RNA–Protein interactions for RNA: ENST00000541005.1

LTBR-208, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-208ENST00000541005 TUBG2Q9NRH3 451 aa11.23□□□□□ -0.61
LTBR-208ENST00000541005 TBCCD1Q9NVR7 557 aa11.23□□□□□ -0.61
LTBR-208ENST00000541005 SLCO1C1Q9NYB5 712 aa11.23□□□□□ -0.61
LTBR-208ENST00000541005 PLEK2Q9NYT0 353 aa11.23□□□□□ -0.61
LTBR-208ENST00000541005 CYB5R1Q9UHQ9 305 aa11.23□□□□□ -0.61
LTBR-208ENST00000541005 GPR160Q9UJ42 338 aa11.23□□□□□ -0.61
LTBR-208ENST00000541005 KLHL21Q9UJP4 597 aa11.23□□□□□ -0.61
LTBR-208ENST00000541005 FZR1Q9UM11 496 aa11.23□□□□□ -0.61
LTBR-208ENST00000541005 POLR1DQ9Y2S0 133 aa11.23□□□□□ -0.61
LTBR-208ENST00000541005 NF1P21359 2839 aa11.22□□□□□ -0.61
LTBR-208ENST00000541005 A0A1W2PPW3 197 aa11.22□□□□□ -0.61
LTBR-208ENST00000541005 J3QW42 95 aa11.22□□□□□ -0.61
LTBR-208ENST00000541005 RER1O15258 196 aa11.22□□□□□ -0.61
LTBR-208ENST00000541005 DYSFO75923 2080 aa11.22□□□□□ -0.61
LTBR-208ENST00000541005 IFNGP01579 166 aa11.22□□□□□ -0.61
LTBR-208ENST00000541005 ANXA8P13928 327 aa11.22□□□□□ -0.61
LTBR-208ENST00000541005 GIFP27352 417 aa11.22□□□□□ -0.61
LTBR-208ENST00000541005 GRK5P34947 590 aa11.22□□□□□ -0.61
LTBR-208ENST00000541005 ALDH3B1P43353 468 aa11.22□□□□□ -0.61
LTBR-208ENST00000541005 PPP1CBP62140 327 aa11.22□□□□□ -0.61
LTBR-208ENST00000541005 TEKQ02763 1124 aa11.22□□□□□ -0.61
LTBR-208ENST00000541005 LOXL1Q08397 574 aaPredicted RBP11.22□□□□□ -0.61
LTBR-208ENST00000541005 CCNIQ14094 377 aa11.22□□□□□ -0.61
LTBR-208ENST00000541005 CRMP1Q14194 572 aa11.22□□□□□ -0.61
LTBR-208ENST00000541005 MAD2L1BPQ15013 274 aaPredicted RBP11.22□□□□□ -0.61
LTBR-208ENST00000541005 ATP6AP1Q15904 470 aa11.22□□□□□ -0.61
LTBR-208ENST00000541005 ZFHX3Q15911 3703 aa11.22□□□□□ -0.61
LTBR-208ENST00000541005 KRTAP27-1Q3LI81 207 aa11.22□□□□□ -0.61
LTBR-208ENST00000541005 C1orf146Q5VVC0 180 aa11.22□□□□□ -0.61
LTBR-208ENST00000541005 OTPQ5XKR4 325 aa11.22□□□□□ -0.61
LTBR-208ENST00000541005 NIPBLQ6KC79 2804 aaeCLIP11.22□□□□□ -0.61
LTBR-208ENST00000541005 SLC18B1Q6NT16 456 aa11.22□□□□□ -0.61
LTBR-208ENST00000541005 ARL9Q6T311 187 aa11.22□□□□□ -0.61
LTBR-208ENST00000541005 ZCCHC24Q8N2G6 241 aaKnown RBP11.22□□□□□ -0.61
LTBR-208ENST00000541005 CYB561A3Q8NBI2 242 aa11.22□□□□□ -0.61
LTBR-208ENST00000541005 GJC3Q8NFK1 279 aa11.22□□□□□ -0.61
LTBR-208ENST00000541005 ABHD4Q8TB40 342 aa11.22□□□□□ -0.61
LTBR-208ENST00000541005 DCLRE1CQ96SD1 692 aaKnown RBP11.22□□□□□ -0.61
LTBR-208ENST00000541005 COQ7Q99807 217 aa11.22□□□□□ -0.61
LTBR-208ENST00000541005 CMC2Q9NRP2 79 aa11.22□□□□□ -0.61
LTBR-208ENST00000541005 MRPL22Q9NWU5 206 aaKnown RBP11.22□□□□□ -0.61
LTBR-208ENST00000541005 DUSP13Q9UII6 198 aa11.22□□□□□ -0.61
LTBR-208ENST00000541005 RIIAD1A6NNX1 92 aa11.21□□□□□ -0.61
LTBR-208ENST00000541005 TIPRLO75663 272 aa11.21□□□□□ -0.61
LTBR-208ENST00000541005 ABHD16AO95870 558 aa11.21□□□□□ -0.61
LTBR-208ENST00000541005 CLPTM1O96005 669 aa11.21□□□□□ -0.61
LTBR-208ENST00000541005 NGFP01138 241 aa11.21□□□□□ -0.61
LTBR-208ENST00000541005 OSMP13725 252 aa11.21□□□□□ -0.61
LTBR-208ENST00000541005 DAOP14920 347 aa11.21□□□□□ -0.61
LTBR-208ENST00000541005 ZNF3P17036 446 aa11.21□□□□□ -0.61
LTBR-208ENST00000541005 PYCR1P32322 319 aa11.21□□□□□ -0.61
LTBR-208ENST00000541005 CENPAP49450 140 aa11.21□□□□□ -0.61
LTBR-208ENST00000541005 ERFP50548 548 aa11.21□□□□□ -0.61
LTBR-208ENST00000541005 ARHGDIAP52565 204 aa11.21□□□□□ -0.61
LTBR-208ENST00000541005 MRPS11P82912 194 aaKnown RBP11.21□□□□□ -0.61
LTBR-208ENST00000541005 DBPQ10586 325 aaPredicted RBP11.21□□□□□ -0.61
LTBR-208ENST00000541005 MOGQ16653 247 aa11.21□□□□□ -0.61
LTBR-208ENST00000541005 ZNF718Q3SXZ3 478 aa11.21□□□□□ -0.61
LTBR-208ENST00000541005 TMEM255AQ5JRV8 349 aa11.21□□□□□ -0.61
LTBR-208ENST00000541005 ELFN2Q5R3F8 820 aa11.21□□□□□ -0.61
LTBR-208ENST00000541005 SLC27A4Q6P1M0 643 aa11.21□□□□□ -0.61
LTBR-208ENST00000541005 FAHD1Q6P587 224 aa11.21□□□□□ -0.61
LTBR-208ENST00000541005 HS3ST5Q8IZT8 346 aa11.21□□□□□ -0.61
LTBR-208ENST00000541005 ZNF786Q8N393 782 aa11.21□□□□□ -0.61
LTBR-208ENST00000541005 PROKR2Q8NFJ6 384 aa11.21□□□□□ -0.61
LTBR-208ENST00000541005 SLC25A40Q8TBP6 338 aa11.21□□□□□ -0.61
LTBR-208ENST00000541005 KLF14Q8TD94 323 aaPredicted RBP11.21□□□□□ -0.61
LTBR-208ENST00000541005 COG8Q96MW5 612 aa11.21□□□□□ -0.61
LTBR-208ENST00000541005 PIMREGQ9BSJ6 248 aa11.21□□□□□ -0.61
LTBR-208ENST00000541005 OR2J1Q9GZK6 312 aa11.21□□□□□ -0.61
LTBR-208ENST00000541005 TPK1Q9H3S4 243 aa11.21□□□□□ -0.61
LTBR-208ENST00000541005 ZNF556Q9HAH1 456 aa11.21□□□□□ -0.61
LTBR-208ENST00000541005 PNRC2Q9NPJ4 139 aaKnown RBP11.21□□□□□ -0.61
LTBR-208ENST00000541005 NKIRAS2Q9NYR9 191 aa11.21□□□□□ -0.61
LTBR-208ENST00000541005 TAAR3PQ9P1P4 343 aa11.21□□□□□ -0.61
LTBR-208ENST00000541005 CGGBP1Q9UFW8 167 aaPredicted RBP11.21□□□□□ -0.61
LTBR-208ENST00000541005 C17orf100A8MU93 164 aa11.2□□□□□ -0.62
LTBR-208ENST00000541005 H3BN98 237 aa11.2□□□□□ -0.62
LTBR-208ENST00000541005 ADH4P08319 380 aa11.2□□□□□ -0.62
LTBR-208ENST00000541005 NAT2P11245 290 aa11.2□□□□□ -0.62
LTBR-208ENST00000541005 FCGR1AP12314 374 aa11.2□□□□□ -0.62
LTBR-208ENST00000541005 SPI1P17947 270 aa11.2□□□□□ -0.62
LTBR-208ENST00000541005 MPV17P39210 176 aa11.2□□□□□ -0.62
LTBR-208ENST00000541005 NR4A2P43354 598 aa11.2□□□□□ -0.62
LTBR-208ENST00000541005 RGS6P49758 472 aa11.2□□□□□ -0.62
LTBR-208ENST00000541005 ECH1Q13011 328 aa11.2□□□□□ -0.62
LTBR-208ENST00000541005 PCK2Q16822 640 aa11.2□□□□□ -0.62
LTBR-208ENST00000541005 NKPD1Q17RQ9 610 aa11.2□□□□□ -0.62
LTBR-208ENST00000541005 PCGF3Q3KNV8 242 aa11.2□□□□□ -0.62
LTBR-208ENST00000541005 CORO6Q6QEF8 472 aa11.2□□□□□ -0.62
LTBR-208ENST00000541005 CFAP77Q6ZQR2 320 aa11.2□□□□□ -0.62
LTBR-208ENST00000541005 PARP8Q8N3A8 854 aa11.2□□□□□ -0.62
LTBR-208ENST00000541005 IQCF1Q8N6M8 205 aa11.2□□□□□ -0.62
LTBR-208ENST00000541005 ICA1LQ8NDH6 482 aa11.2□□□□□ -0.62
LTBR-208ENST00000541005 ZNF540Q8NDQ6 660 aa11.2□□□□□ -0.62
LTBR-208ENST00000541005 OR9Q1Q8NGQ5 310 aa11.2□□□□□ -0.62
LTBR-208ENST00000541005 UBASH3BQ8TF42 649 aa11.2□□□□□ -0.62
LTBR-208ENST00000541005 SNX33Q8WV41 574 aa11.2□□□□□ -0.62
LTBR-208ENST00000541005 ZNRF4Q8WWF5 429 aa11.2□□□□□ -0.62
LTBR-208ENST00000541005 SLC25A19Q9HC21 320 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms