RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 GABRG3Q99928 467 aa8.56□□□□□ -1.04
CTNNA1-243ENST00000540387 SLC12A9Q9BXP2 914 aa8.56□□□□□ -1.04
CTNNA1-243ENST00000540387 SLC25A31Q9H0C2 315 aa8.56□□□□□ -1.04
CTNNA1-243ENST00000540387 ASB8Q9H765 288 aa8.56□□□□□ -1.04
CTNNA1-243ENST00000540387 CBLN4Q9NTU7 201 aa8.56□□□□□ -1.04
CTNNA1-243ENST00000540387 V9GY05 133 aa8.56□□□□□ -1.04
CTNNA1-243ENST00000540387 KIAA1549LQ6ZVL6 1849 aa8.55□□□□□ -1.04
CTNNA1-243ENST00000540387 A0A1W2PQF6 199 aa8.55□□□□□ -1.04
CTNNA1-243ENST00000540387 TSPAN11A1L157 253 aa8.55□□□□□ -1.04
CTNNA1-243ENST00000540387 A8MXE2 369 aa8.55□□□□□ -1.04
CTNNA1-243ENST00000540387 HMGN4O00479 90 aa8.55□□□□□ -1.04
CTNNA1-243ENST00000540387 GAPDHSO14556 408 aaPredicted RBP8.55□□□□□ -1.04
CTNNA1-243ENST00000540387 TP53I11O14683 189 aa8.55□□□□□ -1.04
CTNNA1-243ENST00000540387 ITGB1BP1O14713 200 aa8.55□□□□□ -1.04
CTNNA1-243ENST00000540387 DIRAS3O95661 229 aa8.55□□□□□ -1.04
CTNNA1-243ENST00000540387 BPNT1O95861 308 aa8.55□□□□□ -1.04
CTNNA1-243ENST00000540387 TBX6O95947 436 aaPredicted RBP8.55□□□□□ -1.04
CTNNA1-243ENST00000540387 F13BP05160 661 aa8.55□□□□□ -1.04
CTNNA1-243ENST00000540387 CXCL1P09341 107 aa8.55□□□□□ -1.04
CTNNA1-243ENST00000540387 HOXB2P14652 356 aa8.55□□□□□ -1.04
CTNNA1-243ENST00000540387 COL9A1P20849 921 aa8.55□□□□□ -1.04
CTNNA1-243ENST00000540387 SERPINF1P36955 418 aa8.55□□□□□ -1.04
CTNNA1-243ENST00000540387 TAS2R41P59536 307 aa8.55□□□□□ -1.04
CTNNA1-243ENST00000540387 EGR3Q06889 387 aa8.55□□□□□ -1.04
CTNNA1-243ENST00000540387 CDK5R1Q15078 307 aa8.55□□□□□ -1.04
CTNNA1-243ENST00000540387 OR13C8Q8NGS7 320 aa8.55□□□□□ -1.04
CTNNA1-243ENST00000540387 OR5K2Q8NHB8 316 aa8.55□□□□□ -1.04
CTNNA1-243ENST00000540387 RNASE8Q8TDE3 154 aaKnown RBP8.55□□□□□ -1.04
CTNNA1-243ENST00000540387 CD300LFQ8TDQ1 290 aa8.55□□□□□ -1.04
CTNNA1-243ENST00000540387 CAMK1GQ96NX5 476 aa8.55□□□□□ -1.04
CTNNA1-243ENST00000540387 PDCD1LG2Q9BQ51 273 aa8.55□□□□□ -1.04
CTNNA1-243ENST00000540387 SLC17A9Q9BYT1 436 aa8.55□□□□□ -1.04
CTNNA1-243ENST00000540387 SLC6A16Q9GZN6 736 aa8.55□□□□□ -1.04
CTNNA1-243ENST00000540387 PARD6AQ9NPB6 346 aa8.55□□□□□ -1.04
CTNNA1-243ENST00000540387 PARP11Q9NR21 331 aa8.55□□□□□ -1.04
CTNNA1-243ENST00000540387 CD84Q9UIB8 345 aa8.55□□□□□ -1.04
CTNNA1-243ENST00000540387 AMDHD2Q9Y303 409 aa8.55□□□□□ -1.04
CTNNA1-243ENST00000540387 CHTOPQ9Y3Y2 248 aaKnown RBP8.55□□□□□ -1.04
CTNNA1-243ENST00000540387 TMEM269A0A1B0GVZ9 245 aa8.55□□□□□ -1.04
CTNNA1-243ENST00000540387 PRAMEF27A3QJZ7 478 aa8.55□□□□□ -1.04
CTNNA1-243ENST00000540387 MSGN1A6NI15 193 aa8.55□□□□□ -1.04
CTNNA1-243ENST00000540387 ZNF705GA8MUZ8 300 aaPredicted RBP8.55□□□□□ -1.04
CTNNA1-243ENST00000540387 CDRT15L2A8MXV6 281 aa8.55□□□□□ -1.04
CTNNA1-243ENST00000540387 H0YIV9 168 aa8.55□□□□□ -1.04
CTNNA1-243ENST00000540387 AGR2O95994 175 aa8.55□□□□□ -1.04
CTNNA1-243ENST00000540387 TRGC2P03986 189 aa8.55□□□□□ -1.04
CTNNA1-243ENST00000540387 RPN2P04844 631 aa8.55□□□□□ -1.04
CTNNA1-243ENST00000540387 SOX8P57073 446 aa8.55□□□□□ -1.04
CTNNA1-243ENST00000540387 TAS2R50P59544 299 aa8.55□□□□□ -1.04
CTNNA1-243ENST00000540387 MRPS21P82921 87 aaKnown RBP8.55□□□□□ -1.04
CTNNA1-243ENST00000540387 CST6Q15828 149 aa8.55□□□□□ -1.04
CTNNA1-243ENST00000540387 TMEM95Q3KNT9 176 aa8.55□□□□□ -1.04
CTNNA1-243ENST00000540387 EXOSC6Q5RKV6 272 aaKnown RBP8.55□□□□□ -1.04
CTNNA1-243ENST00000540387 DEGS2Q6QHC5 323 aa8.55□□□□□ -1.04
CTNNA1-243ENST00000540387 UNQ9370/PRO34162Q6UXP9 181 aa8.55□□□□□ -1.04
CTNNA1-243ENST00000540387 TMEM92Q6UXU6 159 aa8.55□□□□□ -1.04
CTNNA1-243ENST00000540387 Q6ZRG5 221 aa8.55□□□□□ -1.04
CTNNA1-243ENST00000540387 Q6ZS52 159 aa8.55□□□□□ -1.04
CTNNA1-243ENST00000540387 COMMD6Q7Z4G1 85 aa8.55□□□□□ -1.04
CTNNA1-243ENST00000540387 LSRQ86X29 649 aaPredicted RBP8.55□□□□□ -1.04
CTNNA1-243ENST00000540387 FAM129CQ86XR2 697 aa8.55□□□□□ -1.04
CTNNA1-243ENST00000540387 SLC35F3Q8IY50 421 aa8.55□□□□□ -1.04
CTNNA1-243ENST00000540387 RFLNBQ8N5W9 214 aa8.55□□□□□ -1.04
CTNNA1-243ENST00000540387 C16orf78Q8WTQ4 265 aa8.55□□□□□ -1.04
CTNNA1-243ENST00000540387 SMPDL3AQ92484 453 aa8.55□□□□□ -1.04
CTNNA1-243ENST00000540387 RNF126Q9BV68 326 aa8.55□□□□□ -1.04
CTNNA1-243ENST00000540387 ACTR3CQ9C0K3 210 aaPredicted RBP8.55□□□□□ -1.04
CTNNA1-243ENST00000540387 OR51V1Q9H2C8 321 aa8.55□□□□□ -1.04
CTNNA1-243ENST00000540387 STARD10Q9Y365 291 aa8.55□□□□□ -1.04
CTNNA1-243ENST00000540387 HS3ST3B1Q9Y662 390 aa8.55□□□□□ -1.04
CTNNA1-243ENST00000540387 TRBV6-7A0A0A0MS04 114 aa8.54□□□□□ -1.04
CTNNA1-243ENST00000540387 TVP23AA6NH52 213 aa8.54□□□□□ -1.04
CTNNA1-243ENST00000540387 C1QTNF3-AMACRE9PGA6 284 aa8.54□□□□□ -1.04
CTNNA1-243ENST00000540387 SAP18O00422 153 aaKnown RBP8.54□□□□□ -1.04
CTNNA1-243ENST00000540387 TCF21O43680 179 aa8.54□□□□□ -1.04
CTNNA1-243ENST00000540387 DCNP07585 359 aaKnown RBP8.54□□□□□ -1.04
CTNNA1-243ENST00000540387 GUSBP08236 651 aa8.54□□□□□ -1.04
CTNNA1-243ENST00000540387 NDUFV2P19404 249 aa8.54□□□□□ -1.04
CTNNA1-243ENST00000540387 DRD3P35462 400 aa8.54□□□□□ -1.04
CTNNA1-243ENST00000540387 SULT1A2P50226 295 aa8.54□□□□□ -1.04
CTNNA1-243ENST00000540387 SGCGQ13326 291 aa8.54□□□□□ -1.04
CTNNA1-243ENST00000540387 HYAL4Q2M3T9 481 aa8.54□□□□□ -1.04
CTNNA1-243ENST00000540387 MOGAT2Q3SYC2 334 aa8.54□□□□□ -1.04
CTNNA1-243ENST00000540387 ZNF311Q5JNZ3 666 aa8.54□□□□□ -1.04
CTNNA1-243ENST00000540387 FBXW9Q5XUX1 488 aa8.54□□□□□ -1.04
CTNNA1-243ENST00000540387 FAM71E1Q6IPT2 247 aa8.54□□□□□ -1.04
CTNNA1-243ENST00000540387 GRHL2Q6ISB3 625 aa8.54□□□□□ -1.04
CTNNA1-243ENST00000540387 ARMC6Q6NXE6 501 aa8.54□□□□□ -1.04
CTNNA1-243ENST00000540387 CLEC1AQ8NC01 280 aa8.54□□□□□ -1.04
CTNNA1-243ENST00000540387 OR10A7Q8NGE5 316 aa8.54□□□□□ -1.04
CTNNA1-243ENST00000540387 OR13C2Q8NGS9 318 aa8.54□□□□□ -1.04
CTNNA1-243ENST00000540387 Q8WTZ3 238 aa8.54□□□□□ -1.04
CTNNA1-243ENST00000540387 FAM122AQ96E09 287 aa8.54□□□□□ -1.04
CTNNA1-243ENST00000540387 ADGRG7Q96K78 797 aa8.54□□□□□ -1.04
CTNNA1-243ENST00000540387 JSRP1Q96MG2 331 aaPredicted RBP8.54□□□□□ -1.04
CTNNA1-243ENST00000540387 SLC25A21Q9BQT8 299 aaPredicted RBP8.54□□□□□ -1.04
CTNNA1-243ENST00000540387 SCRT1Q9BWW7 348 aa8.54□□□□□ -1.04
CTNNA1-243ENST00000540387 GAL3ST2Q9H3Q3 398 aa8.54□□□□□ -1.04
CTNNA1-243ENST00000540387 ADGRL4Q9HBW9 690 aa8.54□□□□□ -1.04
CTNNA1-243ENST00000540387 IL26Q9NPH9 171 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms