RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 CFAP77Q6ZQR2 320 aa8.33□□□□□ -1.08
YBX3-212ENST00000542002 CCDC121Q6ZUS5 278 aa8.33□□□□□ -1.08
YBX3-212ENST00000542002 NAA40Q86UY6 237 aa8.33□□□□□ -1.08
YBX3-212ENST00000542002 ALDH16A1Q8IZ83 802 aa8.33□□□□□ -1.08
YBX3-212ENST00000542002 ZNF511Q8NB15 262 aa8.33□□□□□ -1.08
YBX3-212ENST00000542002 OR2T33Q8NG76 320 aa8.33□□□□□ -1.08
YBX3-212ENST00000542002 OR10S1Q8NGN2 331 aa8.33□□□□□ -1.08
YBX3-212ENST00000542002 OR1J1Q8NGS3 322 aa8.33□□□□□ -1.08
YBX3-212ENST00000542002 OR1F12Q8NHA8 337 aa8.33□□□□□ -1.08
YBX3-212ENST00000542002 SLC25A40Q8TBP6 338 aa8.33□□□□□ -1.08
YBX3-212ENST00000542002 C10orf105Q8TEF2 133 aa8.33□□□□□ -1.08
YBX3-212ENST00000542002 MAP6Q96JE9 813 aa8.33□□□□□ -1.08
YBX3-212ENST00000542002 WACQ9BTA9 647 aa8.33□□□□□ -1.08
YBX3-212ENST00000542002 OR2J1Q9GZK6 312 aa8.33□□□□□ -1.08
YBX3-212ENST00000542002 YY1AP1Q9H869 796 aa8.33□□□□□ -1.08
YBX3-212ENST00000542002 WDR76Q9H967 626 aa8.33□□□□□ -1.08
YBX3-212ENST00000542002 BARX1Q9HBU1 254 aaPredicted RBP8.33□□□□□ -1.08
YBX3-212ENST00000542002 PNRC2Q9NPJ4 139 aaKnown RBP8.33□□□□□ -1.08
YBX3-212ENST00000542002 TAAR3PQ9P1P4 343 aa8.33□□□□□ -1.08
YBX3-212ENST00000542002 CYB5R1Q9UHQ9 305 aa8.33□□□□□ -1.08
YBX3-212ENST00000542002 STARD10Q9Y365 291 aa8.33□□□□□ -1.08
YBX3-212ENST00000542002 RTTNQ86VV8 2226 aa8.33□□□□□ -1.08
YBX3-212ENST00000542002 MED13LQ71F56 2210 aa8.32□□□□□ -1.08
YBX3-212ENST00000542002 VWC2LB2RUY7 222 aa8.32□□□□□ -1.08
YBX3-212ENST00000542002 H3BN98 237 aa8.32□□□□□ -1.08
YBX3-212ENST00000542002 DOK2O60496 412 aa8.32□□□□□ -1.08
YBX3-212ENST00000542002 IGHV3-13P01766 116 aa8.32□□□□□ -1.08
YBX3-212ENST00000542002 HPXP02790 462 aa8.32□□□□□ -1.08
YBX3-212ENST00000542002 COX5BP10606 129 aa8.32□□□□□ -1.08
YBX3-212ENST00000542002 SPI1P17947 270 aa8.32□□□□□ -1.08
YBX3-212ENST00000542002 COL8A2P25067 703 aa8.32□□□□□ -1.08
YBX3-212ENST00000542002 EPHA2P29317 976 aa8.32□□□□□ -1.08
YBX3-212ENST00000542002 RBMXP38159 391 aaKnown RBP8.32□□□□□ -1.08
YBX3-212ENST00000542002 HTR5AP47898 357 aa8.32□□□□□ -1.08
YBX3-212ENST00000542002 SLC25A1P53007 311 aa8.32□□□□□ -1.08
YBX3-212ENST00000542002 GLO1Q04760 184 aa8.32□□□□□ -1.08
YBX3-212ENST00000542002 SCRN3Q0VDG4 424 aa8.32□□□□□ -1.08
YBX3-212ENST00000542002 HNRNPA0Q13151 305 aaKnown RBP8.32□□□□□ -1.08
YBX3-212ENST00000542002 KPNB1Q14974 876 aaKnown RBP8.32□□□□□ -1.08
YBX3-212ENST00000542002 DMRTA1Q5VZB9 504 aa8.32□□□□□ -1.08
YBX3-212ENST00000542002 TMEM154Q6P9G4 183 aa8.32□□□□□ -1.08
YBX3-212ENST00000542002 DNM1P34Q6PK57 102 aa8.32□□□□□ -1.08
YBX3-212ENST00000542002 ICA1LQ8NDH6 482 aa8.32□□□□□ -1.08
YBX3-212ENST00000542002 GJC3Q8NFK1 279 aa8.32□□□□□ -1.08
YBX3-212ENST00000542002 ABHD4Q8TB40 342 aa8.32□□□□□ -1.08
YBX3-212ENST00000542002 SYNPRQ8TBG9 265 aa8.32□□□□□ -1.08
YBX3-212ENST00000542002 KLF14Q8TD94 323 aaPredicted RBP8.32□□□□□ -1.08
YBX3-212ENST00000542002 PYDC1Q8WXC3 89 aa8.32□□□□□ -1.08
YBX3-212ENST00000542002 NRBF2Q96F24 287 aa8.32□□□□□ -1.08
YBX3-212ENST00000542002 RHNO1Q9BSD3 238 aa8.32□□□□□ -1.08
YBX3-212ENST00000542002 BCL2L14Q9BZR8 327 aa8.32□□□□□ -1.08
YBX3-212ENST00000542002 RAB1BQ9H0U4 201 aa8.32□□□□□ -1.08
YBX3-212ENST00000542002 SEMA6AQ9H2E6 1030 aa8.32□□□□□ -1.08
YBX3-212ENST00000542002 CMC2Q9NRP2 79 aa8.32□□□□□ -1.08
YBX3-212ENST00000542002 PLEK2Q9NYT0 353 aa8.32□□□□□ -1.08
YBX3-212ENST00000542002 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.32□□□□□ -1.08
YBX3-212ENST00000542002 EIF3KQ9UBQ5 218 aaKnown RBP8.32□□□□□ -1.08
YBX3-212ENST00000542002 KLHL21Q9UJP4 597 aa8.32□□□□□ -1.08
YBX3-212ENST00000542002 BAIAP2Q9UQB8 552 aa8.32□□□□□ -1.08
YBX3-212ENST00000542002 GRIP1Q9Y3R0 1128 aa8.32□□□□□ -1.08
YBX3-212ENST00000542002 FLNAP21333 2647 aaKnown RBP8.32□□□□□ -1.08
YBX3-212ENST00000542002 C5orf63A6NC05 138 aa8.31□□□□□ -1.08
YBX3-212ENST00000542002 H3BNX3 289 aa8.31□□□□□ -1.08
YBX3-212ENST00000542002 SURF4O15260 269 aa8.31□□□□□ -1.08
YBX3-212ENST00000542002 DEAF1O75398 565 aaPredicted RBP8.31□□□□□ -1.08
YBX3-212ENST00000542002 NCR1O76036 304 aa8.31□□□□□ -1.08
YBX3-212ENST00000542002 HLA-DQA2P01906 255 aa8.31□□□□□ -1.08
YBX3-212ENST00000542002 ANXA8P13928 327 aa8.31□□□□□ -1.08
YBX3-212ENST00000542002 DAOP14920 347 aa8.31□□□□□ -1.08
YBX3-212ENST00000542002 GRK5P34947 590 aa8.31□□□□□ -1.08
YBX3-212ENST00000542002 MAGEB1P43366 347 aa8.31□□□□□ -1.08
YBX3-212ENST00000542002 MMP15P51511 669 aa8.31□□□□□ -1.08
YBX3-212ENST00000542002 KLF3P57682 345 aaPredicted RBP8.31□□□□□ -1.08
YBX3-212ENST00000542002 ACTR3P61158 418 aa8.31□□□□□ -1.08
YBX3-212ENST00000542002 PPP1CBP62140 327 aa8.31□□□□□ -1.08
YBX3-212ENST00000542002 RPS23P62266 143 aaKnown RBP8.31□□□□□ -1.08
YBX3-212ENST00000542002 PSG7Q13046 419 aa8.31□□□□□ -1.08
YBX3-212ENST00000542002 PCK2Q16822 640 aa8.31□□□□□ -1.08
YBX3-212ENST00000542002 SPRNQ5BIV9 151 aa8.31□□□□□ -1.08
YBX3-212ENST00000542002 ELFN2Q5R3F8 820 aa8.31□□□□□ -1.08
YBX3-212ENST00000542002 MBNL2Q5VZF2 373 aaKnown RBP8.31□□□□□ -1.08
YBX3-212ENST00000542002 SLC27A4Q6P1M0 643 aa8.31□□□□□ -1.08
YBX3-212ENST00000542002 CLEC9AQ6UXN8 241 aa8.31□□□□□ -1.08
YBX3-212ENST00000542002 BIVMQ86UB2 503 aa8.31□□□□□ -1.08
YBX3-212ENST00000542002 ATG16L2Q8NAA4 619 aa8.31□□□□□ -1.08
YBX3-212ENST00000542002 PROKR2Q8NFJ6 384 aa8.31□□□□□ -1.08
YBX3-212ENST00000542002 BBS1Q8NFJ9 593 aa8.31□□□□□ -1.08
YBX3-212ENST00000542002 OR2T4Q8NH00 348 aa8.31□□□□□ -1.08
YBX3-212ENST00000542002 OR5K1Q8NHB7 308 aa8.31□□□□□ -1.08
YBX3-212ENST00000542002 TEX47Q8TBZ9 253 aa8.31□□□□□ -1.08
YBX3-212ENST00000542002 IPCEF1Q8WWN9 437 aaPredicted RBP8.31□□□□□ -1.08
YBX3-212ENST00000542002 FAM168AQ92567 244 aa8.31□□□□□ -1.08
YBX3-212ENST00000542002 CDADC1Q9BWV3 514 aa8.31□□□□□ -1.08
YBX3-212ENST00000542002 DYNLRB1Q9NP97 96 aa8.31□□□□□ -1.08
YBX3-212ENST00000542002 TBCCD1Q9NVR7 557 aa8.31□□□□□ -1.08
YBX3-212ENST00000542002 ZANQ9Y493 2812 aa8.31□□□□□ -1.08
YBX3-212ENST00000542002 ARFGEF3Q5TH69 2177 aa8.31□□□□□ -1.08
YBX3-212ENST00000542002 A0A1W2PPW3 197 aa8.3□□□□□ -1.08
YBX3-212ENST00000542002 G3V2T6 193 aa8.3□□□□□ -1.08
YBX3-212ENST00000542002 M0R233 179 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms