RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 PLK3Q9H4B4 646 aa14.51□□□□□ -0.09
LTBR-215ENST00000546296 H2AFY2Q9P0M6 372 aaPredicted RBP14.51□□□□□ -0.09
LTBR-215ENST00000546296 GRIP1Q9Y3R0 1128 aa14.51□□□□□ -0.09
LTBR-215ENST00000546296 PMF1-BGLAPU3KQ54 211 aa14.51□□□□□ -0.09
LTBR-215ENST00000546296 HEATR1Q9H583 2144 aaKnown RBP14.51□□□□□ -0.09
LTBR-215ENST00000546296 CSMD1Q96PZ7 3565 aa14.5□□□□□ -0.09
LTBR-215ENST00000546296 CSMD2Q7Z408 3487 aa14.5□□□□□ -0.09
LTBR-215ENST00000546296 OR6C6A6NF89 314 aa14.5□□□□□ -0.09
LTBR-215ENST00000546296 B9A039 149 aa14.5□□□□□ -0.09
LTBR-215ENST00000546296 SYNGR3O43761 229 aa14.5□□□□□ -0.09
LTBR-215ENST00000546296 PRKYO43930 277 aa14.5□□□□□ -0.09
LTBR-215ENST00000546296 ABHD16AO95870 558 aa14.5□□□□□ -0.09
LTBR-215ENST00000546296 ANPEPP15144 967 aa14.5□□□□□ -0.09
LTBR-215ENST00000546296 RPS27P42677 84 aaKnown RBP14.5□□□□□ -0.09
LTBR-215ENST00000546296 SELENOVP59797 346 aa14.5□□□□□ -0.09
LTBR-215ENST00000546296 HIST1H3AP68431 136 aa14.5□□□□□ -0.09
LTBR-215ENST00000546296 HIST2H3PS2Q5TEC6 136 aa14.5□□□□□ -0.09
LTBR-215ENST00000546296 LINC01590Q5TEZ4 76 aa14.5□□□□□ -0.09
LTBR-215ENST00000546296 RGS7BPQ6MZT1 257 aaPredicted RBP14.5□□□□□ -0.09
LTBR-215ENST00000546296 CFAP77Q6ZQR2 320 aa14.5□□□□□ -0.09
LTBR-215ENST00000546296 HIST2H3AQ71DI3 136 aa14.5□□□□□ -0.09
LTBR-215ENST00000546296 ERI1Q8IV48 349 aaKnown RBP14.5□□□□□ -0.09
LTBR-215ENST00000546296 BBS1Q8NFJ9 593 aa14.5□□□□□ -0.09
LTBR-215ENST00000546296 OR1J1Q8NGS3 322 aa14.5□□□□□ -0.09
LTBR-215ENST00000546296 SLC7A6Q92536 515 aa14.5□□□□□ -0.09
LTBR-215ENST00000546296 ZMYND19Q96E35 227 aaPredicted RBP14.5□□□□□ -0.09
LTBR-215ENST00000546296 C4orf45Q96LM5 186 aa14.5□□□□□ -0.09
LTBR-215ENST00000546296 IL4I1Q96RQ9 567 aa14.5□□□□□ -0.09
LTBR-215ENST00000546296 COQ7Q99807 217 aa14.5□□□□□ -0.09
LTBR-215ENST00000546296 CACNG6Q9BXT2 260 aa14.5□□□□□ -0.09
LTBR-215ENST00000546296 HDHD2Q9H0R4 259 aa14.5□□□□□ -0.09
LTBR-215ENST00000546296 ELOVL3Q9HB03 270 aa14.5□□□□□ -0.09
LTBR-215ENST00000546296 DUSP13Q9UII6 198 aa14.5□□□□□ -0.09
LTBR-215ENST00000546296 FZR1Q9UM11 496 aa14.5□□□□□ -0.09
LTBR-215ENST00000546296 COMMD3-BMI1R4GMX3 469 aa14.5□□□□□ -0.09
LTBR-215ENST00000546296 M0R129 80 aa14.49□□□□□ -0.09
LTBR-215ENST00000546296 OVOL3O00110 214 aa14.49□□□□□ -0.09
LTBR-215ENST00000546296 PRODHO43272 600 aa14.49□□□□□ -0.09
LTBR-215ENST00000546296 WNT5AP41221 380 aa14.49□□□□□ -0.09
LTBR-215ENST00000546296 PTH2RP49190 550 aa14.49□□□□□ -0.09
LTBR-215ENST00000546296 ATP5J2P56134 94 aa14.49□□□□□ -0.09
LTBR-215ENST00000546296 ECH1Q13011 328 aa14.49□□□□□ -0.09
LTBR-215ENST00000546296 APOFQ13790 326 aa14.49□□□□□ -0.09
LTBR-215ENST00000546296 TRIP10Q15642 601 aa14.49□□□□□ -0.09
LTBR-215ENST00000546296 EFNB3Q15768 340 aa14.49□□□□□ -0.09
LTBR-215ENST00000546296 MST1LQ2TV78 715 aa14.49□□□□□ -0.09
LTBR-215ENST00000546296 TEX30Q5JUR7 227 aa14.49□□□□□ -0.09
LTBR-215ENST00000546296 SLC35D3Q5M8T2 416 aa14.49□□□□□ -0.09
LTBR-215ENST00000546296 C11orf71Q6IPW1 123 aa14.49□□□□□ -0.09
LTBR-215ENST00000546296 DCXRQ7Z4W1 244 aa14.49□□□□□ -0.09
LTBR-215ENST00000546296 OR6N2Q8NGY6 317 aa14.49□□□□□ -0.09
LTBR-215ENST00000546296 ABHD4Q8TB40 342 aa14.49□□□□□ -0.09
LTBR-215ENST00000546296 TMEM163Q8TC26 289 aa14.49□□□□□ -0.09
LTBR-215ENST00000546296 MRPL24Q96A35 216 aaKnown RBP14.49□□□□□ -0.09
LTBR-215ENST00000546296 SLC29A1Q99808 456 aa14.49□□□□□ -0.09
LTBR-215ENST00000546296 GSX2Q9BZM3 304 aa14.49□□□□□ -0.09
LTBR-215ENST00000546296 ZNF701Q9NV72 531 aaPredicted RBP14.49□□□□□ -0.09
LTBR-215ENST00000546296 CCDC168Q8NDH2 2452 aa14.49□□□□□ -0.09
LTBR-215ENST00000546296 DBHP09172 617 aa14.48□□□□□ -0.09
LTBR-215ENST00000546296 CDC42P60953 191 aa14.48□□□□□ -0.09
LTBR-215ENST00000546296 ELF3P78545 371 aaPredicted RBP14.48□□□□□ -0.09
LTBR-215ENST00000546296 TAF13Q15543 124 aa14.48□□□□□ -0.09
LTBR-215ENST00000546296 SWI5Q1ZZU3 235 aa14.48□□□□□ -0.09
LTBR-215ENST00000546296 SPATA46Q5T0L3 261 aa14.48□□□□□ -0.09
LTBR-215ENST00000546296 ZNF101Q8IZC7 436 aa14.48□□□□□ -0.09
LTBR-215ENST00000546296 LRRC75A-AS1Q8N1F1 130 aa14.48□□□□□ -0.09
LTBR-215ENST00000546296 SYNPRQ8TBG9 265 aa14.48□□□□□ -0.09
LTBR-215ENST00000546296 DCLRE1CQ96SD1 692 aaKnown RBP14.48□□□□□ -0.09
LTBR-215ENST00000546296 ATF6BQ99941 703 aa14.48□□□□□ -0.09
LTBR-215ENST00000546296 SYT3Q9BQG1 590 aa14.48□□□□□ -0.09
LTBR-215ENST00000546296 MRPL37Q9BZE1 423 aaKnown RBP14.48□□□□□ -0.09
LTBR-215ENST00000546296 TOR3AQ9H497 397 aa14.48□□□□□ -0.09
LTBR-215ENST00000546296 CENPMQ9NSP4 180 aa14.48□□□□□ -0.09
LTBR-215ENST00000546296 IMPAD1Q9NX62 359 aa14.48□□□□□ -0.09
LTBR-215ENST00000546296 ATPIF1Q9UII2 106 aa14.48□□□□□ -0.09
LTBR-215ENST00000546296 MAP1AP78559 2803 aaPredicted RBP14.47□□□□□ -0.09
LTBR-215ENST00000546296 RAI1Q7Z5J4 1906 aaPredicted RBP14.47□□□□□ -0.09
LTBR-215ENST00000546296 F5H5K5 113 aa14.47□□□□□ -0.09
LTBR-215ENST00000546296 NGFP01138 241 aa14.47□□□□□ -0.09
LTBR-215ENST00000546296 PAX1P15863 534 aa14.47□□□□□ -0.09
LTBR-215ENST00000546296 GCH1P30793 250 aa14.47□□□□□ -0.09
LTBR-215ENST00000546296 ERVS71-1P61550 626 aa14.47□□□□□ -0.09
LTBR-215ENST00000546296 PPP1CBP62140 327 aa14.47□□□□□ -0.09
LTBR-215ENST00000546296 EIF2B1Q14232 305 aaKnown RBP14.47□□□□□ -0.09
LTBR-215ENST00000546296 PCK2Q16822 640 aa14.47□□□□□ -0.09
LTBR-215ENST00000546296 LRRC36Q1X8D7 754 aa14.47□□□□□ -0.09
LTBR-215ENST00000546296 ZNF718Q3SXZ3 478 aa14.47□□□□□ -0.09
LTBR-215ENST00000546296 LCN1P1Q5VSP4 162 aa14.47□□□□□ -0.09
LTBR-215ENST00000546296 SHFQ7M4L6 423 aa14.47□□□□□ -0.09
LTBR-215ENST00000546296 DPY19L4Q7Z388 723 aa14.47□□□□□ -0.09
LTBR-215ENST00000546296 BCDIN3DQ7Z5W3 292 aaKnown RBP14.47□□□□□ -0.09
LTBR-215ENST00000546296 LRP11Q86VZ4 500 aa14.47□□□□□ -0.09
LTBR-215ENST00000546296 C1orf174Q8IYL3 243 aa14.47□□□□□ -0.09
LTBR-215ENST00000546296 GALNT4Q8N4A0 578 aa14.47□□□□□ -0.09
LTBR-215ENST00000546296 SPTSSAQ969W0 71 aa14.47□□□□□ -0.09
LTBR-215ENST00000546296 MAP6Q96JE9 813 aa14.47□□□□□ -0.09
LTBR-215ENST00000546296 TEAD3Q99594 435 aa14.47□□□□□ -0.09
LTBR-215ENST00000546296 VRK1Q99986 396 aaPredicted RBP14.47□□□□□ -0.09
LTBR-215ENST00000546296 MARCH7Q9H992 704 aa14.47□□□□□ -0.09
LTBR-215ENST00000546296 DYNLRB1Q9NP97 96 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms