -2.17
CCDC38-206ENST00000548771 NAA10P41227 235 aaPredicted RBP1.48□□□□□ -2.17
CCDC38-206ENST00000548771 NSG1P42857 185 aa1.48□□□□□ -2.17
CCDC38-206ENST00000548771 TMED10P49755 219 aaKnown RBP1.48□□□□□ -2.17
CCDC38-206ENST00000548771 SLC39A6Q13433 755 aa1.48□□□□□ -2.17
CCDC38-206ENST00000548771 OR7A5Q15622 319 aa1.48□□□□□ -2.17
CCDC38-206ENST00000548771 SSX2Q16385 188 aa1.48□□□□□ -2.17
CCDC38-206ENST00000548771 UNQ9165/PRO28630Q6UXU0 137 aa1.48□□□□□ -2.17
CCDC38-206ENST00000548771 CDKL3Q8IVW4 592 aaPredicted RBP1.48□□□□□ -2.17
CCDC38-206ENST00000548771 TMEM256Q8N2U0 113 aa1.48□□□□□ -2.17
CCDC38-206ENST00000548771 OR9K2Q8NGE7 335 aa1.48□□□□□ -2.17
CCDC38-206ENST00000548771 OR13C2Q8NGS9 318 aa1.48□□□□□ -2.17
CCDC38-206ENST00000548771 KCNG3Q8TAE7 436 aa1.48□□□□□ -2.17
CCDC38-206ENST00000548771 CIRBP-AS1Q8TBR5 109 aa1.48□□□□□ -2.17
CCDC38-206ENST00000548771 SHC3Q92529 594 aa1.48□□□□□ -2.17
CCDC38-206ENST00000548771 KIFAP3Q92845 792 aa1.48□□□□□ -2.17
CCDC38-206ENST00000548771 FBXO32Q969P5 355 aa1.48□□□□□ -2.17
CCDC38-206ENST00000548771 NT5C3BQ969T7 300 aa1.48□□□□□ -2.17
CCDC38-206ENST00000548771 PTX4Q96A99 478 aa1.48□□□□□ -2.17
CCDC38-206ENST00000548771 SLC25A46Q96AG3 418 aa1.48□□□□□ -2.17
CCDC38-206ENST00000548771 ILKAPQ9H0C8 392 aaPredicted RBP1.48□□□□□ -2.17
CCDC38-206ENST00000548771 NT5C3AQ9H0P0 336 aa1.48□□□□□ -2.17
CCDC38-206ENST00000548771 SLC38A10Q9HBR0 1119 aa1.48□□□□□ -2.17
CCDC38-206ENST00000548771 COX16Q9P0S2 106 aa1.48□□□□□ -2.17
CCDC38-206ENST00000548771 UXTQ9UBK9 157 aaPredicted RBP1.48□□□□□ -2.17
CCDC38-206ENST00000548771 SIGLEC9Q9Y336 463 aa1.48□□□□□ -2.17
CCDC38-206ENST00000548771 CAMTA1Q9Y6Y1 1673 aa1.48□□□□□ -2.17
CCDC38-206ENST00000548771 TRAV6A0A075B6T7 132 aa1.47□□□□□ -2.17
CCDC38-206ENST00000548771 CENPVL3A0A0U1RRI6 287 aa1.47□□□□□ -2.17
CCDC38-206ENST00000548771 VGLL3A8MV65 326 aa1.47□□□□□ -2.17
CCDC38-206ENST00000548771 LGALS9O00182 355 aa1.47□□□□□ -2.17
CCDC38-206ENST00000548771 CDC40O60508 579 aaKnown RBP eCLIP1.47□□□□□ -2.17
CCDC38-206ENST00000548771 FKBP6O75344 327 aa1.47□□□□□ -2.17
CCDC38-206ENST00000548771 CBR3O75828 277 aa1.47□□□□□ -2.17
CCDC38-206ENST00000548771 SLC22A5O76082 557 aa1.47□□□□□ -2.17
CCDC38-206ENST00000548771 CD74P04233 296 aa1.47□□□□□ -2.17
CCDC38-206ENST00000548771 P0C880 135 aa1.47□□□□□ -2.17
CCDC38-206ENST00000548771 ZNF735P0CB33 412 aa1.47□□□□□ -2.17
CCDC38-206ENST00000548771 ZNF24P17028 368 aa1.47□□□□□ -2.17
CCDC38-206ENST00000548771 GPX4P36969 197 aaPredicted RBP1.47□□□□□ -2.17
CCDC38-206ENST00000548771 CCNG1P51959 295 aa1.47□□□□□ -2.17
CCDC38-206ENST00000548771 ACLYP53396 1101 aa1.47□□□□□ -2.17
CCDC38-206ENST00000548771 TAS2R31P59538 309 aa1.47□□□□□ -2.17
CCDC38-206ENST00000548771 PPP1CBP62140 327 aa1.47□□□□□ -2.17
CCDC38-206ENST00000548771 CRADDP78560 199 aa1.47□□□□□ -2.17
CCDC38-206ENST00000548771 CDK5Q00535 292 aa1.47□□□□□ -2.17
CCDC38-206ENST00000548771 ZNF616Q08AN1 781 aa1.47□□□□□ -2.17
CCDC38-206ENST00000548771 DDX39BQ13838 428 aaKnown RBP1.47□□□□□ -2.17
CCDC38-206ENST00000548771 MAJINQ3KP22 176 aa1.47□□□□□ -2.17
CCDC38-206ENST00000548771 MPV17L2Q567V2 206 aa1.47□□□□□ -2.17
CCDC38-206ENST00000548771 TCEAL5Q5H9L2 206 aa1.47□□□□□ -2.17
CCDC38-206ENST00000548771 SPIN3Q5JUX0 258 aa1.47□□□□□ -2.17
CCDC38-206ENST00000548771 PPM1LQ5SGD2 360 aa1.47□□□□□ -2.17
CCDC38-206ENST00000548771 AVPI1Q5T686 147 aa1.47□□□□□ -2.17
CCDC38-206ENST00000548771 SASS6Q6UVJ0 657 aa1.47□□□□□ -2.17
CCDC38-206ENST00000548771 MBOAT1Q6ZNC8 495 aa1.47□□□□□ -2.17
CCDC38-206ENST00000548771 SLC16A13Q7RTY0 426 aa1.47□□□□□ -2.17
CCDC38-206ENST00000548771 NANOGNBQ7Z5D8 188 aa1.47□□□□□ -2.17
CCDC38-206ENST00000548771 TMEM150AQ86TG1 271 aa1.47□□□□□ -2.17
CCDC38-206ENST00000548771 ARL6IP6Q8N6S5 226 aa1.47□□□□□ -2.17
CCDC38-206ENST00000548771 COX18Q8N8Q8 333 aa1.47□□□□□ -2.17
CCDC38-206ENST00000548771 FBXL13Q8NEE6 735 aa1.47□□□□□ -2.17
CCDC38-206ENST00000548771 OR6N1Q8NGY5 312 aa1.47□□□□□ -2.17
CCDC38-206ENST00000548771 TCEAL3Q969E4 200 aa1.47□□□□□ -2.17
CCDC38-206ENST00000548771 DCPSQ96C86 337 aaKnown RBP1.47□□□□□ -2.17
CCDC38-206ENST00000548771 DNAJC1Q96KC8 554 aaKnown RBP1.47□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms