RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 PSG7Q13046 419 aa7.95□□□□□ -1.14
YBX3-218ENST00000546298 KCNMB1Q16558 191 aa7.95□□□□□ -1.14
YBX3-218ENST00000546298 SPATS1Q496A3 300 aa7.95□□□□□ -1.14
YBX3-218ENST00000546298 SMARCD3Q6STE5 483 aa7.95□□□□□ -1.14
YBX3-218ENST00000546298 VASH1Q7L8A9 365 aaPredicted RBP7.95□□□□□ -1.14
YBX3-218ENST00000546298 JAZF1Q86VZ6 243 aa7.95□□□□□ -1.14
YBX3-218ENST00000546298 PGAM4Q8N0Y7 254 aa7.95□□□□□ -1.14
YBX3-218ENST00000546298 RNF148Q8N7C7 305 aa7.95□□□□□ -1.14
YBX3-218ENST00000546298 OR4M2Q8NGB6 313 aa7.95□□□□□ -1.14
YBX3-218ENST00000546298 OR1F12Q8NHA8 337 aa7.95□□□□□ -1.14
YBX3-218ENST00000546298 GTF3AQ92664 365 aaKnown RBP7.95□□□□□ -1.14
YBX3-218ENST00000546298 RASD2Q96D21 266 aa7.95□□□□□ -1.14
YBX3-218ENST00000546298 HAVCR1Q96D42 359 aa7.95□□□□□ -1.14
YBX3-218ENST00000546298 CMBLQ96DG6 245 aa7.95□□□□□ -1.14
YBX3-218ENST00000546298 DHRS1Q96LJ7 313 aa7.95□□□□□ -1.14
YBX3-218ENST00000546298 GAL3ST1Q99999 423 aa7.95□□□□□ -1.14
YBX3-218ENST00000546298 NUAK2Q9H093 628 aa7.95□□□□□ -1.14
YBX3-218ENST00000546298 MSL2Q9HCI7 577 aa7.95□□□□□ -1.14
YBX3-218ENST00000546298 ASH2LQ9UBL3 628 aa7.95□□□□□ -1.14
YBX3-218ENST00000546298 PURGQ9UJV8 347 aaKnown RBP7.95□□□□□ -1.14
YBX3-218ENST00000546298 TMCC3Q9ULS5 477 aa7.95□□□□□ -1.14
YBX3-218ENST00000546298 COA3Q9Y2R0 106 aaPredicted RBP7.95□□□□□ -1.14
YBX3-218ENST00000546298 COL6A5A8TX70 2615 aa7.95□□□□□ -1.14
YBX3-218ENST00000546298 ZANQ9Y493 2812 aa7.94□□□□□ -1.14
YBX3-218ENST00000546298 ISPDA4D126 451 aa7.94□□□□□ -1.14
YBX3-218ENST00000546298 SOCS2O14508 198 aa7.94□□□□□ -1.14
YBX3-218ENST00000546298 ARPC3O15145 178 aa7.94□□□□□ -1.14
YBX3-218ENST00000546298 PLPP2O43688 288 aa7.94□□□□□ -1.14
YBX3-218ENST00000546298 IDH3BO43837 385 aa7.94□□□□□ -1.14
YBX3-218ENST00000546298 OR10H3O60404 316 aa7.94□□□□□ -1.14
YBX3-218ENST00000546298 DEAF1O75398 565 aaPredicted RBP7.94□□□□□ -1.14
YBX3-218ENST00000546298 UBOX5O94941 541 aa7.94□□□□□ -1.14
YBX3-218ENST00000546298 DIRAS1O95057 198 aa7.94□□□□□ -1.14
YBX3-218ENST00000546298 RENP00797 406 aa7.94□□□□□ -1.14
YBX3-218ENST00000546298 IGHV2-5P01817 119 aa7.94□□□□□ -1.14
YBX3-218ENST00000546298 FABP3P05413 133 aa7.94□□□□□ -1.14
YBX3-218ENST00000546298 RAC2P15153 192 aa7.94□□□□□ -1.14
YBX3-218ENST00000546298 KITLGP21583 273 aa7.94□□□□□ -1.14
YBX3-218ENST00000546298 FPR3P25089 353 aa7.94□□□□□ -1.14
YBX3-218ENST00000546298 NOS3P29474 1203 aa7.94□□□□□ -1.14
YBX3-218ENST00000546298 CDKN2AP42771 156 aaKnown RBP7.94□□□□□ -1.14
YBX3-218ENST00000546298 MNAT1P51948 309 aa7.94□□□□□ -1.14
YBX3-218ENST00000546298 SPIBQ01892 262 aa7.94□□□□□ -1.14
YBX3-218ENST00000546298 CDK5R2Q13319 367 aa7.94□□□□□ -1.14
YBX3-218ENST00000546298 SEC23BQ15437 767 aa7.94□□□□□ -1.14
YBX3-218ENST00000546298 RFX4Q33E94 735 aa7.94□□□□□ -1.14
YBX3-218ENST00000546298 SLC36A3Q495N2 470 aa7.94□□□□□ -1.14
YBX3-218ENST00000546298 SLC27A4Q6P1M0 643 aa7.94□□□□□ -1.14
YBX3-218ENST00000546298 C1orf94Q6P1W5 598 aa7.94□□□□□ -1.14
YBX3-218ENST00000546298 C16orf89Q6UX73 402 aa7.94□□□□□ -1.14
YBX3-218ENST00000546298 THSD4Q6ZMP0 1018 aa7.94□□□□□ -1.14
YBX3-218ENST00000546298 GJC3Q8NFK1 279 aa7.94□□□□□ -1.14
YBX3-218ENST00000546298 FANK1Q8TC84 345 aa7.94□□□□□ -1.14
YBX3-218ENST00000546298 ST7LQ8TDW4 575 aa7.94□□□□□ -1.14
YBX3-218ENST00000546298 ZNF418Q8TF45 676 aaPredicted RBP7.94□□□□□ -1.14
YBX3-218ENST00000546298 ZFAND2BQ8WV99 257 aa7.94□□□□□ -1.14
YBX3-218ENST00000546298 SAMD8Q96LT4 415 aa7.94□□□□□ -1.14
YBX3-218ENST00000546298 ERMAPQ96PL5 475 aaPredicted RBP7.94□□□□□ -1.14
YBX3-218ENST00000546298 CDRT15Q96T59 188 aa7.94□□□□□ -1.14
YBX3-218ENST00000546298 FUZQ9BT04 418 aa7.94□□□□□ -1.14
YBX3-218ENST00000546298 IFT27Q9BW83 186 aa7.94□□□□□ -1.14
YBX3-218ENST00000546298 HDHD2Q9H0R4 259 aa7.94□□□□□ -1.14
YBX3-218ENST00000546298 TMEM106BQ9NUM4 274 aa7.94□□□□□ -1.14
YBX3-218ENST00000546298 IL20RAQ9UHF4 553 aa7.94□□□□□ -1.14
YBX3-218ENST00000546298 TAGLN3Q9UI15 199 aa7.94□□□□□ -1.14
YBX3-218ENST00000546298 PCDHB10Q9UN67 800 aa7.94□□□□□ -1.14
YBX3-218ENST00000546298 ARL2BPQ9Y2Y0 163 aa7.94□□□□□ -1.14
YBX3-218ENST00000546298 STARD10Q9Y365 291 aa7.94□□□□□ -1.14
YBX3-218ENST00000546298 NPTNQ9Y639 398 aa7.94□□□□□ -1.14
YBX3-218ENST00000546298 V9GYQ6 96 aa7.94□□□□□ -1.14
YBX3-218ENST00000546298 MALRD1Q5VYJ5 2156 aa7.93□□□□□ -1.14
YBX3-218ENST00000546298 IFNL4K9M1U5 179 aa7.93□□□□□ -1.14
YBX3-218ENST00000546298 RER1O15258 196 aa7.93□□□□□ -1.14
YBX3-218ENST00000546298 FOXH1O75593 365 aa7.93□□□□□ -1.14
YBX3-218ENST00000546298 DCTN3O75935 186 aa7.93□□□□□ -1.14
YBX3-218ENST00000546298 KRT36O76013 467 aa7.93□□□□□ -1.14
YBX3-218ENST00000546298 PPP1R3DO95685 299 aa7.93□□□□□ -1.14
YBX3-218ENST00000546298 SBK2P0C263 348 aa7.93□□□□□ -1.14
YBX3-218ENST00000546298 FXYD6P3P58550 94 aa7.93□□□□□ -1.14
YBX3-218ENST00000546298 MXRA7P84157 204 aa7.93□□□□□ -1.14
YBX3-218ENST00000546298 ECH1Q13011 328 aa7.93□□□□□ -1.14
YBX3-218ENST00000546298 CCDC92Q53HC0 331 aaPredicted RBP7.93□□□□□ -1.14
YBX3-218ENST00000546298 DCAF12L2Q5VW00 463 aa7.93□□□□□ -1.14
YBX3-218ENST00000546298 RPL13AP3Q6NVV1 102 aa7.93□□□□□ -1.14
YBX3-218ENST00000546298 PTCHD4Q6ZW05 846 aa7.93□□□□□ -1.14
YBX3-218ENST00000546298 LINC00471Q8N535 108 aa7.93□□□□□ -1.14
YBX3-218ENST00000546298 SPICQ8N5J4 248 aa7.93□□□□□ -1.14
YBX3-218ENST00000546298 FAM86B1Q8N7N1 296 aa7.93□□□□□ -1.14
YBX3-218ENST00000546298 OR2Z1Q8NG97 314 aa7.93□□□□□ -1.14
YBX3-218ENST00000546298 OR2AJ1Q8NGZ0 328 aa7.93□□□□□ -1.14
YBX3-218ENST00000546298 OR4K13Q8NH42 304 aa7.93□□□□□ -1.14
YBX3-218ENST00000546298 NANPQ8TBE9 248 aa7.93□□□□□ -1.14
YBX3-218ENST00000546298 GNPDA2Q8TDQ7 276 aa7.93□□□□□ -1.14
YBX3-218ENST00000546298 APOBEC3DQ96AK3 386 aaPredicted RBP7.93□□□□□ -1.14
YBX3-218ENST00000546298 ZNF582Q96NG8 517 aaPredicted RBP7.93□□□□□ -1.14
YBX3-218ENST00000546298 JMJD8Q96S16 334 aa7.93□□□□□ -1.14
YBX3-218ENST00000546298 COQ7Q99807 217 aa7.93□□□□□ -1.14
YBX3-218ENST00000546298 CDADC1Q9BWV3 514 aa7.93□□□□□ -1.14
YBX3-218ENST00000546298 OR52D1Q9H346 318 aa7.93□□□□□ -1.14
YBX3-218ENST00000546298 SRA1Q9HD15 236 aaKnown RBP7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms