RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-215ENST00000543359 OR6C68A6NDL8 312 aa11.12□□□□□ -0.63
TNFRSF1A-215ENST00000543359 B4DSR2 109 aa11.12□□□□□ -0.63
TNFRSF1A-215ENST00000543359 RER1O15258 196 aa11.12□□□□□ -0.63
TNFRSF1A-215ENST00000543359 PHF1O43189 567 aaPredicted RBP11.12□□□□□ -0.63
TNFRSF1A-215ENST00000543359 SPRY3O43610 288 aa11.12□□□□□ -0.63
TNFRSF1A-215ENST00000543359 OR10H3O60404 316 aa11.12□□□□□ -0.63
TNFRSF1A-215ENST00000543359 DEAF1O75398 565 aaPredicted RBP11.12□□□□□ -0.63
TNFRSF1A-215ENST00000543359 UBOX5O94941 541 aa11.12□□□□□ -0.63
TNFRSF1A-215ENST00000543359 ABHD16AO95870 558 aa11.12□□□□□ -0.63
TNFRSF1A-215ENST00000543359 TFP02787 698 aa11.12□□□□□ -0.63
TNFRSF1A-215ENST00000543359 CD55P08174 381 aa11.12□□□□□ -0.63
TNFRSF1A-215ENST00000543359 DBHP09172 617 aa11.12□□□□□ -0.63
TNFRSF1A-215ENST00000543359 HIST1H1CP16403 213 aaKnown RBP11.12□□□□□ -0.63
TNFRSF1A-215ENST00000543359 SRD5A1P18405 259 aa11.12□□□□□ -0.63
TNFRSF1A-215ENST00000543359 KITLGP21583 273 aa11.12□□□□□ -0.63
TNFRSF1A-215ENST00000543359 TUBG1P23258 451 aa11.12□□□□□ -0.63
TNFRSF1A-215ENST00000543359 SLC6A6P31641 620 aa11.12□□□□□ -0.63
TNFRSF1A-215ENST00000543359 HTR5AP47898 357 aa11.12□□□□□ -0.63
TNFRSF1A-215ENST00000543359 ARHGDIAP52565 204 aa11.12□□□□□ -0.63
TNFRSF1A-215ENST00000543359 MS4A2Q01362 244 aa11.12□□□□□ -0.63
TNFRSF1A-215ENST00000543359 TSPAN31Q12999 210 aa11.12□□□□□ -0.63
TNFRSF1A-215ENST00000543359 HNRNPA0Q13151 305 aaKnown RBP11.12□□□□□ -0.63
TNFRSF1A-215ENST00000543359 CDK5R2Q13319 367 aa11.12□□□□□ -0.63
TNFRSF1A-215ENST00000543359 MEP1BQ16820 701 aa11.12□□□□□ -0.63
TNFRSF1A-215ENST00000543359 KRTAP27-1Q3LI81 207 aa11.12□□□□□ -0.63
TNFRSF1A-215ENST00000543359 ZNF362Q5T0B9 420 aaPredicted RBP11.12□□□□□ -0.63
TNFRSF1A-215ENST00000543359 UNQ6126/PRO20091Q6UXV3 157 aa11.12□□□□□ -0.63
TNFRSF1A-215ENST00000543359 CYP2R1Q6VVX0 501 aa11.12□□□□□ -0.63
TNFRSF1A-215ENST00000543359 ZNF620Q6ZNG0 422 aa11.12□□□□□ -0.63
TNFRSF1A-215ENST00000543359 Q6ZR03 302 aa11.12□□□□□ -0.63
TNFRSF1A-215ENST00000543359 ZBTB46Q86UZ6 589 aa11.12□□□□□ -0.63
TNFRSF1A-215ENST00000543359 ZDHHC21Q8IVQ6 265 aa11.12□□□□□ -0.63
TNFRSF1A-215ENST00000543359 PHC2Q8IXK0 858 aa11.12□□□□□ -0.63
TNFRSF1A-215ENST00000543359 OR4K13Q8NH42 304 aa11.12□□□□□ -0.63
TNFRSF1A-215ENST00000543359 OR1F12Q8NHA8 337 aa11.12□□□□□ -0.63
TNFRSF1A-215ENST00000543359 NMNAT3Q96T66 252 aa11.12□□□□□ -0.63
TNFRSF1A-215ENST00000543359 BTBD10Q9BSF8 475 aa11.12□□□□□ -0.63
TNFRSF1A-215ENST00000543359 RERGLQ9H628 205 aa11.12□□□□□ -0.63
TNFRSF1A-215ENST00000543359 SAP30LQ9HAJ7 183 aa11.12□□□□□ -0.63
TNFRSF1A-215ENST00000543359 MSL2Q9HCI7 577 aa11.12□□□□□ -0.63
TNFRSF1A-215ENST00000543359 KRCC1Q9NPI7 259 aaPredicted RBP11.12□□□□□ -0.63
TNFRSF1A-215ENST00000543359 TUBG2Q9NRH3 451 aa11.12□□□□□ -0.63
TNFRSF1A-215ENST00000543359 CYSLTR2Q9NS75 346 aa11.12□□□□□ -0.63
TNFRSF1A-215ENST00000543359 PLEK2Q9NYT0 353 aa11.12□□□□□ -0.63
TNFRSF1A-215ENST00000543359 NBEAL1Q6ZS30 2694 aa11.12□□□□□ -0.63
TNFRSF1A-215ENST00000543359 ARHGAP32A7KAX9 2087 aa11.12□□□□□ -0.63
TNFRSF1A-215ENST00000543359 RNF212BA8MTL3 300 aa11.11□□□□□ -0.63
TNFRSF1A-215ENST00000543359 KRT36O76013 467 aa11.11□□□□□ -0.63
TNFRSF1A-215ENST00000543359 MT-ND5P03915 603 aa11.11□□□□□ -0.63
TNFRSF1A-215ENST00000543359 CRABP1P29762 137 aa11.11□□□□□ -0.63
TNFRSF1A-215ENST00000543359 RBMXP38159 391 aaKnown RBP11.11□□□□□ -0.63
TNFRSF1A-215ENST00000543359 LIPAP38571 399 aa11.11□□□□□ -0.63
TNFRSF1A-215ENST00000543359 ERFP50548 548 aa11.11□□□□□ -0.63
TNFRSF1A-215ENST00000543359 MNAT1P51948 309 aa11.11□□□□□ -0.63
TNFRSF1A-215ENST00000543359 TEKQ02763 1124 aa11.11□□□□□ -0.63
TNFRSF1A-215ENST00000543359 COX10Q12887 443 aa11.11□□□□□ -0.63
TNFRSF1A-215ENST00000543359 MTX3Q5HYI7 312 aa11.11□□□□□ -0.63
TNFRSF1A-215ENST00000543359 AVPI1Q5T686 147 aa11.11□□□□□ -0.63
TNFRSF1A-215ENST00000543359 LCN8Q6JVE9 175 aa11.11□□□□□ -0.63
TNFRSF1A-215ENST00000543359 LEG1Q6P5S2 330 aa11.11□□□□□ -0.63
TNFRSF1A-215ENST00000543359 ARL9Q6T311 187 aa11.11□□□□□ -0.63
TNFRSF1A-215ENST00000543359 RINLQ6ZS11 566 aa11.11□□□□□ -0.63
TNFRSF1A-215ENST00000543359 NPEPL1Q8NDH3 523 aa11.11□□□□□ -0.63
TNFRSF1A-215ENST00000543359 SLC26A10Q8NG04 563 aa11.11□□□□□ -0.63
TNFRSF1A-215ENST00000543359 GNPDA2Q8TDQ7 276 aa11.11□□□□□ -0.63
TNFRSF1A-215ENST00000543359 ELMOD3Q96FG2 381 aa11.11□□□□□ -0.63
TNFRSF1A-215ENST00000543359 TRIM15Q9C019 465 aa11.11□□□□□ -0.63
TNFRSF1A-215ENST00000543359 SRA1Q9HD15 236 aaKnown RBP11.11□□□□□ -0.63
TNFRSF1A-215ENST00000543359 DECR2Q9NUI1 292 aa11.11□□□□□ -0.63
TNFRSF1A-215ENST00000543359 VNN3Q9NY84 501 aa11.11□□□□□ -0.63
TNFRSF1A-215ENST00000543359 CGGBP1Q9UFW8 167 aaPredicted RBP11.11□□□□□ -0.63
TNFRSF1A-215ENST00000543359 ATPIF1Q9UII2 106 aa11.11□□□□□ -0.63
TNFRSF1A-215ENST00000543359 PURGQ9UJV8 347 aaKnown RBP11.11□□□□□ -0.63
TNFRSF1A-215ENST00000543359 TMCC3Q9ULS5 477 aa11.11□□□□□ -0.63
TNFRSF1A-215ENST00000543359 GRIP1Q9Y3R0 1128 aa11.11□□□□□ -0.63
TNFRSF1A-215ENST00000543359 WIPI2Q9Y4P8 454 aa11.11□□□□□ -0.63
TNFRSF1A-215ENST00000543359 DYSFO75923 2080 aa11.1□□□□□ -0.63
TNFRSF1A-215ENST00000543359 PLSCR5A0PG75 271 aa11.1□□□□□ -0.63
TNFRSF1A-215ENST00000543359 BHLHE40O14503 412 aa11.1□□□□□ -0.63
TNFRSF1A-215ENST00000543359 IDH3BO43837 385 aa11.1□□□□□ -0.63
TNFRSF1A-215ENST00000543359 FAM107AO95990 144 aa11.1□□□□□ -0.63
TNFRSF1A-215ENST00000543359 GASTP01350 101 aa11.1□□□□□ -0.63
TNFRSF1A-215ENST00000543359 GGT2P36268 569 aa11.1□□□□□ -0.63
TNFRSF1A-215ENST00000543359 IFNGR2P38484 337 aa11.1□□□□□ -0.63
TNFRSF1A-215ENST00000543359 MVKQ03426 396 aa11.1□□□□□ -0.63
TNFRSF1A-215ENST00000543359 TRIM25Q14258 630 aaKnown RBP11.1□□□□□ -0.63
TNFRSF1A-215ENST00000543359 CORO6Q6QEF8 472 aa11.1□□□□□ -0.63
TNFRSF1A-215ENST00000543359 ARHGAP24Q8N264 748 aa11.1□□□□□ -0.63
TNFRSF1A-215ENST00000543359 GJC3Q8NFK1 279 aa11.1□□□□□ -0.63
TNFRSF1A-215ENST00000543359 OR9Q2Q8NGE9 314 aa11.1□□□□□ -0.63
TNFRSF1A-215ENST00000543359 ZNRF4Q8WWF5 429 aa11.1□□□□□ -0.63
TNFRSF1A-215ENST00000543359 PTP4A1Q93096 173 aa11.1□□□□□ -0.63
TNFRSF1A-215ENST00000543359 TMEM186Q96B77 213 aa11.1□□□□□ -0.63
TNFRSF1A-215ENST00000543359 HAVCR1Q96D42 359 aa11.1□□□□□ -0.63
TNFRSF1A-215ENST00000543359 CMBLQ96DG6 245 aa11.1□□□□□ -0.63
TNFRSF1A-215ENST00000543359 DCLRE1CQ96SD1 692 aaKnown RBP11.1□□□□□ -0.63
TNFRSF1A-215ENST00000543359 COQ7Q99807 217 aa11.1□□□□□ -0.63
TNFRSF1A-215ENST00000543359 IFT27Q9BW83 186 aa11.1□□□□□ -0.63
TNFRSF1A-215ENST00000543359 PLA2G12AQ9BZM1 189 aa11.1□□□□□ -0.63
TNFRSF1A-215ENST00000543359 EGLN3Q9H6Z9 239 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms