RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 PAQR4Q8N4S7 273 aaPredicted RBP11.8□□□□□ -0.52
SP140-213ENST00000543928 OR1J2Q8NGS2 313 aa11.8□□□□□ -0.52
SP140-213ENST00000543928 OR1F12Q8NHA8 337 aa11.8□□□□□ -0.52
SP140-213ENST00000543928 LILRB1Q8NHL6 650 aaPredicted RBP11.8□□□□□ -0.52
SP140-213ENST00000543928 RHOXF1Q8NHV9 184 aa11.8□□□□□ -0.52
SP140-213ENST00000543928 MAP6Q96JE9 813 aa11.8□□□□□ -0.52
SP140-213ENST00000543928 CDH20Q9HBT6 801 aa11.8□□□□□ -0.52
SP140-213ENST00000543928 WARS2Q9UGM6 360 aaKnown RBP11.8□□□□□ -0.52
SP140-213ENST00000543928 POU2F3Q9UKI9 436 aa11.8□□□□□ -0.52
SP140-213ENST00000543928 CACNA1DQ01668 2161 aa11.79□□□□□ -0.52
SP140-213ENST00000543928 AKAP6Q13023 2319 aa11.79□□□□□ -0.52
SP140-213ENST00000543928 LOC100509620A0A075B734 347 aa11.79□□□□□ -0.52
SP140-213ENST00000543928 C5orf49A4QMS7 147 aa11.79□□□□□ -0.52
SP140-213ENST00000543928 OR6C6A6NF89 314 aa11.79□□□□□ -0.52
SP140-213ENST00000543928 COX5BP10606 129 aa11.79□□□□□ -0.52
SP140-213ENST00000543928 KRTAP10-9P60411 292 aa11.79□□□□□ -0.52
SP140-213ENST00000543928 IL5RAQ01344 420 aa11.79□□□□□ -0.52
SP140-213ENST00000543928 GALK2Q01415 458 aa11.79□□□□□ -0.52
SP140-213ENST00000543928 HGFACQ04756 655 aa11.79□□□□□ -0.52
SP140-213ENST00000543928 IL18R1Q13478 541 aa11.79□□□□□ -0.52
SP140-213ENST00000543928 EIF2B1Q14232 305 aaKnown RBP11.79□□□□□ -0.52
SP140-213ENST00000543928 GGTLC2Q14390 218 aa11.79□□□□□ -0.52
SP140-213ENST00000543928 IZUMO2Q6UXV1 221 aa11.79□□□□□ -0.52
SP140-213ENST00000543928 SHFQ7M4L6 423 aa11.79□□□□□ -0.52
SP140-213ENST00000543928 SLC16A9Q7RTY1 509 aa11.79□□□□□ -0.52
SP140-213ENST00000543928 SETD9Q8NE22 299 aa11.79□□□□□ -0.52
SP140-213ENST00000543928 SMAP2Q8WU79 429 aaPredicted RBP11.79□□□□□ -0.52
SP140-213ENST00000543928 SLC7A6Q92536 515 aa11.79□□□□□ -0.52
SP140-213ENST00000543928 AKAP1Q92667 903 aaKnown RBP eCLIP11.79□□□□□ -0.52
SP140-213ENST00000543928 TFAP2CQ92754 450 aa11.79□□□□□ -0.52
SP140-213ENST00000543928 RFKQ969G6 155 aa11.79□□□□□ -0.52
SP140-213ENST00000543928 POM121L2Q96KW2 1035 aa11.79□□□□□ -0.52
SP140-213ENST00000543928 CNN2Q99439 309 aaKnown RBP11.79□□□□□ -0.52
SP140-213ENST00000543928 HDHD2Q9H0R4 259 aa11.79□□□□□ -0.52
SP140-213ENST00000543928 PLEKHF2Q9H8W4 249 aa11.79□□□□□ -0.52
SP140-213ENST00000543928 ADGRL4Q9HBW9 690 aa11.79□□□□□ -0.52
SP140-213ENST00000543928 PNRC2Q9NPJ4 139 aaKnown RBP11.79□□□□□ -0.52
SP140-213ENST00000543928 CLN6Q9NWW5 311 aa11.79□□□□□ -0.52
SP140-213ENST00000543928 HAO2Q9NYQ3 351 aa11.79□□□□□ -0.52
SP140-213ENST00000543928 ATP23Q9Y6H3 246 aa11.79□□□□□ -0.52
SP140-213ENST00000543928 FBN2P35556 2912 aa11.78□□□□□ -0.52
SP140-213ENST00000543928 E7EQL1 145 aa11.78□□□□□ -0.52
SP140-213ENST00000543928 GNAO1P09471 354 aa11.78□□□□□ -0.52
SP140-213ENST00000543928 VHLP40337 213 aa11.78□□□□□ -0.52
SP140-213ENST00000543928 HCCSP53701 268 aa11.78□□□□□ -0.52
SP140-213ENST00000543928 TMED1Q13445 227 aa11.78□□□□□ -0.52
SP140-213ENST00000543928 MAD2L1BPQ15013 274 aaPredicted RBP11.78□□□□□ -0.52
SP140-213ENST00000543928 ZNF672Q499Z4 452 aaPredicted RBP11.78□□□□□ -0.52
SP140-213ENST00000543928 C6orf52Q5T4I8 152 aa11.78□□□□□ -0.52
SP140-213ENST00000543928 KRT80Q6KB66 452 aa11.78□□□□□ -0.52
SP140-213ENST00000543928 SPATC1Q76KD6 591 aa11.78□□□□□ -0.52
SP140-213ENST00000543928 ZNF454Q8N9F8 522 aa11.78□□□□□ -0.52
SP140-213ENST00000543928 OR4F15Q8NGB8 312 aa11.78□□□□□ -0.52
SP140-213ENST00000543928 OR51G2Q8NGK0 314 aa11.78□□□□□ -0.52
SP140-213ENST00000543928 OR10S1Q8NGN2 331 aa11.78□□□□□ -0.52
SP140-213ENST00000543928 OTOSQ8NHW6 89 aa11.78□□□□□ -0.52
SP140-213ENST00000543928 ST7LQ8TDW4 575 aa11.78□□□□□ -0.52
SP140-213ENST00000543928 APH1BQ8WW43 257 aa11.78□□□□□ -0.52
SP140-213ENST00000543928 Q96MT0 163 aa11.78□□□□□ -0.52
SP140-213ENST00000543928 COQ7Q99807 217 aa11.78□□□□□ -0.52
SP140-213ENST00000543928 ATF6BQ99941 703 aa11.78□□□□□ -0.52
SP140-213ENST00000543928 ABHD6Q9BV23 337 aa11.78□□□□□ -0.52
SP140-213ENST00000543928 YIPF3Q9GZM5 350 aa11.78□□□□□ -0.52
SP140-213ENST00000543928 UBTD1Q9HAC8 227 aa11.78□□□□□ -0.52
SP140-213ENST00000543928 CISD1Q9NZ45 108 aaKnown RBP11.78□□□□□ -0.52
SP140-213ENST00000543928 ATPIF1Q9UII2 106 aa11.78□□□□□ -0.52
SP140-213ENST00000543928 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.78□□□□□ -0.52
SP140-213ENST00000543928 SPG11Q96JI7 2443 aa11.78□□□□□ -0.52
SP140-213ENST00000543928 SNTNA6NMZ2 147 aa11.77□□□□□ -0.53
SP140-213ENST00000543928 HS3ST1O14792 307 aa11.77□□□□□ -0.53
SP140-213ENST00000543928 WBP4O75554 376 aaKnown RBP11.77□□□□□ -0.53
SP140-213ENST00000543928 DBHP09172 617 aa11.77□□□□□ -0.53
SP140-213ENST00000543928 FAM157BP0CG42 384 aa11.77□□□□□ -0.53
SP140-213ENST00000543928 NR4A1P22736 598 aa11.77□□□□□ -0.53
SP140-213ENST00000543928 ISL1P61371 349 aa11.77□□□□□ -0.53
SP140-213ENST00000543928 NKX6-1P78426 367 aaPredicted RBP11.77□□□□□ -0.53
SP140-213ENST00000543928 ECH1Q13011 328 aa11.77□□□□□ -0.53
SP140-213ENST00000543928 SNTB2Q13425 540 aaKnown RBP11.77□□□□□ -0.53
SP140-213ENST00000543928 USP51Q70EK9 711 aa11.77□□□□□ -0.53
SP140-213ENST00000543928 SLC35F2Q8IXU6 374 aa11.77□□□□□ -0.53
SP140-213ENST00000543928 C8orf59Q8N0T1 100 aaPredicted RBP11.77□□□□□ -0.53
SP140-213ENST00000543928 NUP37Q8NFH4 326 aa11.77□□□□□ -0.53
SP140-213ENST00000543928 CNIH3Q8TBE1 160 aa11.77□□□□□ -0.53
SP140-213ENST00000543928 THEM6Q8WUY1 208 aa11.77□□□□□ -0.53
SP140-213ENST00000543928 NRGNQ92686 78 aa11.77□□□□□ -0.53
SP140-213ENST00000543928 FBXW5Q969U6 566 aa11.77□□□□□ -0.53
SP140-213ENST00000543928 SLAMF6Q96DU3 332 aa11.77□□□□□ -0.53
SP140-213ENST00000543928 RNFT2Q96EX2 444 aa11.77□□□□□ -0.53
SP140-213ENST00000543928 AMELYQ99218 206 aa11.77□□□□□ -0.53
SP140-213ENST00000543928 OR51B6Q9H340 312 aa11.77□□□□□ -0.53
SP140-213ENST00000543928 CENPMQ9NSP4 180 aa11.77□□□□□ -0.53
SP140-213ENST00000543928 LAMP5Q9UJQ1 280 aa11.77□□□□□ -0.53
SP140-213ENST00000543928 KLHDC2Q9Y2U9 406 aa11.77□□□□□ -0.53
SP140-213ENST00000543928 SPEF1Q9Y4P9 236 aa11.77□□□□□ -0.53
SP140-213ENST00000543928 HSPE1-MOB4S4R3N1 261 aa11.77□□□□□ -0.53
SP140-213ENST00000543928 ZNF878C9JN71 531 aa11.76□□□□□ -0.53
SP140-213ENST00000543928 F5H5K5 113 aa11.76□□□□□ -0.53
SP140-213ENST00000543928 APOL3O95236 402 aa11.76□□□□□ -0.53
SP140-213ENST00000543928 LYNP07948 512 aa11.76□□□□□ -0.53
SP140-213ENST00000543928 SBK2P0C263 348 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms