RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 OR9A4Q8NGU2 314 aa12.76□□□□□ -0.37
SRP54-202ENST00000546080 PHOSPHO1Q8TCT1 267 aa12.76□□□□□ -0.37
SRP54-202ENST00000546080 AQP3Q92482 292 aa12.76□□□□□ -0.37
SRP54-202ENST00000546080 NMES1Q9C002 83 aa12.76□□□□□ -0.37
SRP54-202ENST00000546080 HRH4Q9H3N8 390 aa12.76□□□□□ -0.37
SRP54-202ENST00000546080 CYTL1Q9NRR1 136 aa12.76□□□□□ -0.37
SRP54-202ENST00000546080 RCC2Q9P258 522 aaKnown RBP12.76□□□□□ -0.37
SRP54-202ENST00000546080 SPTBP11277 2137 aa12.76□□□□□ -0.37
SRP54-202ENST00000546080 METTL21EPA6NDL7 271 aa12.76□□□□□ -0.37
SRP54-202ENST00000546080 EFSO43281 561 aa12.76□□□□□ -0.37
SRP54-202ENST00000546080 OIP5O43482 229 aa12.76□□□□□ -0.37
SRP54-202ENST00000546080 FABP1P07148 127 aa12.76□□□□□ -0.37
SRP54-202ENST00000546080 ZNF806P0C7X5 589 aa12.76□□□□□ -0.37
SRP54-202ENST00000546080 MUC1P15941 1255 aaPredicted RBP12.76□□□□□ -0.37
SRP54-202ENST00000546080 CX3CR1P49238 355 aa12.76□□□□□ -0.37
SRP54-202ENST00000546080 SNRPEP62304 92 aaKnown RBP12.76□□□□□ -0.37
SRP54-202ENST00000546080 EIF2B1Q14232 305 aaKnown RBP12.76□□□□□ -0.37
SRP54-202ENST00000546080 CD226Q15762 336 aa12.76□□□□□ -0.37
SRP54-202ENST00000546080 SMAD2Q15796 467 aaKnown RBP12.76□□□□□ -0.37
SRP54-202ENST00000546080 MST1LQ2TV78 715 aa12.76□□□□□ -0.37
SRP54-202ENST00000546080 ZNF260Q3ZCT1 412 aa12.76□□□□□ -0.37
SRP54-202ENST00000546080 KCTD18Q6PI47 426 aaPredicted RBP12.76□□□□□ -0.37
SRP54-202ENST00000546080 DRAM2Q6UX65 266 aa12.76□□□□□ -0.37
SRP54-202ENST00000546080 CHST4Q8NCG5 386 aa12.76□□□□□ -0.37
SRP54-202ENST00000546080 CDC6Q99741 560 aa12.76□□□□□ -0.37
SRP54-202ENST00000546080 RHOFQ9HBH0 211 aa12.76□□□□□ -0.37
SRP54-202ENST00000546080 ACKR4Q9NPB9 350 aa12.76□□□□□ -0.37
SRP54-202ENST00000546080 LPAR3Q9UBY5 353 aa12.76□□□□□ -0.37
SRP54-202ENST00000546080 A0A0C4DFX4 3053 aa12.75□□□□□ -0.37
SRP54-202ENST00000546080 TRBV6-7A0A0A0MS04 114 aa12.75□□□□□ -0.37
SRP54-202ENST00000546080 C2orf74A8MZ97 194 aa12.75□□□□□ -0.37
SRP54-202ENST00000546080 C11orf98E9PRG8 122 aa12.75□□□□□ -0.37
SRP54-202ENST00000546080 TGFBR3LH3BV60 316 aa12.75□□□□□ -0.37
SRP54-202ENST00000546080 IFNA6P05013 189 aa12.75□□□□□ -0.37
SRP54-202ENST00000546080 S100A8P05109 93 aa12.75□□□□□ -0.37
SRP54-202ENST00000546080 FAM157CP0CG43 387 aa12.75□□□□□ -0.37
SRP54-202ENST00000546080 FOLR2P14207 255 aa12.75□□□□□ -0.37
SRP54-202ENST00000546080 MAOAP21397 527 aa12.75□□□□□ -0.37
SRP54-202ENST00000546080 CTNNB1P35222 781 aa12.75□□□□□ -0.37
SRP54-202ENST00000546080 HRH1P35367 487 aa12.75□□□□□ -0.37
SRP54-202ENST00000546080 POLR2GP62487 172 aaKnown RBP eCLIP12.75□□□□□ -0.37
SRP54-202ENST00000546080 CYCSP99999 105 aaKnown RBP12.75□□□□□ -0.37
SRP54-202ENST00000546080 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.75□□□□□ -0.37
SRP54-202ENST00000546080 ZNF776Q68DI1 518 aaPredicted RBP12.75□□□□□ -0.37
SRP54-202ENST00000546080 ZNF585AQ6P3V2 769 aa12.75□□□□□ -0.37
SRP54-202ENST00000546080 TMEM200AQ86VY9 491 aa12.75□□□□□ -0.37
SRP54-202ENST00000546080 CATSPERDQ86XM0 798 aa12.75□□□□□ -0.37
SRP54-202ENST00000546080 ZSCAN4Q8NAM6 433 aaPredicted RBP12.75□□□□□ -0.37
SRP54-202ENST00000546080 OR6S1Q8NH40 331 aa12.75□□□□□ -0.37
SRP54-202ENST00000546080 C16orf52Q8NHV5 167 aa12.75□□□□□ -0.37
SRP54-202ENST00000546080 ZNF563Q8TA94 476 aa12.75□□□□□ -0.37
SRP54-202ENST00000546080 TAAR8Q969N4 342 aa12.75□□□□□ -0.37
SRP54-202ENST00000546080 TSACCQ96A04 125 aaPredicted RBP12.75□□□□□ -0.37
SRP54-202ENST00000546080 PTX4Q96A99 478 aa12.75□□□□□ -0.37
SRP54-202ENST00000546080 RRNAD1Q96FB5 475 aaKnown RBP12.75□□□□□ -0.37
SRP54-202ENST00000546080 DGAT2Q96PD7 388 aa12.75□□□□□ -0.37
SRP54-202ENST00000546080 GDF2Q9UK05 429 aaPredicted RBP12.75□□□□□ -0.37
SRP54-202ENST00000546080 B9D1Q9UPM9 204 aa12.75□□□□□ -0.37
SRP54-202ENST00000546080 TBC1D3DA0A087WVF3 549 aa12.74□□□□□ -0.37
SRP54-202ENST00000546080 POM121BA6NF01 834 aa12.74□□□□□ -0.37
SRP54-202ENST00000546080 DBX1A6NMT0 343 aa12.74□□□□□ -0.37
SRP54-202ENST00000546080 COLCA2A8K830 154 aa12.74□□□□□ -0.37
SRP54-202ENST00000546080 TBC1D3LB9A6J9 549 aa12.74□□□□□ -0.37
SRP54-202ENST00000546080 APBB3O95704 486 aa12.74□□□□□ -0.37
SRP54-202ENST00000546080 TBC1D3HP0C7X1 549 aa12.74□□□□□ -0.37
SRP54-202ENST00000546080 RAB6AP20340 208 aa12.74□□□□□ -0.37
SRP54-202ENST00000546080 HABP2Q14520 560 aaPredicted RBP12.74□□□□□ -0.37
SRP54-202ENST00000546080 SLC22A6Q4U2R8 563 aa12.74□□□□□ -0.37
SRP54-202ENST00000546080 IGSF11Q5DX21 431 aa12.74□□□□□ -0.37
SRP54-202ENST00000546080 FAM209BQ5JX69 171 aa12.74□□□□□ -0.37
SRP54-202ENST00000546080 TBC1D3CQ6IPX1 549 aa12.74□□□□□ -0.37
SRP54-202ENST00000546080 CBLN3Q6UW01 205 aa12.74□□□□□ -0.37
SRP54-202ENST00000546080 SLC16A13Q7RTY0 426 aa12.74□□□□□ -0.37
SRP54-202ENST00000546080 MISPQ8IVT2 679 aa12.74□□□□□ -0.37
SRP54-202ENST00000546080 TBC1D3Q8IZP1 549 aaPredicted RBP12.74□□□□□ -0.37
SRP54-202ENST00000546080 NUDCD2Q8WVJ2 157 aa12.74□□□□□ -0.37
SRP54-202ENST00000546080 DNAJA3Q96EY1 480 aa12.74□□□□□ -0.37
SRP54-202ENST00000546080 ASB16Q96NS5 453 aa12.74□□□□□ -0.37
SRP54-202ENST00000546080 MICU1Q9BPX6 476 aa12.74□□□□□ -0.37
SRP54-202ENST00000546080 RNF126Q9BV68 326 aa12.74□□□□□ -0.37
SRP54-202ENST00000546080 WBP1LQ9NX94 342 aa12.74□□□□□ -0.37
SRP54-202ENST00000546080 PCOLCE2Q9UKZ9 415 aa12.74□□□□□ -0.37
SRP54-202ENST00000546080 HHLA2Q9UM44 414 aa12.74□□□□□ -0.37
SRP54-202ENST00000546080 MRPS33Q9Y291 106 aaKnown RBP12.74□□□□□ -0.37
SRP54-202ENST00000546080 LRP12Q9Y561 859 aa12.74□□□□□ -0.37
SRP54-202ENST00000546080 HEATR5AQ86XA9 2040 aa12.74□□□□□ -0.37
SRP54-202ENST00000546080 PLRG1O43660 514 aaKnown RBP12.74□□□□□ -0.37
SRP54-202ENST00000546080 GNRH1P01148 92 aa12.74□□□□□ -0.37
SRP54-202ENST00000546080 SFTA3P0C7M3 94 aa12.74□□□□□ -0.37
SRP54-202ENST00000546080 CD37P11049 281 aa12.74□□□□□ -0.37
SRP54-202ENST00000546080 GDI1P31150 447 aa12.74□□□□□ -0.37
SRP54-202ENST00000546080 GJA4P35212 333 aa12.74□□□□□ -0.37
SRP54-202ENST00000546080 CAV2P51636 162 aa12.74□□□□□ -0.37
SRP54-202ENST00000546080 TAS2R31P59538 309 aa12.74□□□□□ -0.37
SRP54-202ENST00000546080 ROM1Q03395 351 aa12.74□□□□□ -0.37
SRP54-202ENST00000546080 ECH1Q13011 328 aa12.74□□□□□ -0.37
SRP54-202ENST00000546080 SKP2Q13309 424 aa12.74□□□□□ -0.37
SRP54-202ENST00000546080 BIKQ13323 160 aa12.74□□□□□ -0.37
SRP54-202ENST00000546080 SMCO1Q147U7 214 aa12.74□□□□□ -0.37
SRP54-202ENST00000546080 AWAT2Q6E213 333 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms