RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 PAMR1Q6UXH9 720 aa14.98□□□□□ -0.01
COPS3-212ENST00000539941 SPATC1Q76KD6 591 aa14.98□□□□□ -0.01
COPS3-212ENST00000539941 TMEM123Q8N131 208 aa14.98□□□□□ -0.01
COPS3-212ENST00000539941 YIPF7Q8N8F6 280 aa14.98□□□□□ -0.01
COPS3-212ENST00000539941 ZIC4Q8N9L1 334 aa14.98□□□□□ -0.01
COPS3-212ENST00000539941 HDHD5Q9BXW7 423 aa14.98□□□□□ -0.01
COPS3-212ENST00000539941 NARFLQ9H6Q4 476 aa14.98□□□□□ -0.01
COPS3-212ENST00000539941 PLSCR3Q9NRY6 295 aa14.98□□□□□ -0.01
COPS3-212ENST00000539941 GLTPQ9NZD2 209 aa14.98□□□□□ -0.01
COPS3-212ENST00000539941 ATPIF1Q9UII2 106 aa14.98□□□□□ -0.01
COPS3-212ENST00000539941 RALYQ9UKM9 306 aaKnown RBP14.98□□□□□ -0.01
COPS3-212ENST00000539941 IKZF2Q9UKS7 526 aa14.98□□□□□ -0.01
COPS3-212ENST00000539941 RAXQ9Y2V3 346 aa14.98□□□□□ -0.01
COPS3-212ENST00000539941 TRBV2A0A0J9YWF9 115 aa14.97□□□□□ -0.01
COPS3-212ENST00000539941 ZNF716A6NP11 495 aa14.97□□□□□ -0.01
COPS3-212ENST00000539941 LEUTXA8MZ59 168 aa14.97□□□□□ -0.01
COPS3-212ENST00000539941 CYTIPO60759 359 aa14.97□□□□□ -0.01
COPS3-212ENST00000539941 UPK3AO75631 287 aa14.97□□□□□ -0.01
COPS3-212ENST00000539941 SC5DO75845 299 aa14.97□□□□□ -0.01
COPS3-212ENST00000539941 ZNF432O94892 652 aa14.97□□□□□ -0.01
COPS3-212ENST00000539941 OR8G3PP0DMU2 310 aa14.97□□□□□ -0.01
COPS3-212ENST00000539941 PSKH1P11801 424 aa14.97□□□□□ -0.01
COPS3-212ENST00000539941 SCN1BQ07699 218 aa14.97□□□□□ -0.01
COPS3-212ENST00000539941 ASAH1Q13510 395 aa14.97□□□□□ -0.01
COPS3-212ENST00000539941 KCNMB1Q16558 191 aa14.97□□□□□ -0.01
COPS3-212ENST00000539941 C10orf128Q5T292 105 aa14.97□□□□□ -0.01
COPS3-212ENST00000539941 LIPNQ5VXI9 398 aa14.97□□□□□ -0.01
COPS3-212ENST00000539941 CARD17Q5XLA6 110 aa14.97□□□□□ -0.01
COPS3-212ENST00000539941 TMEM91Q6ZNR0 172 aa14.97□□□□□ -0.01
COPS3-212ENST00000539941 FCRLAQ7L513 359 aa14.97□□□□□ -0.01
COPS3-212ENST00000539941 NRARPQ7Z6K4 114 aa14.97□□□□□ -0.01
COPS3-212ENST00000539941 ZNF679Q8IYX0 411 aa14.97□□□□□ -0.01
COPS3-212ENST00000539941 RDH10Q8IZV5 341 aa14.97□□□□□ -0.01
COPS3-212ENST00000539941 OR10H5Q8NGA6 315 aa14.97□□□□□ -0.01
COPS3-212ENST00000539941 ABHD4Q8TB40 342 aa14.97□□□□□ -0.01
COPS3-212ENST00000539941 NSMAFQ92636 917 aa14.97□□□□□ -0.01
COPS3-212ENST00000539941 GHSRQ92847 366 aa14.97□□□□□ -0.01
COPS3-212ENST00000539941 FOXN4Q96NZ1 517 aa14.97□□□□□ -0.01
COPS3-212ENST00000539941 ZNF385AQ96PM9 386 aaKnown RBP14.97□□□□□ -0.01
COPS3-212ENST00000539941 TBC1D24Q9ULP9 559 aa14.97□□□□□ -0.01
COPS3-212ENST00000539941 SSUH2Q9Y2M2 353 aa14.97□□□□□ -0.01
COPS3-212ENST00000539941 FLVCR1Q9Y5Y0 555 aa14.97□□□□□ -0.01
COPS3-212ENST00000539941 ITPR1Q14643 2758 aa14.97□□□□□ -0.01
COPS3-212ENST00000539941 PDGFAP04085 211 aa14.97□□□□□ -0.01
COPS3-212ENST00000539941 QDPRP09417 244 aa14.97□□□□□ -0.01
COPS3-212ENST00000539941 RPS19P39019 145 aaKnown RBP14.97□□□□□ -0.01
COPS3-212ENST00000539941 RORCP51449 518 aa14.97□□□□□ -0.01
COPS3-212ENST00000539941 EIF2B1Q14232 305 aaKnown RBP14.97□□□□□ -0.01
COPS3-212ENST00000539941 MEP1BQ16820 701 aa14.97□□□□□ -0.01
COPS3-212ENST00000539941 FDX2Q6P4F2 183 aa14.97□□□□□ -0.01
COPS3-212ENST00000539941 IGFL3Q6UXB1 125 aa14.97□□□□□ -0.01
COPS3-212ENST00000539941 OR8H2Q8N162 312 aa14.97□□□□□ -0.01
COPS3-212ENST00000539941 OR6N1Q8NGY5 312 aa14.97□□□□□ -0.01
COPS3-212ENST00000539941 OR52N5Q8NH56 324 aa14.97□□□□□ -0.01
COPS3-212ENST00000539941 NEIL3Q8TAT5 605 aa14.97□□□□□ -0.01
COPS3-212ENST00000539941 DEDD2Q8WXF8 326 aa14.97□□□□□ -0.01
COPS3-212ENST00000539941 C11orf40Q8WZ69 217 aa14.97□□□□□ -0.01
COPS3-212ENST00000539941 ABHD6Q9BV23 337 aa14.97□□□□□ -0.01
COPS3-212ENST00000539941 ING3Q9NXR8 418 aa14.97□□□□□ -0.01
COPS3-212ENST00000539941 SLCO1C1Q9NYB5 712 aa14.97□□□□□ -0.01
COPS3-212ENST00000539941 A0A0X1KG70 313 aa14.96□□□□□ -0.01
COPS3-212ENST00000539941 CD8B2A6NJW9 211 aa14.96□□□□□ -0.01
COPS3-212ENST00000539941 ZNF254O75437 659 aa14.96□□□□□ -0.01
COPS3-212ENST00000539941 CDRT1O95170 752 aa14.96□□□□□ -0.01
COPS3-212ENST00000539941 MPZL1O95297 269 aa14.96□□□□□ -0.01
COPS3-212ENST00000539941 SYNGR4O95473 234 aa14.96□□□□□ -0.01
COPS3-212ENST00000539941 CD8BP10966 210 aa14.96□□□□□ -0.01
COPS3-212ENST00000539941 PSMB10P40306 273 aa14.96□□□□□ -0.01
COPS3-212ENST00000539941 RPS27P42677 84 aaKnown RBP14.96□□□□□ -0.01
COPS3-212ENST00000539941 ALKBH1Q13686 389 aaKnown RBP14.96□□□□□ -0.01
COPS3-212ENST00000539941 TOR2AQ5JU69 321 aa14.96□□□□□ -0.01
COPS3-212ENST00000539941 LRFN4Q6PJG9 635 aa14.96□□□□□ -0.01
COPS3-212ENST00000539941 DEGS2Q6QHC5 323 aa14.96□□□□□ -0.01
COPS3-212ENST00000539941 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.96□□□□□ -0.01
COPS3-212ENST00000539941 C20orf196Q8IYI0 205 aa14.96□□□□□ -0.01
COPS3-212ENST00000539941 TEX19Q8NA77 164 aa14.96□□□□□ -0.01
COPS3-212ENST00000539941 PHYHIPQ92561 330 aa14.96□□□□□ -0.01
COPS3-212ENST00000539941 RNF166Q96A37 237 aaPredicted RBP14.96□□□□□ -0.01
COPS3-212ENST00000539941 SLC25A46Q96AG3 418 aa14.96□□□□□ -0.01
COPS3-212ENST00000539941 WDFY2Q96P53 400 aa14.96□□□□□ -0.01
COPS3-212ENST00000539941 DCLRE1CQ96SD1 692 aaKnown RBP14.96□□□□□ -0.01
COPS3-212ENST00000539941 FOXD3Q9UJU5 478 aaPredicted RBP14.96□□□□□ -0.01
COPS3-212ENST00000539941 BOLA1Q9Y3E2 137 aa14.96□□□□□ -0.01
COPS3-212ENST00000539941 PCDHGA9Q9Y5G4 932 aaKnown RBP14.96□□□□□ -0.01
COPS3-212ENST00000539941 ZFYVE26Q68DK2 2539 aa14.95□□□□□ -0.02
COPS3-212ENST00000539941 IGKV3D-15A0A087WSY6 115 aa14.95□□□□□ -0.02
COPS3-212ENST00000539941 TRGV5A0A0B4J1U4 118 aa14.95□□□□□ -0.02
COPS3-212ENST00000539941 A0A1W2PPL8 197 aa14.95□□□□□ -0.02
COPS3-212ENST00000539941 PSMD9O00233 223 aa14.95□□□□□ -0.02
COPS3-212ENST00000539941 GATBO75879 557 aaKnown RBP14.95□□□□□ -0.02
COPS3-212ENST00000539941 HOXB1P14653 301 aaPredicted RBP14.95□□□□□ -0.02
COPS3-212ENST00000539941 RASGEF1BQ0VAM2 473 aa14.95□□□□□ -0.02
COPS3-212ENST00000539941 FOXL2NBQ6ZUU3 175 aa14.95□□□□□ -0.02
COPS3-212ENST00000539941 ZADH2Q8N4Q0 377 aa14.95□□□□□ -0.02
COPS3-212ENST00000539941 RNF128Q8TEB7 428 aa14.95□□□□□ -0.02
COPS3-212ENST00000539941 ROBO4Q8WZ75 1007 aa14.95□□□□□ -0.02
COPS3-212ENST00000539941 TMEM45BQ96B21 275 aa14.95□□□□□ -0.02
COPS3-212ENST00000539941 ZNF845Q96IR2 970 aaPredicted RBP14.95□□□□□ -0.02
COPS3-212ENST00000539941 AMELYQ99218 206 aa14.95□□□□□ -0.02
COPS3-212ENST00000539941 LDAHQ9H6V9 325 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms