RNA–Protein interactions for RNA: ENST00000543766.2

VPS13D-212, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2 BASIC

Gene VPS13D, Length 3,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-212ENST00000543766 SIDT1Q9NXL6 827 aaKnown RBP8.04□□□□□ -1.12
VPS13D-212ENST00000543766 GALPQ9UBC7 116 aa8.04□□□□□ -1.12
VPS13D-212ENST00000543766 TMEFF2Q9UIK5 374 aaPredicted RBP8.04□□□□□ -1.12
VPS13D-212ENST00000543766 COL4A5P29400 1685 aa8.04□□□□□ -1.12
VPS13D-212ENST00000543766 A0A096LPK6 155 aa8.04□□□□□ -1.12
VPS13D-212ENST00000543766 DDTLA6NHG4 134 aaPredicted RBP8.04□□□□□ -1.12
VPS13D-212ENST00000543766 SLC16A7O60669 478 aa8.04□□□□□ -1.12
VPS13D-212ENST00000543766 SERPIND1P05546 499 aa8.04□□□□□ -1.12
VPS13D-212ENST00000543766 ZNF37AP17032 561 aaPredicted RBP8.04□□□□□ -1.12
VPS13D-212ENST00000543766 NTSR1P30989 418 aa8.04□□□□□ -1.12
VPS13D-212ENST00000543766 TIMP3P35625 211 aa8.04□□□□□ -1.12
VPS13D-212ENST00000543766 ZFP36L2P47974 494 aaKnown RBP8.04□□□□□ -1.12
VPS13D-212ENST00000543766 RAB38P57729 211 aa8.04□□□□□ -1.12
VPS13D-212ENST00000543766 ZP1P60852 638 aa8.04□□□□□ -1.12
VPS13D-212ENST00000543766 PAX2Q02962 417 aa8.04□□□□□ -1.12
VPS13D-212ENST00000543766 IL10RBQ08334 325 aa8.04□□□□□ -1.12
VPS13D-212ENST00000543766 PGM5Q15124 567 aa8.04□□□□□ -1.12
VPS13D-212ENST00000543766 TAF13Q15543 124 aa8.04□□□□□ -1.12
VPS13D-212ENST00000543766 QRICH1Q2TAL8 776 aa8.04□□□□□ -1.12
VPS13D-212ENST00000543766 TMEM41BQ5BJD5 291 aa8.04□□□□□ -1.12
VPS13D-212ENST00000543766 OR2G6Q5TZ20 316 aa8.04□□□□□ -1.12
VPS13D-212ENST00000543766 FCRLAQ7L513 359 aa8.04□□□□□ -1.12
VPS13D-212ENST00000543766 OR4S2Q8NH73 311 aa8.04□□□□□ -1.12
VPS13D-212ENST00000543766 TFGQ92734 400 aaPredicted RBP8.04□□□□□ -1.12
VPS13D-212ENST00000543766 PTH2Q96A98 100 aa8.04□□□□□ -1.12
VPS13D-212ENST00000543766 DDOQ99489 341 aa8.04□□□□□ -1.12
VPS13D-212ENST00000543766 PPDPFQ9H3Y8 114 aa8.04□□□□□ -1.12
VPS13D-212ENST00000543766 NECAP2Q9NVZ3 263 aa8.04□□□□□ -1.12
VPS13D-212ENST00000543766 ZNF586Q9NXT0 402 aa8.04□□□□□ -1.12
VPS13D-212ENST00000543766 CCDC167Q9P0B6 97 aa8.04□□□□□ -1.12
VPS13D-212ENST00000543766 ZNF490Q9ULM2 529 aaPredicted RBP8.04□□□□□ -1.12
VPS13D-212ENST00000543766 PSG8Q9UQ74 426 aa8.04□□□□□ -1.12
VPS13D-212ENST00000543766 ARL5AQ9Y689 179 aa8.04□□□□□ -1.12
VPS13D-212ENST00000543766 ABCA7Q8IZY2 2146 aa8.04□□□□□ -1.12
VPS13D-212ENST00000543766 ANKRD12Q6UB98 2062 aa8.04□□□□□ -1.12
VPS13D-212ENST00000543766 TVP23AA6NH52 213 aa8.03□□□□□ -1.12
VPS13D-212ENST00000543766 ZNF207O43670 478 aaKnown RBP8.03□□□□□ -1.12
VPS13D-212ENST00000543766 DLX3O60479 287 aa8.03□□□□□ -1.12
VPS13D-212ENST00000543766 MT-ND1P03886 318 aa8.03□□□□□ -1.12
VPS13D-212ENST00000543766 MT-ND4P03905 459 aa8.03□□□□□ -1.12
VPS13D-212ENST00000543766 HTR2CP28335 458 aa8.03□□□□□ -1.12
VPS13D-212ENST00000543766 AIMP2Q13155 320 aaKnown RBP8.03□□□□□ -1.12
VPS13D-212ENST00000543766 OR2F1Q13607 317 aa8.03□□□□□ -1.12
VPS13D-212ENST00000543766 RBBP7Q16576 425 aa8.03□□□□□ -1.12
VPS13D-212ENST00000543766 ATP6AP1LQ52LC2 224 aa8.03□□□□□ -1.12
VPS13D-212ENST00000543766 TMEM128Q5BJH2 165 aa8.03□□□□□ -1.12
VPS13D-212ENST00000543766 DOK6Q6PKX4 331 aa8.03□□□□□ -1.12
VPS13D-212ENST00000543766 C19orf48Q6RUI8 117 aa8.03□□□□□ -1.12
VPS13D-212ENST00000543766 ACVR1CQ8NER5 493 aa8.03□□□□□ -1.12
VPS13D-212ENST00000543766 NETO1Q8TDF5 533 aa8.03□□□□□ -1.12
VPS13D-212ENST00000543766 TMEM239Q8WW34 195 aa8.03□□□□□ -1.12
VPS13D-212ENST00000543766 DCUN1D4Q92564 292 aa8.03□□□□□ -1.12
VPS13D-212ENST00000543766 EPYCQ99645 322 aa8.03□□□□□ -1.12
VPS13D-212ENST00000543766 DUSP16Q9BY84 665 aa8.03□□□□□ -1.12
VPS13D-212ENST00000543766 HRH4Q9H3N8 390 aa8.03□□□□□ -1.12
VPS13D-212ENST00000543766 ACSS2Q9NR19 701 aa8.03□□□□□ -1.12
VPS13D-212ENST00000543766 FBXL17Q9UF56 701 aa8.03□□□□□ -1.12
VPS13D-212ENST00000543766 SMPXQ9UHP9 88 aa8.03□□□□□ -1.12
VPS13D-212ENST00000543766 SLC25A13Q9UJS0 675 aa8.03□□□□□ -1.12
VPS13D-212ENST00000543766 NPIPB5A8MRT5 1133 aa8.03□□□□□ -1.12
VPS13D-212ENST00000543766 HHLA1C9JL84 531 aa8.03□□□□□ -1.12
VPS13D-212ENST00000543766 CSO75390 466 aaKnown RBP8.03□□□□□ -1.12
VPS13D-212ENST00000543766 NDUFB10O96000 172 aa8.03□□□□□ -1.12
VPS13D-212ENST00000543766 ANKRD34CP0C6C1 535 aa8.03□□□□□ -1.12
VPS13D-212ENST00000543766 FAM157BP0CG42 384 aa8.03□□□□□ -1.12
VPS13D-212ENST00000543766 EPXP11678 715 aa8.03□□□□□ -1.12
VPS13D-212ENST00000543766 PSMA1P25786 263 aaKnown RBP8.03□□□□□ -1.12
VPS13D-212ENST00000543766 ACLYP53396 1101 aa8.03□□□□□ -1.12
VPS13D-212ENST00000543766 ZNF79Q15937 498 aa8.03□□□□□ -1.12
VPS13D-212ENST00000543766 RAB41Q5JT25 222 aa8.03□□□□□ -1.12
VPS13D-212ENST00000543766 UNQ5815/PRO19632Q6UWF5 114 aa8.03□□□□□ -1.12
VPS13D-212ENST00000543766 CENPVQ7Z7K6 275 aaPredicted RBP8.03□□□□□ -1.12
VPS13D-212ENST00000543766 LAPTM4BQ86VI4 370 aa8.03□□□□□ -1.12
VPS13D-212ENST00000543766 YAF2Q8IY57 180 aa8.03□□□□□ -1.12
VPS13D-212ENST00000543766 PBDC1Q9BVG4 233 aa8.03□□□□□ -1.12
VPS13D-212ENST00000543766 SLC39A8Q9C0K1 460 aa8.03□□□□□ -1.12
VPS13D-212ENST00000543766 TCEAL2Q9H3H9 227 aaPredicted RBP8.03□□□□□ -1.12
VPS13D-212ENST00000543766 TPT1P8Q9HAU6 139 aa8.03□□□□□ -1.12
VPS13D-212ENST00000543766 SLC2A4RGQ9NR83 387 aa8.03□□□□□ -1.12
VPS13D-212ENST00000543766 MED29Q9NX70 200 aa8.03□□□□□ -1.12
VPS13D-212ENST00000543766 PARP14Q460N5 1801 aa8.03□□□□□ -1.12
VPS13D-212ENST00000543766 USP34Q70CQ2 3546 aa8.03□□□□□ -1.12
VPS13D-212ENST00000543766 A0A0U1RRA0 63 aa8.03□□□□□ -1.12
VPS13D-212ENST00000543766 ASPDHA6ND91 283 aa8.03□□□□□ -1.12
VPS13D-212ENST00000543766 ITGA5P08648 1049 aa8.03□□□□□ -1.12
VPS13D-212ENST00000543766 ST6GAL1P15907 406 aa8.03□□□□□ -1.12
VPS13D-212ENST00000543766 GATA3P23771 443 aa8.03□□□□□ -1.12
VPS13D-212ENST00000543766 HTR1EP28566 365 aa8.03□□□□□ -1.12
VPS13D-212ENST00000543766 GLRXP35754 106 aa8.03□□□□□ -1.12
VPS13D-212ENST00000543766 SCAPQ12770 1279 aa8.03□□□□□ -1.12
VPS13D-212ENST00000543766 C1orf189Q5VU69 101 aa8.03□□□□□ -1.12
VPS13D-212ENST00000543766 FKBP1CQ5VVH2 108 aa8.03□□□□□ -1.12
VPS13D-212ENST00000543766 NKAIN2Q5VXU1 208 aa8.03□□□□□ -1.12
VPS13D-212ENST00000543766 DUX4L9Q6RFH8 374 aaPredicted RBP8.03□□□□□ -1.12
VPS13D-212ENST00000543766 HMGN2P46Q86SG4 172 aa8.03□□□□□ -1.12
VPS13D-212ENST00000543766 C17orf78Q8N4C9 275 aa8.03□□□□□ -1.12
VPS13D-212ENST00000543766 SLC26A10Q8NG04 563 aa8.03□□□□□ -1.12
VPS13D-212ENST00000543766 LMLNQ96KR4 655 aa8.03□□□□□ -1.12
VPS13D-212ENST00000543766 GNRHR2Q96P88 292 aa8.03□□□□□ -1.12
VPS13D-212ENST00000543766 ZNF391Q9UJN7 358 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms