RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 J3QW42 95 aa10.16□□□□□ -0.78
YBX3-217ENST00000546164 RER1O15258 196 aa10.16□□□□□ -0.78
YBX3-217ENST00000546164 DEAF1O75398 565 aaPredicted RBP10.16□□□□□ -0.78
YBX3-217ENST00000546164 E2F6O75461 281 aa10.16□□□□□ -0.78
YBX3-217ENST00000546164 SOX14O95416 240 aa10.16□□□□□ -0.78
YBX3-217ENST00000546164 GPANK1O95872 356 aa10.16□□□□□ -0.78
YBX3-217ENST00000546164 CLPTM1O96005 669 aa10.16□□□□□ -0.78
YBX3-217ENST00000546164 DAOP14920 347 aa10.16□□□□□ -0.78
YBX3-217ENST00000546164 GIFP27352 417 aa10.16□□□□□ -0.78
YBX3-217ENST00000546164 GGT2P36268 569 aa10.16□□□□□ -0.78
YBX3-217ENST00000546164 ALDH3B1P43353 468 aa10.16□□□□□ -0.78
YBX3-217ENST00000546164 HTR5AP47898 357 aa10.16□□□□□ -0.78
YBX3-217ENST00000546164 SLC25A1P53007 311 aa10.16□□□□□ -0.78
YBX3-217ENST00000546164 PPP1CBP62140 327 aa10.16□□□□□ -0.78
YBX3-217ENST00000546164 MRPS11P82912 194 aaKnown RBP10.16□□□□□ -0.78
YBX3-217ENST00000546164 TEKQ02763 1124 aa10.16□□□□□ -0.78
YBX3-217ENST00000546164 MAD2L1BPQ15013 274 aaPredicted RBP10.16□□□□□ -0.78
YBX3-217ENST00000546164 MEP1BQ16820 701 aa10.16□□□□□ -0.78
YBX3-217ENST00000546164 ZNF718Q3SXZ3 478 aa10.16□□□□□ -0.78
YBX3-217ENST00000546164 OTPQ5XKR4 325 aa10.16□□□□□ -0.78
YBX3-217ENST00000546164 ZNF786Q8N393 782 aa10.16□□□□□ -0.78
YBX3-217ENST00000546164 SLC37A3Q8NCC5 494 aa10.16□□□□□ -0.78
YBX3-217ENST00000546164 ZNF540Q8NDQ6 660 aa10.16□□□□□ -0.78
YBX3-217ENST00000546164 OR2T4Q8NH00 348 aa10.16□□□□□ -0.78
YBX3-217ENST00000546164 OR1F12Q8NHA8 337 aa10.16□□□□□ -0.78
YBX3-217ENST00000546164 ABHD4Q8TB40 342 aa10.16□□□□□ -0.78
YBX3-217ENST00000546164 SLC25A40Q8TBP6 338 aa10.16□□□□□ -0.78
YBX3-217ENST00000546164 IPCEF1Q8WWN9 437 aaPredicted RBP10.16□□□□□ -0.78
YBX3-217ENST00000546164 UTP4Q969X6 686 aaKnown RBP10.16□□□□□ -0.78
YBX3-217ENST00000546164 NRBF2Q96F24 287 aa10.16□□□□□ -0.78
YBX3-217ENST00000546164 DUS3LQ96G46 650 aaKnown RBP10.16□□□□□ -0.78
YBX3-217ENST00000546164 DCLRE1CQ96SD1 692 aaKnown RBP10.16□□□□□ -0.78
YBX3-217ENST00000546164 COQ7Q99807 217 aa10.16□□□□□ -0.78
YBX3-217ENST00000546164 NMNAT2Q9BZQ4 307 aa10.16□□□□□ -0.78
YBX3-217ENST00000546164 HDHD2Q9H0R4 259 aa10.16□□□□□ -0.78
YBX3-217ENST00000546164 FN3KQ9H479 309 aa10.16□□□□□ -0.78
YBX3-217ENST00000546164 NTN4Q9HB63 628 aa10.16□□□□□ -0.78
YBX3-217ENST00000546164 ARMC1Q9NVT9 282 aa10.16□□□□□ -0.78
YBX3-217ENST00000546164 NKIRAS2Q9NYR9 191 aa10.16□□□□□ -0.78
YBX3-217ENST00000546164 PDP1Q9P0J1 537 aaPredicted RBP10.16□□□□□ -0.78
YBX3-217ENST00000546164 TAAR3PQ9P1P4 343 aa10.16□□□□□ -0.78
YBX3-217ENST00000546164 CYB5R1Q9UHQ9 305 aa10.16□□□□□ -0.78
YBX3-217ENST00000546164 POLR1DQ9Y2S0 133 aa10.16□□□□□ -0.78
YBX3-217ENST00000546164 JMJD1CQ15652 2540 aa10.15□□□□□ -0.78
YBX3-217ENST00000546164 C17orf100A8MU93 164 aa10.15□□□□□ -0.78
YBX3-217ENST00000546164 ABHD16AO95870 558 aa10.15□□□□□ -0.78
YBX3-217ENST00000546164 NGFP01138 241 aa10.15□□□□□ -0.78
YBX3-217ENST00000546164 IFNGP01579 166 aa10.15□□□□□ -0.78
YBX3-217ENST00000546164 ANXA8P13928 327 aa10.15□□□□□ -0.78
YBX3-217ENST00000546164 GRK5P34947 590 aa10.15□□□□□ -0.78
YBX3-217ENST00000546164 NR4A2P43354 598 aa10.15□□□□□ -0.78
YBX3-217ENST00000546164 CENPAP49450 140 aa10.15□□□□□ -0.78
YBX3-217ENST00000546164 ARHGDIAP52565 204 aa10.15□□□□□ -0.78
YBX3-217ENST00000546164 CRMP1Q14194 572 aa10.15□□□□□ -0.78
YBX3-217ENST00000546164 NKPD1Q17RQ9 610 aa10.15□□□□□ -0.78
YBX3-217ENST00000546164 PCGF3Q3KNV8 242 aa10.15□□□□□ -0.78
YBX3-217ENST00000546164 KRTAP27-1Q3LI81 207 aa10.15□□□□□ -0.78
YBX3-217ENST00000546164 ELFN2Q5R3F8 820 aa10.15□□□□□ -0.78
YBX3-217ENST00000546164 SLC18B1Q6NT16 456 aa10.15□□□□□ -0.78
YBX3-217ENST00000546164 SHQ1Q6PI26 577 aaKnown RBP10.15□□□□□ -0.78
YBX3-217ENST00000546164 ASRGL1Q7L266 308 aa10.15□□□□□ -0.78
YBX3-217ENST00000546164 CYB561A3Q8NBI2 242 aa10.15□□□□□ -0.78
YBX3-217ENST00000546164 MAPK1IP1LQ8NDC0 245 aa10.15□□□□□ -0.78
YBX3-217ENST00000546164 ICA1LQ8NDH6 482 aa10.15□□□□□ -0.78
YBX3-217ENST00000546164 TEX47Q8TBZ9 253 aa10.15□□□□□ -0.78
YBX3-217ENST00000546164 KLF14Q8TD94 323 aaPredicted RBP10.15□□□□□ -0.78
YBX3-217ENST00000546164 UBASH3BQ8TF42 649 aa10.15□□□□□ -0.78
YBX3-217ENST00000546164 SNX33Q8WV41 574 aa10.15□□□□□ -0.78
YBX3-217ENST00000546164 DNAJC9Q8WXX5 260 aa10.15□□□□□ -0.78
YBX3-217ENST00000546164 COG8Q96MW5 612 aa10.15□□□□□ -0.78
YBX3-217ENST00000546164 PIMREGQ9BSJ6 248 aa10.15□□□□□ -0.78
YBX3-217ENST00000546164 OR2J1Q9GZK6 312 aa10.15□□□□□ -0.78
YBX3-217ENST00000546164 TPK1Q9H3S4 243 aa10.15□□□□□ -0.78
YBX3-217ENST00000546164 HINT3Q9NQE9 182 aaKnown RBP10.15□□□□□ -0.78
YBX3-217ENST00000546164 CMC2Q9NRP2 79 aa10.15□□□□□ -0.78
YBX3-217ENST00000546164 MRPL22Q9NWU5 206 aaKnown RBP10.15□□□□□ -0.78
YBX3-217ENST00000546164 CGGBP1Q9UFW8 167 aaPredicted RBP10.15□□□□□ -0.78
YBX3-217ENST00000546164 CR1P17927 2039 aa10.14□□□□□ -0.79
YBX3-217ENST00000546164 RIIAD1A6NNX1 92 aa10.14□□□□□ -0.79
YBX3-217ENST00000546164 MT-ND5P03915 603 aa10.14□□□□□ -0.79
YBX3-217ENST00000546164 ADH4P08319 380 aa10.14□□□□□ -0.79
YBX3-217ENST00000546164 NAT2P11245 290 aa10.14□□□□□ -0.79
YBX3-217ENST00000546164 OSMP13725 252 aa10.14□□□□□ -0.79
YBX3-217ENST00000546164 ZNF3P17036 446 aa10.14□□□□□ -0.79
YBX3-217ENST00000546164 USF1P22415 310 aaPredicted RBP10.14□□□□□ -0.79
YBX3-217ENST00000546164 GCH1P30793 250 aa10.14□□□□□ -0.79
YBX3-217ENST00000546164 MPV17P39210 176 aa10.14□□□□□ -0.79
YBX3-217ENST00000546164 RGS6P49758 472 aa10.14□□□□□ -0.79
YBX3-217ENST00000546164 ERFP50548 548 aa10.14□□□□□ -0.79
YBX3-217ENST00000546164 MMP15P51511 669 aa10.14□□□□□ -0.79
YBX3-217ENST00000546164 BLVRAP53004 296 aa10.14□□□□□ -0.79
YBX3-217ENST00000546164 DBPQ10586 325 aaPredicted RBP10.14□□□□□ -0.79
YBX3-217ENST00000546164 ECH1Q13011 328 aa10.14□□□□□ -0.79
YBX3-217ENST00000546164 RIN1Q13671 783 aa10.14□□□□□ -0.79
YBX3-217ENST00000546164 PCK2Q16822 640 aa10.14□□□□□ -0.79
YBX3-217ENST00000546164 TMEM249Q2WGJ8 235 aa10.14□□□□□ -0.79
YBX3-217ENST00000546164 TMEM255AQ5JRV8 349 aa10.14□□□□□ -0.79
YBX3-217ENST00000546164 SPATA46Q5T0L3 261 aa10.14□□□□□ -0.79
YBX3-217ENST00000546164 C1orf146Q5VVC0 180 aa10.14□□□□□ -0.79
YBX3-217ENST00000546164 SLC27A4Q6P1M0 643 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms