RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 SLC6A7Q99884 636 aa11.89□□□□□ -0.51
UBE3B-209ENST00000539584 TCEAL2Q9H3H9 227 aaPredicted RBP11.89□□□□□ -0.51
UBE3B-209ENST00000539584 NDRG3Q9UGV2 375 aa11.89□□□□□ -0.51
UBE3B-209ENST00000539584 GDF2Q9UK05 429 aaPredicted RBP11.89□□□□□ -0.51
UBE3B-209ENST00000539584 OR52A1Q9UKL2 312 aa11.89□□□□□ -0.51
UBE3B-209ENST00000539584 KLK13Q9UKR3 277 aa11.89□□□□□ -0.51
UBE3B-209ENST00000539584 TRBV6-7A0A0A0MS04 114 aa11.89□□□□□ -0.51
UBE3B-209ENST00000539584 LILRA5A6NI73 299 aa11.89□□□□□ -0.51
UBE3B-209ENST00000539584 PLPP3O14495 311 aa11.89□□□□□ -0.51
UBE3B-209ENST00000539584 ICOSLGO75144 302 aa11.89□□□□□ -0.51
UBE3B-209ENST00000539584 ALOX12BO75342 701 aa11.89□□□□□ -0.51
UBE3B-209ENST00000539584 GPANK1O95872 356 aa11.89□□□□□ -0.51
UBE3B-209ENST00000539584 CTLA4P16410 223 aa11.89□□□□□ -0.51
UBE3B-209ENST00000539584 CX3CR1P49238 355 aa11.89□□□□□ -0.51
UBE3B-209ENST00000539584 MMP16P51512 607 aa11.89□□□□□ -0.51
UBE3B-209ENST00000539584 MFGE8Q08431 387 aaPredicted RBP11.89□□□□□ -0.51
UBE3B-209ENST00000539584 ZP4Q12836 540 aa11.89□□□□□ -0.51
UBE3B-209ENST00000539584 SRSF5Q13243 272 aaKnown RBP11.89□□□□□ -0.51
UBE3B-209ENST00000539584 MELKQ14680 651 aa11.89□□□□□ -0.51
UBE3B-209ENST00000539584 ELAVL1Q15717 326 aaKnown RBP11.89□□□□□ -0.51
UBE3B-209ENST00000539584 C1orf140Q5VVS0 124 aa11.89□□□□□ -0.51
UBE3B-209ENST00000539584 PGAP1Q75T13 922 aa11.89□□□□□ -0.51
UBE3B-209ENST00000539584 ZNF761Q86XN6 746 aaPredicted RBP11.89□□□□□ -0.51
UBE3B-209ENST00000539584 ARMC10Q8N2F6 343 aa11.89□□□□□ -0.51
UBE3B-209ENST00000539584 BPIFCQ8NFQ6 507 aa11.89□□□□□ -0.51
UBE3B-209ENST00000539584 ELP5Q8TE02 316 aa11.89□□□□□ -0.51
UBE3B-209ENST00000539584 ELF4Q99607 663 aaPredicted RBP11.89□□□□□ -0.51
UBE3B-209ENST00000539584 MAP3K3Q99759 626 aa11.89□□□□□ -0.51
UBE3B-209ENST00000539584 TBL1XR1Q9BZK7 514 aa11.89□□□□□ -0.51
UBE3B-209ENST00000539584 LANCL2Q9NS86 450 aa11.89□□□□□ -0.51
UBE3B-209ENST00000539584 ZNF230Q9UIE0 474 aaPredicted RBP11.89□□□□□ -0.51
UBE3B-209ENST00000539584 FARSAQ9Y285 508 aaKnown RBP11.89□□□□□ -0.51
UBE3B-209ENST00000539584 ZNF175Q9Y473 711 aa11.89□□□□□ -0.51
UBE3B-209ENST00000539584 DOCK8Q8NF50 2099 aa11.89□□□□□ -0.51
UBE3B-209ENST00000539584 ARHGEF17Q96PE2 2063 aaPredicted RBP11.89□□□□□ -0.51
UBE3B-209ENST00000539584 LOC107986453A0A1B0GWG9 222 aa11.88□□□□□ -0.51
UBE3B-209ENST00000539584 DCDC2BA2VCK2 349 aa11.88□□□□□ -0.51
UBE3B-209ENST00000539584 F8VVB4 439 aa11.88□□□□□ -0.51
UBE3B-209ENST00000539584 F8VWA3 439 aa11.88□□□□□ -0.51
UBE3B-209ENST00000539584 RAB27BO00194 218 aa11.88□□□□□ -0.51
UBE3B-209ENST00000539584 FGF16O43320 207 aa11.88□□□□□ -0.51
UBE3B-209ENST00000539584 TSPAN2O60636 221 aa11.88□□□□□ -0.51
UBE3B-209ENST00000539584 AHSA1O95433 338 aa11.88□□□□□ -0.51
UBE3B-209ENST00000539584 ICAM2P13598 275 aa11.88□□□□□ -0.51
UBE3B-209ENST00000539584 BDKRB2P30411 391 aa11.88□□□□□ -0.51
UBE3B-209ENST00000539584 CASRP41180 1078 aa11.88□□□□□ -0.51
UBE3B-209ENST00000539584 FNTBP49356 437 aa11.88□□□□□ -0.51
UBE3B-209ENST00000539584 SLC26A5P58743 744 aa11.88□□□□□ -0.51
UBE3B-209ENST00000539584 FZD2Q14332 565 aa11.88□□□□□ -0.51
UBE3B-209ENST00000539584 KCNAB1Q14722 419 aa11.88□□□□□ -0.51
UBE3B-209ENST00000539584 CDNFQ49AH0 187 aa11.88□□□□□ -0.51
UBE3B-209ENST00000539584 HLA-DQA1Q5Y7H0 255 aa11.88□□□□□ -0.51
UBE3B-209ENST00000539584 MISPQ8IVT2 679 aa11.88□□□□□ -0.51
UBE3B-209ENST00000539584 TMEM185AQ8NFB2 350 aa11.88□□□□□ -0.51
UBE3B-209ENST00000539584 ZNF721Q8TF20 911 aa11.88□□□□□ -0.51
UBE3B-209ENST00000539584 NMES1Q9C002 83 aa11.88□□□□□ -0.51
UBE3B-209ENST00000539584 KCNK15Q9H427 330 aa11.88□□□□□ -0.51
UBE3B-209ENST00000539584 PDE7BQ9NP56 450 aa11.88□□□□□ -0.51
UBE3B-209ENST00000539584 G6PC2Q9NQR9 355 aa11.88□□□□□ -0.51
UBE3B-209ENST00000539584 PNO1Q9NRX1 252 aaKnown RBP11.88□□□□□ -0.51
UBE3B-209ENST00000539584 VSIG4Q9Y279 399 aa11.88□□□□□ -0.51
UBE3B-209ENST00000539584 KLF2Q9Y5W3 355 aaPredicted RBP11.88□□□□□ -0.51
UBE3B-209ENST00000539584 IGKV3D-11A0A0A0MRZ8 115 aa11.87□□□□□ -0.51
UBE3B-209ENST00000539584 TMED7-TICAM2A0A0A6YYA0 188 aa11.87□□□□□ -0.51
UBE3B-209ENST00000539584 TMEM218A2RU14 115 aa11.87□□□□□ -0.51
UBE3B-209ENST00000539584 OR6C76A6NM76 312 aa11.87□□□□□ -0.51
UBE3B-209ENST00000539584 F5H0A9 414 aaPredicted RBP11.87□□□□□ -0.51
UBE3B-209ENST00000539584 STK17BO94768 372 aa11.87□□□□□ -0.51
UBE3B-209ENST00000539584 ERCC1P07992 297 aaPredicted RBP11.87□□□□□ -0.51
UBE3B-209ENST00000539584 CHRM2P08172 466 aa11.87□□□□□ -0.51
UBE3B-209ENST00000539584 TPT1P13693 172 aaKnown RBP11.87□□□□□ -0.51
UBE3B-209ENST00000539584 DAP3P51398 398 aaKnown RBP11.87□□□□□ -0.51
UBE3B-209ENST00000539584 GPR85P60893 370 aa11.87□□□□□ -0.51
UBE3B-209ENST00000539584 ACTBL2Q562R1 376 aa11.87□□□□□ -0.51
UBE3B-209ENST00000539584 KIAA0895LQ68EN5 471 aa11.87□□□□□ -0.51
UBE3B-209ENST00000539584 ELP2Q6IA86 826 aa11.87□□□□□ -0.51
UBE3B-209ENST00000539584 C3orf33Q6P1S2 294 aa11.87□□□□□ -0.51
UBE3B-209ENST00000539584 ATRAIDQ6UW56 229 aa11.87□□□□□ -0.51
UBE3B-209ENST00000539584 ZNF813Q6ZN06 617 aa11.87□□□□□ -0.51
UBE3B-209ENST00000539584 C17orf107Q6ZR85 190 aa11.87□□□□□ -0.51
UBE3B-209ENST00000539584 SLC22A24Q8N4F4 322 aa11.87□□□□□ -0.51
UBE3B-209ENST00000539584 DAZLQ92904 295 aaKnown RBP11.87□□□□□ -0.51
UBE3B-209ENST00000539584 ZNF524Q96C55 264 aa11.87□□□□□ -0.51
UBE3B-209ENST00000539584 SLC25A36Q96CQ1 311 aa11.87□□□□□ -0.51
UBE3B-209ENST00000539584 FAM117AQ9C073 453 aa11.87□□□□□ -0.51
UBE3B-209ENST00000539584 OR8D2Q9GZM6 311 aa11.87□□□□□ -0.51
UBE3B-209ENST00000539584 CGGBP1Q9UFW8 167 aaPredicted RBP11.87□□□□□ -0.51
UBE3B-209ENST00000539584 TMED7Q9Y3B3 224 aa11.87□□□□□ -0.51
UBE3B-209ENST00000539584 EMC9Q9Y3B6 208 aa11.87□□□□□ -0.51
UBE3B-209ENST00000539584 RHBDD3Q9Y3P4 386 aa11.87□□□□□ -0.51
UBE3B-209ENST00000539584 A0A0B4J2A0 478 aa11.87□□□□□ -0.51
UBE3B-209ENST00000539584 TEX13DA0A0J9YY54 714 aaPredicted RBP11.87□□□□□ -0.51
UBE3B-209ENST00000539584 TMEM235A6NFC5 223 aa11.87□□□□□ -0.51
UBE3B-209ENST00000539584 DBX1A6NMT0 343 aa11.87□□□□□ -0.51
UBE3B-209ENST00000539584 OR2AT4A6NND4 320 aa11.87□□□□□ -0.51
UBE3B-209ENST00000539584 H3BSH0 61 aa11.87□□□□□ -0.51
UBE3B-209ENST00000539584 H7C2Y5 167 aa11.87□□□□□ -0.51
UBE3B-209ENST00000539584 SULT2B1O00204 365 aa11.87□□□□□ -0.51
UBE3B-209ENST00000539584 NUDT14O95848 222 aa11.87□□□□□ -0.51
UBE3B-209ENST00000539584 IGLV3-19P01714 112 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms