RNA–Protein interactions for RNA: ENST00000543660.1

NPIPB4-219, Transcript of nuclear pore complex interacting protein family member B4, human

TSL 5

Gene NPIPB4, Length 353 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPB4-219	ENST00000543660	RPA2	P15927	270 aa		4.07	□□□□□ -1.76
NPIPB4-219	ENST00000543660	NCF2	P19878	526 aa	Predicted RBP	4.07	□□□□□ -1.76
NPIPB4-219	ENST00000543660	GCSH	P23434	173 aa		4.07	□□□□□ -1.76
NPIPB4-219	ENST00000543660	SLC6A2	P23975	617 aa		4.07	□□□□□ -1.76
NPIPB4-219	ENST00000543660	DUSP1	P28562	367 aa		4.07	□□□□□ -1.76
NPIPB4-219	ENST00000543660	SSTR1	P30872	391 aa		4.07	□□□□□ -1.76
NPIPB4-219	ENST00000543660	NTS	P30990	170 aa		4.07	□□□□□ -1.76
NPIPB4-219	ENST00000543660	SPR	P35270	261 aa	Predicted RBP	4.07	□□□□□ -1.76
NPIPB4-219	ENST00000543660	CRYBB2	P43320	205 aa		4.07	□□□□□ -1.76
NPIPB4-219	ENST00000543660	MAGEB1	P43366	347 aa		4.07	□□□□□ -1.76
NPIPB4-219	ENST00000543660	IER3	P46695	156 aa		4.07	□□□□□ -1.76
NPIPB4-219	ENST00000543660	NPBWR1	P48145	328 aa		4.07	□□□□□ -1.76
NPIPB4-219	ENST00000543660	ATP12A	P54707	1039 aa		4.07	□□□□□ -1.76
NPIPB4-219	ENST00000543660	MERTK	Q12866	999 aa		4.07	□□□□□ -1.76
NPIPB4-219	ENST00000543660	PDIA2	Q13087	525 aa	Known RBP	4.07	□□□□□ -1.76
NPIPB4-219	ENST00000543660	ZNF154	Q13106	437 aa		4.07	□□□□□ -1.76
NPIPB4-219	ENST00000543660	SKP2	Q13309	424 aa		4.07	□□□□□ -1.76
NPIPB4-219	ENST00000543660	FAM83E	Q2M2I3	478 aa		4.07	□□□□□ -1.76
NPIPB4-219	ENST00000543660	C2orf68	Q2NKX9	166 aa		4.07	□□□□□ -1.76
NPIPB4-219	ENST00000543660	ATP6AP1L	Q52LC2	224 aa		4.07	□□□□□ -1.76
NPIPB4-219	ENST00000543660	SPIN4	Q56A73	249 aa		4.07	□□□□□ -1.76
NPIPB4-219	ENST00000543660	OTUD3	Q5T2D3	398 aa	Predicted RBP	4.07	□□□□□ -1.76
NPIPB4-219	ENST00000543660	MOB3C	Q70IA8	216 aa		4.07	□□□□□ -1.76
NPIPB4-219	ENST00000543660	CYS1	Q717R9	158 aa		4.07	□□□□□ -1.76
NPIPB4-219	ENST00000543660	COX18	Q8N8Q8	333 aa		4.07	□□□□□ -1.76
NPIPB4-219	ENST00000543660	TMEM185A	Q8NFB2	350 aa		4.07	□□□□□ -1.76
NPIPB4-219	ENST00000543660	OR52J3	Q8NH60	311 aa		4.07	□□□□□ -1.76
NPIPB4-219	ENST00000543660	LINC01006	Q8NI28	216 aa		4.07	□□□□□ -1.76
NPIPB4-219	ENST00000543660	ST8SIA1	Q92185	356 aa		4.07	□□□□□ -1.76
NPIPB4-219	ENST00000543660	DPF1	Q92782	380 aa		4.07	□□□□□ -1.76
NPIPB4-219	ENST00000543660	RAB8B	Q92930	207 aa		4.07	□□□□□ -1.76
NPIPB4-219	ENST00000543660	ST6GALNAC6	Q969X2	333 aa		4.07	□□□□□ -1.76
NPIPB4-219	ENST00000543660	RASD2	Q96D21	266 aa		4.07	□□□□□ -1.76
NPIPB4-219	ENST00000543660	RRNAD1	Q96FB5	475 aa	Known RBP	4.07	□□□□□ -1.76
NPIPB4-219	ENST00000543660	AURKB	Q96GD4	344 aa	Predicted RBP	4.07	□□□□□ -1.76
NPIPB4-219	ENST00000543660	ZNF385A	Q96PM9	386 aa	Known RBP	4.07	□□□□□ -1.76
NPIPB4-219	ENST00000543660	OSBPL9	Q96SU4	736 aa		4.07	□□□□□ -1.76
NPIPB4-219	ENST00000543660	BCL7B	Q9BQE9	202 aa		4.07	□□□□□ -1.76
NPIPB4-219	ENST00000543660	SYT3	Q9BQG1	590 aa		4.07	□□□□□ -1.76
NPIPB4-219	ENST00000543660	OR11A1	Q9GZK7	315 aa		4.07	□□□□□ -1.76
NPIPB4-219	ENST00000543660	MOV10	Q9HCE1	1003 aa	Known RBP	4.07	□□□□□ -1.76
NPIPB4-219	ENST00000543660	CTPS2	Q9NRF8	586 aa		4.07	□□□□□ -1.76
NPIPB4-219	ENST00000543660	ACER3	Q9NUN7	267 aa		4.07	□□□□□ -1.76
NPIPB4-219	ENST00000543660	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	4.07	□□□□□ -1.76
NPIPB4-219	ENST00000543660	SIRT5	Q9NXA8	310 aa		4.07	□□□□□ -1.76
NPIPB4-219	ENST00000543660	TXNDC16	Q9P2K2	825 aa		4.07	□□□□□ -1.76
NPIPB4-219	ENST00000543660	PURG	Q9UJV8	347 aa	Known RBP	4.07	□□□□□ -1.76
NPIPB4-219	ENST00000543660	HDGFL3	Q9Y3E1	203 aa		4.07	□□□□□ -1.76
NPIPB4-219	ENST00000543660	LYST	Q99698	3801 aa		4.07	□□□□□ -1.76
NPIPB4-219	ENST00000543660	IGHV3OR16-10	A0A075B7F0	116 aa		4.06	□□□□□ -1.76
NPIPB4-219	ENST00000543660	TCRBV9S1A1T	A0A576	114 aa		4.06	□□□□□ -1.76
NPIPB4-219	ENST00000543660	PCP4L1	A6NKN8	68 aa		4.06	□□□□□ -1.76
NPIPB4-219	ENST00000543660	SRRM5	B3KS81	715 aa		4.06	□□□□□ -1.76
NPIPB4-219	ENST00000543660	MCIDAS	D6RGH6	385 aa		4.06	□□□□□ -1.76
NPIPB4-219	ENST00000543660	NPIPB11	E5RHQ5	1161 aa		4.06	□□□□□ -1.76
NPIPB4-219	ENST00000543660	ZNF587B	E7ETH6	402 aa		4.06	□□□□□ -1.76
NPIPB4-219	ENST00000543660		K7EQM0	130 aa		4.06	□□□□□ -1.76
NPIPB4-219	ENST00000543660	PSPN	O60542	156 aa		4.06	□□□□□ -1.76
NPIPB4-219	ENST00000543660	EIF1B	O60739	113 aa	Known RBP	4.06	□□□□□ -1.76
NPIPB4-219	ENST00000543660	FOXH1	O75593	365 aa		4.06	□□□□□ -1.76
NPIPB4-219	ENST00000543660	UPK3A	O75631	287 aa		4.06	□□□□□ -1.76
NPIPB4-219	ENST00000543660	SERPINI2	O75830	405 aa		4.06	□□□□□ -1.76
NPIPB4-219	ENST00000543660	OR4F21	O95013	312 aa		4.06	□□□□□ -1.76
NPIPB4-219	ENST00000543660	KLHL2	O95198	593 aa		4.06	□□□□□ -1.76
NPIPB4-219	ENST00000543660	OTC	P00480	354 aa		4.06	□□□□□ -1.76
NPIPB4-219	ENST00000543660	CRYBA1	P05813	215 aa		4.06	□□□□□ -1.76
NPIPB4-219	ENST00000543660	LIPF	P07098	398 aa		4.06	□□□□□ -1.76
NPIPB4-219	ENST00000543660	RPS17	P08708	135 aa	Known RBP	4.06	□□□□□ -1.76
NPIPB4-219	ENST00000543660	ALOX5	P09917	674 aa		4.06	□□□□□ -1.76
NPIPB4-219	ENST00000543660	ALDOC	P09972	364 aa	Known RBP	4.06	□□□□□ -1.76
NPIPB4-219	ENST00000543660	SPP1	P10451	314 aa		4.06	□□□□□ -1.76
NPIPB4-219	ENST00000543660	BCKDHA	P12694	445 aa		4.06	□□□□□ -1.76
NPIPB4-219	ENST00000543660	ZNF35	P13682	527 aa		4.06	□□□□□ -1.76
NPIPB4-219	ENST00000543660	ZNF12	P17014	697 aa		4.06	□□□□□ -1.76
NPIPB4-219	ENST00000543660	TSPAN8	P19075	237 aa		4.06	□□□□□ -1.76
NPIPB4-219	ENST00000543660	HOXA5	P20719	270 aa		4.06	□□□□□ -1.76
NPIPB4-219	ENST00000543660	SLC6A6	P31641	620 aa		4.06	□□□□□ -1.76
NPIPB4-219	ENST00000543660	BMI1	P35226	326 aa		4.06	□□□□□ -1.76
NPIPB4-219	ENST00000543660	GLRX	P35754	106 aa		4.06	□□□□□ -1.76
NPIPB4-219	ENST00000543660	ARR3	P36575	388 aa		4.06	□□□□□ -1.76
NPIPB4-219	ENST00000543660	APOBEC1	P41238	236 aa	Known RBP	4.06	□□□□□ -1.76
NPIPB4-219	ENST00000543660	SELENOP	P49908	381 aa		4.06	□□□□□ -1.76
NPIPB4-219	ENST00000543660	HTR6	P50406	440 aa		4.06	□□□□□ -1.76
NPIPB4-219	ENST00000543660	CCR4	P51679	360 aa		4.06	□□□□□ -1.76
NPIPB4-219	ENST00000543660	OR2B6	P58173	313 aa		4.06	□□□□□ -1.76
NPIPB4-219	ENST00000543660	CCL8	P80075	99 aa		4.06	□□□□□ -1.76
NPIPB4-219	ENST00000543660	ZNF763	Q0D2J5	394 aa		4.06	□□□□□ -1.76
NPIPB4-219	ENST00000543660	LCP2	Q13094	533 aa		4.06	□□□□□ -1.76
NPIPB4-219	ENST00000543660	LARS2	Q15031	903 aa	Known RBP	4.06	□□□□□ -1.76
NPIPB4-219	ENST00000543660	SSX2	Q16385	188 aa		4.06	□□□□□ -1.76
NPIPB4-219	ENST00000543660	TECRL	Q5HYJ1	363 aa		4.06	□□□□□ -1.76
NPIPB4-219	ENST00000543660	GRTP1	Q5TC63	336 aa		4.06	□□□□□ -1.76
NPIPB4-219	ENST00000543660	AAED1	Q7RTV5	226 aa		4.06	□□□□□ -1.76
NPIPB4-219	ENST00000543660	ABHD12B	Q7Z5M8	362 aa	Predicted RBP	4.06	□□□□□ -1.76
NPIPB4-219	ENST00000543660	TBC1D26	Q86UD7	250 aa		4.06	□□□□□ -1.76
NPIPB4-219	ENST00000543660	RTN4RL2	Q86UN3	420 aa		4.06	□□□□□ -1.76
NPIPB4-219	ENST00000543660	MDP1	Q86V88	176 aa		4.06	□□□□□ -1.76
NPIPB4-219	ENST00000543660	SLC22A9	Q8IVM8	553 aa		4.06	□□□□□ -1.76
NPIPB4-219	ENST00000543660	GSPT2	Q8IYD1	628 aa	Known RBP	4.06	□□□□□ -1.76
NPIPB4-219	ENST00000543660	ZBED8	Q8IZ13	594 aa		4.06	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms