RNA–Protein interactions for RNA: ENST00000540021.5

MSH6-210, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 3,930 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-210ENST00000540021 TIMP4Q99727 224 aa11.71□□□□□ -0.53
MSH6-210ENST00000540021 UQCC2Q9BRT2 126 aa11.71□□□□□ -0.53
MSH6-210ENST00000540021 PBX4Q9BYU1 374 aa11.71□□□□□ -0.53
MSH6-210ENST00000540021 NXF5Q9H1B4 397 aaKnown RBP11.71□□□□□ -0.53
MSH6-210ENST00000540021 EHFQ9NZC4 300 aa11.71□□□□□ -0.53
MSH6-210ENST00000540021 KLRF1Q9NZS2 232 aa11.71□□□□□ -0.53
MSH6-210ENST00000540021 DHCR7Q9UBM7 475 aaKnown RBP11.71□□□□□ -0.53
MSH6-210ENST00000540021 CYB5R1Q9UHQ9 305 aa11.71□□□□□ -0.53
MSH6-210ENST00000540021 OR52A1Q9UKL2 312 aa11.71□□□□□ -0.53
MSH6-210ENST00000540021 DOCK9Q9BZ29 2069 aa11.71□□□□□ -0.54
MSH6-210ENST00000540021 CAMLGP49069 296 aa11.71□□□□□ -0.54
MSH6-210ENST00000540021 OR2B8PP59922 312 aa11.71□□□□□ -0.54
MSH6-210ENST00000540021 SNRPEP62304 92 aaKnown RBP11.71□□□□□ -0.54
MSH6-210ENST00000540021 TLE3Q04726 772 aa11.71□□□□□ -0.54
MSH6-210ENST00000540021 FZD5Q13467 585 aa11.71□□□□□ -0.54
MSH6-210ENST00000540021 CCINQ13939 588 aa11.71□□□□□ -0.54
MSH6-210ENST00000540021 SGCAQ16586 387 aa11.71□□□□□ -0.54
MSH6-210ENST00000540021 OR51T1Q8NGJ9 327 aa11.71□□□□□ -0.54
MSH6-210ENST00000540021 MENTQ9BUN1 341 aa11.71□□□□□ -0.54
MSH6-210ENST00000540021 TCEAL2Q9H3H9 227 aaPredicted RBP11.71□□□□□ -0.54
MSH6-210ENST00000540021 MMP25Q9NPA2 562 aa11.71□□□□□ -0.54
MSH6-210ENST00000540021 DZANK1Q9NVP4 752 aa11.71□□□□□ -0.54
MSH6-210ENST00000540021 SERTAD3Q9UJW9 196 aa11.71□□□□□ -0.54
MSH6-210ENST00000540021 GNRH1P01148 92 aa11.7□□□□□ -0.54
MSH6-210ENST00000540021 FGF2P09038 288 aa11.7□□□□□ -0.54
MSH6-210ENST00000540021 PET100P0DJ07 73 aa11.7□□□□□ -0.54
MSH6-210ENST00000540021 RGS19P49795 217 aa11.7□□□□□ -0.54
MSH6-210ENST00000540021 CD226Q15762 336 aa11.7□□□□□ -0.54
MSH6-210ENST00000540021 NKAIN2Q5VXU1 208 aa11.7□□□□□ -0.54
MSH6-210ENST00000540021 ANKRD33Q7Z3H0 272 aa11.7□□□□□ -0.54
MSH6-210ENST00000540021 PUSL1Q8N0Z8 303 aaKnown RBP11.7□□□□□ -0.54
MSH6-210ENST00000540021 NUBPLQ8TB37 319 aa11.7□□□□□ -0.54
MSH6-210ENST00000540021 BAHD1Q8TBE0 780 aaPredicted RBP11.7□□□□□ -0.54
MSH6-210ENST00000540021 TSPAN32Q96QS1 320 aa11.7□□□□□ -0.54
MSH6-210ENST00000540021 ABHD6Q9BV23 337 aa11.7□□□□□ -0.54
MSH6-210ENST00000540021 POLE3Q9NRF9 147 aa11.7□□□□□ -0.54
MSH6-210ENST00000540021 TDRD6O60522 2096 aaKnown RBP11.7□□□□□ -0.54
MSH6-210ENST00000540021 TRAV20A0A0B4J274 112 aa11.7□□□□□ -0.54
MSH6-210ENST00000540021 CCDC163A0A0D9SF12 145 aa11.7□□□□□ -0.54
MSH6-210ENST00000540021 RHPN2P1A8MT19 583 aa11.7□□□□□ -0.54
MSH6-210ENST00000540021 NFYBP25208 207 aa11.7□□□□□ -0.54
MSH6-210ENST00000540021 CD96P40200 585 aa11.7□□□□□ -0.54
MSH6-210ENST00000540021 TMEM244Q5VVB8 128 aa11.7□□□□□ -0.54
MSH6-210ENST00000540021 LYG2Q86SG7 212 aa11.7□□□□□ -0.54
MSH6-210ENST00000540021 LINC00518Q8N0U6 118 aa11.7□□□□□ -0.54
MSH6-210ENST00000540021 TAAR8Q969N4 342 aa11.7□□□□□ -0.54
MSH6-210ENST00000540021 SLC25A28Q96A46 364 aa11.7□□□□□ -0.54
MSH6-210ENST00000540021 SCGB3A2Q96PL1 93 aa11.7□□□□□ -0.54
MSH6-210ENST00000540021 FAM60AQ9NP50 221 aa11.7□□□□□ -0.54
MSH6-210ENST00000540021 IL23AQ9NPF7 189 aa11.7□□□□□ -0.54
MSH6-210ENST00000540021 B3GALT1Q9Y5Z6 326 aa11.7□□□□□ -0.54
MSH6-210ENST00000540021 MDC1Q14676 2089 aaKnown RBP11.7□□□□□ -0.54
MSH6-210ENST00000540021 ARHGEF17Q96PE2 2063 aaPredicted RBP11.7□□□□□ -0.54
MSH6-210ENST00000540021 TMEM218A2RU14 115 aa11.7□□□□□ -0.54
MSH6-210ENST00000540021 OR2M5A3KFT3 312 aa11.7□□□□□ -0.54
MSH6-210ENST00000540021 ADAP1O75689 374 aa11.7□□□□□ -0.54
MSH6-210ENST00000540021 THEGLP0DJG4 465 aa11.7□□□□□ -0.54
MSH6-210ENST00000540021 ALOX5APP20292 161 aa11.7□□□□□ -0.54
MSH6-210ENST00000540021 RAB13P51153 203 aa11.7□□□□□ -0.54
MSH6-210ENST00000540021 PPIAP62937 165 aaKnown RBP11.7□□□□□ -0.54
MSH6-210ENST00000540021 OR5M8Q8NGP6 311 aa11.7□□□□□ -0.54
MSH6-210ENST00000540021 NT5CQ8TCD5 201 aa11.7□□□□□ -0.54
MSH6-210ENST00000540021 FBXO17Q96EF6 278 aa11.7□□□□□ -0.54
MSH6-210ENST00000540021 TOX2Q96NM4 488 aa11.7□□□□□ -0.54
MSH6-210ENST00000540021 TMPRSS13Q9BYE2 586 aa11.7□□□□□ -0.54
MSH6-210ENST00000540021 NDRG3Q9UGV2 375 aa11.7□□□□□ -0.54
MSH6-210ENST00000540021 MED19A0JLT2 244 aaPredicted RBP11.69□□□□□ -0.54
MSH6-210ENST00000540021 PRR32B1ATL7 298 aa11.69□□□□□ -0.54
MSH6-210ENST00000540021 OR2A4O95047 310 aa11.69□□□□□ -0.54
MSH6-210ENST00000540021 CRABP1P29762 137 aa11.69□□□□□ -0.54
MSH6-210ENST00000540021 CLRN1P58418 232 aa11.69□□□□□ -0.54
MSH6-210ENST00000540021 OTOSQ8NHW6 89 aa11.69□□□□□ -0.54
MSH6-210ENST00000540021 ASB17Q8WXJ9 295 aa11.69□□□□□ -0.54
MSH6-210ENST00000540021 SEH1LQ96EE3 360 aa11.69□□□□□ -0.54
MSH6-210ENST00000540021 OR2A7Q96R45 310 aa11.69□□□□□ -0.54
MSH6-210ENST00000540021 IFT22Q9H7X7 185 aa11.69□□□□□ -0.54
MSH6-210ENST00000540021 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.69□□□□□ -0.54
MSH6-210ENST00000540021 METTL12A8MUP2 240 aa11.69□□□□□ -0.54
MSH6-210ENST00000540021 OIP5O43482 229 aa11.69□□□□□ -0.54
MSH6-210ENST00000540021 TNFSF12O43508 249 aa11.69□□□□□ -0.54
MSH6-210ENST00000540021 HCRTR1O43613 425 aa11.69□□□□□ -0.54
MSH6-210ENST00000540021 CTSBP07858 339 aa11.69□□□□□ -0.54
MSH6-210ENST00000540021 FMODQ06828 376 aa11.69□□□□□ -0.54
MSH6-210ENST00000540021 PLEKHN1Q494U1 663 aaPredicted RBP11.69□□□□□ -0.54
MSH6-210ENST00000540021 ZNF658BQ4V348 819 aaPredicted RBP11.69□□□□□ -0.54
MSH6-210ENST00000540021 MESTQ5EB52 335 aa11.69□□□□□ -0.54
MSH6-210ENST00000540021 STPG1Q5TH74 334 aa11.69□□□□□ -0.54
MSH6-210ENST00000540021 CRIPAKQ8N1N5 446 aa11.69□□□□□ -0.54
MSH6-210ENST00000540021 OR13H1Q8NG92 308 aa11.69□□□□□ -0.54
MSH6-210ENST00000540021 OR5D14Q8NGL3 314 aa11.69□□□□□ -0.54
MSH6-210ENST00000540021 NEK7Q8TDX7 302 aa11.69□□□□□ -0.54
MSH6-210ENST00000540021 RAB3CQ96E17 227 aa11.69□□□□□ -0.54
MSH6-210ENST00000540021 GFI1Q99684 422 aa11.69□□□□□ -0.54
MSH6-210ENST00000540021 MED29Q9NX70 200 aa11.69□□□□□ -0.54
MSH6-210ENST00000540021 RASL12Q9NYN1 266 aa11.69□□□□□ -0.54
MSH6-210ENST00000540021 SCN5AQ14524 2016 aa11.69□□□□□ -0.54
MSH6-210ENST00000540021 A8MXK9 166 aa11.69□□□□□ -0.54
MSH6-210ENST00000540021 HPP00738 406 aa11.69□□□□□ -0.54
MSH6-210ENST00000540021 SERPINA2P20848 420 aa11.69□□□□□ -0.54
MSH6-210ENST00000540021 ZNF93P35789 620 aaPredicted RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms