RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-215	ENST00000540783	TGIF2	Q9GZN2	237 aa		5.1	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	POFUT1	Q9H488	388 aa		5.1	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	APMAP	Q9HDC9	416 aa		5.1	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	SLC22A11	Q9NSA0	550 aa		5.1	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	ZNF337	Q9Y3M9	751 aa		5.1	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	CNOT1	A5YKK6	2376 aa	Known RBP	5.1	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	EYS	Q5T1H1	3165 aa		5.1	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	TRAV8-7	A0A075B6U6	113 aa		5.1	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	GXYLT2	A0PJZ3	443 aa		5.1	□□□□□ -1.59
RAPGEF4-215	ENST00000540783		F8W036	122 aa		5.1	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	LDB3	O75112	727 aa		5.1	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	LYPD3	O95274	346 aa		5.1	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	SYNGR4	O95473	234 aa		5.1	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	APEH	P13798	732 aa	Known RBP	5.1	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	GABRA3	P34903	492 aa		5.1	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	CFHR1	Q03591	330 aa		5.1	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	LTB	Q06643	244 aa		5.1	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	RBMS2	Q15434	407 aa	Known RBP	5.1	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	VWA2	Q5GFL6	755 aa		5.1	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	NUP54	Q7Z3B4	507 aa		5.1	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	OR2W3	Q7Z3T1	314 aa		5.1	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	OR51A4	Q8NGJ6	313 aa		5.1	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	OR6K3	Q8NGY3	331 aa		5.1	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	NANP	Q8TBE9	248 aa		5.1	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	LMF1	Q96S06	567 aa		5.1	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	PDCD10	Q9BUL8	212 aa		5.1	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	FLRT3	Q9NZU0	649 aa		5.1	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	PILRA	Q9UKJ1	303 aa		5.1	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	PCDHB10	Q9UN67	800 aa		5.1	□□□□□ -1.59
RAPGEF4-215	ENST00000540783		A0A1B0GWA3	101 aa		5.1	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	OR6C68	A6NDL8	312 aa		5.1	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	TVP23A	A6NH52	213 aa		5.1	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	LINC00587	B1AMM8	73 aa		5.1	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	ABCD4	O14678	606 aa		5.1	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	IFNG	P01579	166 aa		5.1	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	OR2T7	P0C7T2	308 aa		5.1	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	GIMD1	P0DJR0	217 aa		5.1	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	GP1BB	P13224	206 aa		5.1	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	CNR1	P21554	472 aa		5.1	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	BDKRB2	P30411	391 aa		5.1	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	SLC26A5	P58743	744 aa		5.1	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	IL10RA	Q13651	578 aa		5.1	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	OR7A5	Q15622	319 aa		5.1	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	SCGB2B2	Q4G0G5	96 aa		5.1	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	LINC00696	Q6ZRV3	163 aa		5.1	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	SLC16A13	Q7RTY0	426 aa		5.1	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	FAM219A	Q8IW50	185 aa		5.1	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	OR2T27	Q8NH04	317 aa		5.1	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	PMM1	Q92871	262 aa		5.1	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	NKD1	Q969G9	470 aa		5.1	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	VRK1	Q99986	396 aa	Predicted RBP	5.1	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	VN1R1	Q9GZP7	353 aa		5.1	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	RASL12	Q9NYN1	266 aa		5.1	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	CTSF	Q9UBX1	484 aa		5.1	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	EDAR	Q9UNE0	448 aa		5.1	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	PLEKHA6	Q9Y2H5	1048 aa		5.1	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	ZNF281	Q9Y2X9	895 aa		5.1	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	ZNF318	Q5VUA4	2279 aa		5.09	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	ARPC4-TTLL3	A0A0A6YYG9	625 aa		5.09	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	TMEM72	A0PK05	275 aa		5.09	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	PRR19	A6NJB7	356 aa		5.09	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	DOK2	O60496	412 aa		5.09	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	GLS	O94925	669 aa	Predicted RBP	5.09	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	ANXA2	P07355	339 aa	Known RBP	5.09	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	NR2C1	P13056	603 aa		5.09	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	ABO	P16442	354 aa		5.09	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	PGC	P20142	388 aa		5.09	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	NFYB	P25208	207 aa		5.09	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	MSX1	P28360	303 aa		5.09	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	PEBP1	P30086	187 aa	Known RBP	5.09	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	SLC6A8	P48029	635 aa		5.09	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	HOXA1	P49639	335 aa	Predicted RBP	5.09	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	PLAUR	Q03405	335 aa		5.09	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	SGCB	Q16585	318 aa		5.09	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	HFE	Q30201	348 aa		5.09	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	DCST2	Q5T1A1	773 aa		5.09	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	PRAMEF8	Q5VWM4	474 aa		5.09	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	PRAMEF7	Q5VXH5	474 aa		5.09	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	RAB12	Q6IQ22	244 aa		5.09	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	TMPRSS11F	Q6ZWK6	438 aa		5.09	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	BIVM	Q86UB2	503 aa		5.09	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	LRRTM1	Q86UE6	522 aa		5.09	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	TMEM17	Q86X19	198 aa		5.09	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	SFTPA2	Q8IWL1	248 aa		5.09	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	OR2L13	Q8N349	312 aa		5.09	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	STEAP2	Q8NFT2	490 aa		5.09	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	THAP3	Q8WTV1	239 aa	Predicted RBP	5.09	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	FOXN4	Q96NZ1	517 aa		5.09	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	SLC26A1	Q9H2B4	701 aa		5.09	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	SLC25A32	Q9H2D1	315 aa		5.09	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	BARX1	Q9HBU1	254 aa	Predicted RBP	5.09	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	SRA1	Q9HD15	236 aa	Known RBP	5.09	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	POLE3	Q9NRF9	147 aa		5.09	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	ZNF275	Q9NSD4	429 aa	Predicted RBP	5.09	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	COA4	Q9NYJ1	87 aa		5.09	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	IKZF2	Q9UKS7	526 aa		5.09	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	GTF2A1L	Q9UNN4	478 aa		5.09	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	KLHDC2	Q9Y2U9	406 aa		5.09	□□□□□ -1.59
RAPGEF4-215	ENST00000540783		A0A087WV62	115 aa		5.09	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	KANTR	A0A1W2PQU2	76 aa		5.09	□□□□□ -1.59

Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms