RNA–Protein interactions for RNA: ENST00000542407.5

PDLIM5-221, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDLIM5, Length 2,979 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-221ENST00000542407 SNRPCP09234 159 aaKnown RBP7.22□□□□□ -1.25
PDLIM5-221ENST00000542407 CPMP14384 443 aa7.22□□□□□ -1.25
PDLIM5-221ENST00000542407 PSMB1P20618 241 aaKnown RBP7.22□□□□□ -1.25
PDLIM5-221ENST00000542407 PRKAG1P54619 331 aa7.22□□□□□ -1.25
PDLIM5-221ENST00000542407 PRR5P85299 388 aa7.22□□□□□ -1.25
PDLIM5-221ENST00000542407 E2F1Q01094 437 aa7.22□□□□□ -1.25
PDLIM5-221ENST00000542407 MGAT2Q10469 447 aa7.22□□□□□ -1.25
PDLIM5-221ENST00000542407 PYY3Q5JQD4 70 aa7.22□□□□□ -1.25
PDLIM5-221ENST00000542407 TMEM255AQ5JRV8 349 aa7.22□□□□□ -1.25
PDLIM5-221ENST00000542407 B3GNTL1Q67FW5 361 aaPredicted RBP7.22□□□□□ -1.25
PDLIM5-221ENST00000542407 MFSD12Q6NUT3 480 aa7.22□□□□□ -1.25
PDLIM5-221ENST00000542407 SKA3Q8IX90 412 aa7.22□□□□□ -1.25
PDLIM5-221ENST00000542407 ZNF679Q8IYX0 411 aa7.22□□□□□ -1.25
PDLIM5-221ENST00000542407 OR4K14Q8NGD5 310 aa7.22□□□□□ -1.25
PDLIM5-221ENST00000542407 OR4D9Q8NGE8 314 aa7.22□□□□□ -1.25
PDLIM5-221ENST00000542407 OR51Q1Q8NH59 317 aa7.22□□□□□ -1.25
PDLIM5-221ENST00000542407 ADIPOR1Q96A54 375 aa7.22□□□□□ -1.25
PDLIM5-221ENST00000542407 NECAB3Q96P71 396 aaPredicted RBP7.22□□□□□ -1.25
PDLIM5-221ENST00000542407 ZNF607Q96SK3 696 aa7.22□□□□□ -1.25
PDLIM5-221ENST00000542407 PLA2G12AQ9BZM1 189 aa7.22□□□□□ -1.25
PDLIM5-221ENST00000542407 SLC38A1Q9H2H9 487 aa7.22□□□□□ -1.25
PDLIM5-221ENST00000542407 SMOC1Q9H4F8 434 aa7.22□□□□□ -1.25
PDLIM5-221ENST00000542407 TMEM138Q9NPI0 162 aa7.22□□□□□ -1.25
PDLIM5-221ENST00000542407 EXOSC3Q9NQT5 275 aaKnown RBP7.22□□□□□ -1.25
PDLIM5-221ENST00000542407 CCDC88CQ9P219 2028 aa7.22□□□□□ -1.25
PDLIM5-221ENST00000542407 CACNA1IQ9P0X4 2223 aa7.22□□□□□ -1.25
PDLIM5-221ENST00000542407 LMO7DNF2Z398 122 aa7.22□□□□□ -1.25
PDLIM5-221ENST00000542407 M0R296 226 aa7.22□□□□□ -1.25
PDLIM5-221ENST00000542407 EREGO14944 169 aa7.22□□□□□ -1.25
PDLIM5-221ENST00000542407 CHST10O43529 356 aa7.22□□□□□ -1.25
PDLIM5-221ENST00000542407 CREBL2O60519 120 aaPredicted RBP7.22□□□□□ -1.25
PDLIM5-221ENST00000542407 ATP1B1P05026 303 aa7.22□□□□□ -1.25
PDLIM5-221ENST00000542407 GIPP09681 153 aaPredicted RBP7.22□□□□□ -1.25
PDLIM5-221ENST00000542407 OR2T7P0C7T2 308 aa7.22□□□□□ -1.25
PDLIM5-221ENST00000542407 ZNF10P21506 573 aaPredicted RBP7.22□□□□□ -1.25
PDLIM5-221ENST00000542407 MST1P26927 711 aa7.22□□□□□ -1.25
PDLIM5-221ENST00000542407 ALDH3B1P43353 468 aa7.22□□□□□ -1.25
PDLIM5-221ENST00000542407 FHITP49789 147 aa7.22□□□□□ -1.25
PDLIM5-221ENST00000542407 ARL6IP1Q15041 203 aa7.22□□□□□ -1.25
PDLIM5-221ENST00000542407 RNF151Q2KHN1 245 aa7.22□□□□□ -1.25
PDLIM5-221ENST00000542407 VWA1Q6PCB0 445 aa7.22□□□□□ -1.25
PDLIM5-221ENST00000542407 PODNL1Q6PEZ8 512 aa7.22□□□□□ -1.25
PDLIM5-221ENST00000542407 APOOLQ6UXV4 268 aa7.22□□□□□ -1.25
PDLIM5-221ENST00000542407 CEACAM19Q7Z692 300 aa7.22□□□□□ -1.25
PDLIM5-221ENST00000542407 SVBPQ8N300 66 aa7.22□□□□□ -1.25
PDLIM5-221ENST00000542407 GNPDA2Q8TDQ7 276 aa7.22□□□□□ -1.25
PDLIM5-221ENST00000542407 SLC25A28Q96A46 364 aa7.22□□□□□ -1.25
PDLIM5-221ENST00000542407 ANKRD9Q96BM1 317 aaPredicted RBP7.22□□□□□ -1.25
PDLIM5-221ENST00000542407 MS4A4EQ96PG1 132 aa7.22□□□□□ -1.25
PDLIM5-221ENST00000542407 C7orf50Q9BRJ6 194 aaKnown RBP7.22□□□□□ -1.25
PDLIM5-221ENST00000542407 ACTRT3Q9BYD9 372 aa7.22□□□□□ -1.25
PDLIM5-221ENST00000542407 NOX3Q9HBY0 568 aa7.22□□□□□ -1.25
PDLIM5-221ENST00000542407 DECR2Q9NUI1 292 aa7.22□□□□□ -1.25
PDLIM5-221ENST00000542407 A4GNTQ9UNA3 340 aa7.22□□□□□ -1.25
PDLIM5-221ENST00000542407 SCN3AQ9NY46 2000 aa7.22□□□□□ -1.25
PDLIM5-221ENST00000542407 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.21□□□□□ -1.25
PDLIM5-221ENST00000542407 TCF21O43680 179 aa7.21□□□□□ -1.25
PDLIM5-221ENST00000542407 HIST1H2ABP04908 130 aa7.21□□□□□ -1.25
PDLIM5-221ENST00000542407 DCNP07585 359 aaKnown RBP7.21□□□□□ -1.25
PDLIM5-221ENST00000542407 IFI6P09912 130 aa7.21□□□□□ -1.25
PDLIM5-221ENST00000542407 ZNF35P13682 527 aa7.21□□□□□ -1.25
PDLIM5-221ENST00000542407 MMP11P24347 488 aa7.21□□□□□ -1.25
PDLIM5-221ENST00000542407 GAS1P54826 345 aa7.21□□□□□ -1.25
PDLIM5-221ENST00000542407 SHC2P98077 582 aa7.21□□□□□ -1.25
PDLIM5-221ENST00000542407 DEFB133Q30KQ1 61 aa7.21□□□□□ -1.25
PDLIM5-221ENST00000542407 HIST3H2AQ7L7L0 130 aa7.21□□□□□ -1.25
PDLIM5-221ENST00000542407 SEMA6DQ8NFY4 1073 aa7.21□□□□□ -1.25
PDLIM5-221ENST00000542407 OR51G2Q8NGK0 314 aa7.21□□□□□ -1.25
PDLIM5-221ENST00000542407 RXFP4Q8TDU9 374 aa7.21□□□□□ -1.25
PDLIM5-221ENST00000542407 CDS1Q92903 461 aa7.21□□□□□ -1.25
PDLIM5-221ENST00000542407 EXTL1Q92935 676 aa7.21□□□□□ -1.25
PDLIM5-221ENST00000542407 HIST1H2ACQ93077 130 aa7.21□□□□□ -1.25
PDLIM5-221ENST00000542407 SLC35A4Q96G79 324 aa7.21□□□□□ -1.25
PDLIM5-221ENST00000542407 GPA33Q99795 319 aa7.21□□□□□ -1.25
PDLIM5-221ENST00000542407 KLHDC3Q9BQ90 382 aa7.21□□□□□ -1.25
PDLIM5-221ENST00000542407 FGF20Q9NP95 211 aaPredicted RBP7.21□□□□□ -1.25
PDLIM5-221ENST00000542407 CHST11Q9NPF2 352 aa7.21□□□□□ -1.25
PDLIM5-221ENST00000542407 PARPBPQ9NWS1 579 aa7.21□□□□□ -1.25
PDLIM5-221ENST00000542407 NAGKQ9UJ70 344 aa7.21□□□□□ -1.25
PDLIM5-221ENST00000542407 LNP1A1A4G5 178 aa7.21□□□□□ -1.26
PDLIM5-221ENST00000542407 ZNF716A6NP11 495 aa7.21□□□□□ -1.26
PDLIM5-221ENST00000542407 CDRT15L2A8MXV6 281 aa7.21□□□□□ -1.26
PDLIM5-221ENST00000542407 MKRN2OSH3BPM6 223 aa7.21□□□□□ -1.26
PDLIM5-221ENST00000542407 FOXS1O43638 330 aa7.21□□□□□ -1.26
PDLIM5-221ENST00000542407 LDB3O75112 727 aa7.21□□□□□ -1.26
PDLIM5-221ENST00000542407 RDH16O75452 317 aa7.21□□□□□ -1.26
PDLIM5-221ENST00000542407 CA11O75493 328 aa7.21□□□□□ -1.26
PDLIM5-221ENST00000542407 UBL3O95164 117 aa7.21□□□□□ -1.26
PDLIM5-221ENST00000542407 CLEC3BP05452 202 aa7.21□□□□□ -1.26
PDLIM5-221ENST00000542407 THBS1P07996 1170 aa7.21□□□□□ -1.26
PDLIM5-221ENST00000542407 ZNF735P0CB33 412 aa7.21□□□□□ -1.26
PDLIM5-221ENST00000542407 NQO2P16083 231 aa7.21□□□□□ -1.26
PDLIM5-221ENST00000542407 AVPR2P30518 371 aa7.21□□□□□ -1.26
PDLIM5-221ENST00000542407 MTNR1BP49286 362 aa7.21□□□□□ -1.26
PDLIM5-221ENST00000542407 CSNK1EP49674 416 aaKnown RBP7.21□□□□□ -1.26
PDLIM5-221ENST00000542407 RAG2P55895 527 aa7.21□□□□□ -1.26
PDLIM5-221ENST00000542407 RAB38P57729 211 aa7.21□□□□□ -1.26
PDLIM5-221ENST00000542407 PITPNAQ00169 270 aa7.21□□□□□ -1.26
PDLIM5-221ENST00000542407 ID2Q02363 134 aa7.21□□□□□ -1.26
PDLIM5-221ENST00000542407 PDZK1IP1Q13113 114 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms