RNA–Protein interactions for RNA: ENST00000542136.1

TNFSF13B-206, Transcript of TNF superfamily member 13b, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13B, Length 495 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13B-206ENST00000542136 IGHV3-13P01766 116 aa11.83□□□□□ -0.52
TNFSF13B-206ENST00000542136 HLA-DQA2P01906 255 aa11.83□□□□□ -0.52
TNFSF13B-206ENST00000542136 CSF3P09919 207 aa11.83□□□□□ -0.52
TNFSF13B-206ENST00000542136 WNT5AP41221 380 aa11.83□□□□□ -0.52
TNFSF13B-206ENST00000542136 KLF3P57682 345 aaPredicted RBP11.83□□□□□ -0.52
TNFSF13B-206ENST00000542136 PTGES3Q15185 160 aaKnown RBP11.83□□□□□ -0.52
TNFSF13B-206ENST00000542136 MEP1BQ16820 701 aa11.83□□□□□ -0.52
TNFSF13B-206ENST00000542136 ZNF718Q3SXZ3 478 aa11.83□□□□□ -0.52
TNFSF13B-206ENST00000542136 LURAP1LQ8IV03 231 aa11.83□□□□□ -0.52
TNFSF13B-206ENST00000542136 ZNF101Q8IZC7 436 aa11.83□□□□□ -0.52
TNFSF13B-206ENST00000542136 SYNPRQ8TBG9 265 aa11.83□□□□□ -0.52
TNFSF13B-206ENST00000542136 NEU4Q8WWR8 484 aaPredicted RBP11.83□□□□□ -0.52
TNFSF13B-206ENST00000542136 PYDC1Q8WXC3 89 aa11.83□□□□□ -0.52
TNFSF13B-206ENST00000542136 MARS2Q96GW9 593 aaKnown RBP11.83□□□□□ -0.52
TNFSF13B-206ENST00000542136 FOXN4Q96NZ1 517 aa11.83□□□□□ -0.52
TNFSF13B-206ENST00000542136 CGGBP1Q9UFW8 167 aaPredicted RBP11.83□□□□□ -0.52
TNFSF13B-206ENST00000542136 ARFGEF3Q5TH69 2177 aa11.83□□□□□ -0.52
TNFSF13B-206ENST00000542136 USF3Q68DE3 2245 aa11.83□□□□□ -0.52
TNFSF13B-206ENST00000542136 PRR23D1E9PI22 279 aaPredicted RBP11.82□□□□□ -0.52
TNFSF13B-206ENST00000542136 M0R233 179 aa11.82□□□□□ -0.52
TNFSF13B-206ENST00000542136 GLCEO94923 617 aa11.82□□□□□ -0.52
TNFSF13B-206ENST00000542136 LCKP06239 509 aa11.82□□□□□ -0.52
TNFSF13B-206ENST00000542136 FAM157BP0CG42 384 aa11.82□□□□□ -0.52
TNFSF13B-206ENST00000542136 PRR23D2P0DMB1 279 aaPredicted RBP11.82□□□□□ -0.52
TNFSF13B-206ENST00000542136 CCNOP22674 350 aa11.82□□□□□ -0.52
TNFSF13B-206ENST00000542136 PYCR1P32322 319 aa11.82□□□□□ -0.52
TNFSF13B-206ENST00000542136 LIPAP38571 399 aa11.82□□□□□ -0.52
TNFSF13B-206ENST00000542136 HTR5AP47898 357 aa11.82□□□□□ -0.52
TNFSF13B-206ENST00000542136 PPP1CBP62140 327 aa11.82□□□□□ -0.52
TNFSF13B-206ENST00000542136 EFNB1P98172 346 aa11.82□□□□□ -0.52
TNFSF13B-206ENST00000542136 PPP2R2BQ00005 443 aa11.82□□□□□ -0.52
TNFSF13B-206ENST00000542136 MSMPQ1L6U9 139 aa11.82□□□□□ -0.52
TNFSF13B-206ENST00000542136 CLEC12BQ2HXU8 276 aa11.82□□□□□ -0.52
TNFSF13B-206ENST00000542136 KRTAP27-1Q3LI81 207 aa11.82□□□□□ -0.52
TNFSF13B-206ENST00000542136 SLC35D3Q5M8T2 416 aa11.82□□□□□ -0.52
TNFSF13B-206ENST00000542136 LINC01590Q5TEZ4 76 aa11.82□□□□□ -0.52
TNFSF13B-206ENST00000542136 COLCA1Q6ZS62 124 aa11.82□□□□□ -0.52
TNFSF13B-206ENST00000542136 IQCF1Q8N6M8 205 aa11.82□□□□□ -0.52
TNFSF13B-206ENST00000542136 OR1J1Q8NGS3 322 aa11.82□□□□□ -0.52
TNFSF13B-206ENST00000542136 PLEKHA8Q96JA3 519 aa11.82□□□□□ -0.52
TNFSF13B-206ENST00000542136 Q96MF0 132 aa11.82□□□□□ -0.52
TNFSF13B-206ENST00000542136 RBM4BQ9BQ04 359 aaKnown RBP11.82□□□□□ -0.52
TNFSF13B-206ENST00000542136 NKIRAS2Q9NYR9 191 aa11.82□□□□□ -0.52
TNFSF13B-206ENST00000542136 GDF2Q9UK05 429 aaPredicted RBP11.82□□□□□ -0.52
TNFSF13B-206ENST00000542136 OAZ3Q9UMX2 235 aa11.82□□□□□ -0.52
TNFSF13B-206ENST00000542136 ZAR1LA6NP61 321 aa11.81□□□□□ -0.52
TNFSF13B-206ENST00000542136 FAM171A2A8MVW0 826 aa11.81□□□□□ -0.52
TNFSF13B-206ENST00000542136 NDUFS8O00217 210 aa11.81□□□□□ -0.52
TNFSF13B-206ENST00000542136 NDUFS7O75251 213 aa11.81□□□□□ -0.52
TNFSF13B-206ENST00000542136 ABHD16AO95870 558 aa11.81□□□□□ -0.52
TNFSF13B-206ENST00000542136 GPANK1O95872 356 aa11.81□□□□□ -0.52
TNFSF13B-206ENST00000542136 MT-ND5P03915 603 aa11.81□□□□□ -0.52
TNFSF13B-206ENST00000542136 GCH1P30793 250 aa11.81□□□□□ -0.52
TNFSF13B-206ENST00000542136 OTX1P32242 354 aaPredicted RBP11.81□□□□□ -0.52
TNFSF13B-206ENST00000542136 ENTPD1P49961 510 aa11.81□□□□□ -0.52
TNFSF13B-206ENST00000542136 NUDT6P53370 316 aa11.81□□□□□ -0.52
TNFSF13B-206ENST00000542136 GABPB1Q06547 395 aaPredicted RBP11.81□□□□□ -0.52
TNFSF13B-206ENST00000542136 RSPO1Q2MKA7 263 aaPredicted RBP11.81□□□□□ -0.52
TNFSF13B-206ENST00000542136 SLX4IPQ5VYV7 408 aa11.81□□□□□ -0.52
TNFSF13B-206ENST00000542136 SHFQ7M4L6 423 aa11.81□□□□□ -0.52
TNFSF13B-206ENST00000542136 OR5L1Q8NGL2 311 aa11.81□□□□□ -0.52
TNFSF13B-206ENST00000542136 OR9Q1Q8NGQ5 310 aa11.81□□□□□ -0.52
TNFSF13B-206ENST00000542136 KLF14Q8TD94 323 aaPredicted RBP11.81□□□□□ -0.52
TNFSF13B-206ENST00000542136 ZNRF4Q8WWF5 429 aa11.81□□□□□ -0.52
TNFSF13B-206ENST00000542136 APOBEC3DQ96AK3 386 aaPredicted RBP11.81□□□□□ -0.52
TNFSF13B-206ENST00000542136 C18orf12Q96KH6 178 aa11.81□□□□□ -0.52
TNFSF13B-206ENST00000542136 PITX2Q99697 317 aa11.81□□□□□ -0.52
TNFSF13B-206ENST00000542136 ATF6BQ99941 703 aa11.81□□□□□ -0.52
TNFSF13B-206ENST00000542136 PKP2Q99959 881 aa11.81□□□□□ -0.52
TNFSF13B-206ENST00000542136 CYSLTR2Q9NS75 346 aa11.81□□□□□ -0.52
TNFSF13B-206ENST00000542136 DDX28Q9NUL7 540 aaKnown RBP11.81□□□□□ -0.52
TNFSF13B-206ENST00000542136 DUSP13Q9UII6 198 aa11.81□□□□□ -0.52
TNFSF13B-206ENST00000542136 TMEFF2Q9UIK5 374 aaPredicted RBP11.81□□□□□ -0.52
TNFSF13B-206ENST00000542136 COMMD3-BMI1R4GMX3 469 aa11.81□□□□□ -0.52
TNFSF13B-206ENST00000542136 CELSR1Q9NYQ6 3014 aa11.81□□□□□ -0.52
TNFSF13B-206ENST00000542136 RTTNQ86VV8 2226 aa11.8□□□□□ -0.52
TNFSF13B-206ENST00000542136 ZNF593O00488 134 aaPredicted RBP11.8□□□□□ -0.52
TNFSF13B-206ENST00000542136 NGFP01138 241 aa11.8□□□□□ -0.52
TNFSF13B-206ENST00000542136 ALPLP05186 524 aa11.8□□□□□ -0.52
TNFSF13B-206ENST00000542136 ADH4P08319 380 aa11.8□□□□□ -0.52
TNFSF13B-206ENST00000542136 ADRA2AP08913 450 aa11.8□□□□□ -0.52
TNFSF13B-206ENST00000542136 IGFBP5P24593 272 aa11.8□□□□□ -0.52
TNFSF13B-206ENST00000542136 GSTT1P30711 240 aa11.8□□□□□ -0.52
TNFSF13B-206ENST00000542136 MRPS11P82912 194 aaKnown RBP11.8□□□□□ -0.52
TNFSF13B-206ENST00000542136 SNAPC1Q16533 368 aa11.8□□□□□ -0.52
TNFSF13B-206ENST00000542136 PCGF3Q3KNV8 242 aa11.8□□□□□ -0.52
TNFSF13B-206ENST00000542136 FAM209AQ5JX71 171 aa11.8□□□□□ -0.52
TNFSF13B-206ENST00000542136 TMEM236Q5W0B7 351 aa11.8□□□□□ -0.52
TNFSF13B-206ENST00000542136 PLBD1Q6P4A8 553 aa11.8□□□□□ -0.52
TNFSF13B-206ENST00000542136 CLEC2AQ6UVW9 174 aa11.8□□□□□ -0.52
TNFSF13B-206ENST00000542136 CFAP77Q6ZQR2 320 aa11.8□□□□□ -0.52
TNFSF13B-206ENST00000542136 LRP11Q86VZ4 500 aa11.8□□□□□ -0.52
TNFSF13B-206ENST00000542136 CPOQ8IVL8 374 aa11.8□□□□□ -0.52
TNFSF13B-206ENST00000542136 ZNF511Q8NB15 262 aa11.8□□□□□ -0.52
TNFSF13B-206ENST00000542136 ABHD4Q8TB40 342 aa11.8□□□□□ -0.52
TNFSF13B-206ENST00000542136 MAP6Q96JE9 813 aa11.8□□□□□ -0.52
TNFSF13B-206ENST00000542136 SORCS2Q96PQ0 1159 aa11.8□□□□□ -0.52
TNFSF13B-206ENST00000542136 INTS14Q96SY0 518 aa11.8□□□□□ -0.52
TNFSF13B-206ENST00000542136 VRK1Q99986 396 aaPredicted RBP11.8□□□□□ -0.52
TNFSF13B-206ENST00000542136 RHNO1Q9BSD3 238 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms