RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 IP6K3Q96PC2 410 aa15.25■□□□□ 0.03
PCDHB17P-201ENST00000539533 ZNF436Q9C0F3 470 aaPredicted RBP15.25■□□□□ 0.03
PCDHB17P-201ENST00000539533 CCDC86Q9H6F5 360 aaKnown RBP15.25■□□□□ 0.03
PCDHB17P-201ENST00000539533 ZNF275Q9NSD4 429 aaPredicted RBP15.25■□□□□ 0.03
PCDHB17P-201ENST00000539533 ALKBH4Q9NXW9 302 aa15.25■□□□□ 0.03
PCDHB17P-201ENST00000539533 NKIRAS2Q9NYR9 191 aa15.25■□□□□ 0.03
PCDHB17P-201ENST00000539533 SPATA2Q9UM82 520 aa15.25■□□□□ 0.03
PCDHB17P-201ENST00000539533 FREM3P0C091 2139 aa15.25■□□□□ 0.03
PCDHB17P-201ENST00000539533 OR2M5A3KFT3 312 aa15.24■□□□□ 0.03
PCDHB17P-201ENST00000539533 PRSS37A4D1T9 235 aa15.24■□□□□ 0.03
PCDHB17P-201ENST00000539533 G3V3Q6 166 aa15.24■□□□□ 0.03
PCDHB17P-201ENST00000539533 CTDSPLO15194 276 aa15.24■□□□□ 0.03
PCDHB17P-201ENST00000539533 PEX14O75381 377 aa15.24■□□□□ 0.03
PCDHB17P-201ENST00000539533 ARL6IP5O75915 188 aa15.24■□□□□ 0.03
PCDHB17P-201ENST00000539533 GPANK1O95872 356 aa15.24■□□□□ 0.03
PCDHB17P-201ENST00000539533 RFPL3SP0C7P2 107 aa15.24■□□□□ 0.03
PCDHB17P-201ENST00000539533 IFNGR1P15260 489 aa15.24■□□□□ 0.03
PCDHB17P-201ENST00000539533 GDI2P50395 445 aaKnown RBP15.24■□□□□ 0.03
PCDHB17P-201ENST00000539533 LINC00696Q6ZRV3 163 aa15.24■□□□□ 0.03
PCDHB17P-201ENST00000539533 SIGLEC12Q96PQ1 595 aa15.24■□□□□ 0.03
PCDHB17P-201ENST00000539533 RYDENQ9NUL5 291 aaKnown RBP15.24■□□□□ 0.03
PCDHB17P-201ENST00000539533 DLL3Q9NYJ7 618 aa15.24■□□□□ 0.03
PCDHB17P-201ENST00000539533 PLA2G3Q9NZ20 509 aa15.24■□□□□ 0.03
PCDHB17P-201ENST00000539533 COPS3Q9UNS2 423 aa15.24■□□□□ 0.03
PCDHB17P-201ENST00000539533 FAM186AA6NE01 2351 aa15.24■□□□□ 0.03
PCDHB17P-201ENST00000539533 PINLYPA6NC86 204 aa15.24■□□□□ 0.03
PCDHB17P-201ENST00000539533 H3BUI4 141 aa15.24■□□□□ 0.03
PCDHB17P-201ENST00000539533 OGG1O15527 345 aa15.24■□□□□ 0.03
PCDHB17P-201ENST00000539533 NEURL1O76050 574 aa15.24■□□□□ 0.03
PCDHB17P-201ENST00000539533 IGHMP01871 453 aa15.24■□□□□ 0.03
PCDHB17P-201ENST00000539533 OR2T7P0C7T2 308 aa15.24■□□□□ 0.03
PCDHB17P-201ENST00000539533 SELENOPP49908 381 aa15.24■□□□□ 0.03
PCDHB17P-201ENST00000539533 POU3F1Q03052 451 aaPredicted RBP15.24■□□□□ 0.03
PCDHB17P-201ENST00000539533 NLRC3Q7RTR2 1065 aa15.24■□□□□ 0.03
PCDHB17P-201ENST00000539533 TMPRSS7Q7RTY8 843 aa15.24■□□□□ 0.03
PCDHB17P-201ENST00000539533 CLEC1AQ8NC01 280 aa15.24■□□□□ 0.03
PCDHB17P-201ENST00000539533 OR2T4Q8NH00 348 aa15.24■□□□□ 0.03
PCDHB17P-201ENST00000539533 OR2T27Q8NH04 317 aa15.24■□□□□ 0.03
PCDHB17P-201ENST00000539533 ZNF671Q8TAW3 534 aa15.24■□□□□ 0.03
PCDHB17P-201ENST00000539533 LGALS14Q8TCE9 139 aa15.24■□□□□ 0.03
PCDHB17P-201ENST00000539533 SMIM19Q96E16 107 aa15.24■□□□□ 0.03
PCDHB17P-201ENST00000539533 METTL17Q9H7H0 456 aaPredicted RBP15.24■□□□□ 0.03
PCDHB17P-201ENST00000539533 EMC3Q9P0I2 261 aa15.24■□□□□ 0.03
PCDHB17P-201ENST00000539533 B3GALT5Q9Y2C3 310 aa15.24■□□□□ 0.03
PCDHB17P-201ENST00000539533 AK6Q9Y3D8 172 aaKnown RBP15.24■□□□□ 0.03
PCDHB17P-201ENST00000539533 TVP23AA6NH52 213 aa15.23■□□□□ 0.03
PCDHB17P-201ENST00000539533 ZNF814B7Z6K7 855 aa15.23■□□□□ 0.03
PCDHB17P-201ENST00000539533 TOR1AO14656 332 aa15.23■□□□□ 0.03
PCDHB17P-201ENST00000539533 MTRF1O75570 445 aaKnown RBP15.23■□□□□ 0.03
PCDHB17P-201ENST00000539533 TOXO94900 526 aa15.23■□□□□ 0.03
PCDHB17P-201ENST00000539533 UCHL1P09936 223 aa15.23■□□□□ 0.03
PCDHB17P-201ENST00000539533 KLK2P20151 261 aa15.23■□□□□ 0.03
PCDHB17P-201ENST00000539533 GBX2P52951 348 aaPredicted RBP15.23■□□□□ 0.03
PCDHB17P-201ENST00000539533 CDK5R1Q15078 307 aa15.23■□□□□ 0.03
PCDHB17P-201ENST00000539533 EEF1A1P5Q5VTE0 462 aa15.23■□□□□ 0.03
PCDHB17P-201ENST00000539533 SLC25A43Q8WUT9 341 aaPredicted RBP15.23■□□□□ 0.03
PCDHB17P-201ENST00000539533 FER1L6-AS2Q96M78 137 aa15.23■□□□□ 0.03
PCDHB17P-201ENST00000539533 FOXN4Q96NZ1 517 aa15.23■□□□□ 0.03
PCDHB17P-201ENST00000539533 MED29Q9NX70 200 aa15.23■□□□□ 0.03
PCDHB17P-201ENST00000539533 MOKQ9UQ07 419 aa15.23■□□□□ 0.03
PCDHB17P-201ENST00000539533 MAB21L2Q9Y586 359 aa15.23■□□□□ 0.03
PCDHB17P-201ENST00000539533 PCDHGA9Q9Y5G4 932 aaKnown RBP15.23■□□□□ 0.03
PCDHB17P-201ENST00000539533 NCKAP5O14513 1909 aa15.23■□□□□ 0.03
PCDHB17P-201ENST00000539533 A0A1W2PPL8 197 aa15.22■□□□□ 0.03
PCDHB17P-201ENST00000539533 LRRC3CA6NJW4 275 aa15.22■□□□□ 0.03
PCDHB17P-201ENST00000539533 UBE2NLQ5JXB2 153 aa15.22■□□□□ 0.03
PCDHB17P-201ENST00000539533 OTPQ5XKR4 325 aa15.22■□□□□ 0.03
PCDHB17P-201ENST00000539533 SFRP4Q6FHJ7 346 aaPredicted RBP15.22■□□□□ 0.03
PCDHB17P-201ENST00000539533 YRDCQ86U90 279 aaKnown RBP15.22■□□□□ 0.03
PCDHB17P-201ENST00000539533 FTMTQ8N4E7 242 aa15.22■□□□□ 0.03
PCDHB17P-201ENST00000539533 PELI1Q96FA3 418 aa15.22■□□□□ 0.03
PCDHB17P-201ENST00000539533 C1QTNF6Q9BXI9 259 aa15.22■□□□□ 0.03
PCDHB17P-201ENST00000539533 MFRPQ9BY79 579 aa15.22■□□□□ 0.03
PCDHB17P-201ENST00000539533 GSX2Q9BZM3 304 aa15.22■□□□□ 0.03
PCDHB17P-201ENST00000539533 MRPL15Q9P015 296 aaKnown RBP15.22■□□□□ 0.03
PCDHB17P-201ENST00000539533 B3GAT1Q9P2W7 334 aa15.22■□□□□ 0.03
PCDHB17P-201ENST00000539533 FLVCR2Q9UPI3 526 aa15.22■□□□□ 0.03
PCDHB17P-201ENST00000539533 LOC400499M0QZD8 3231 aa15.22■□□□□ 0.03
PCDHB17P-201ENST00000539533 PTPRZ1P23471 2315 aaPredicted RBP15.22■□□□□ 0.03
PCDHB17P-201ENST00000539533 ARGFXA6NJG6 315 aa15.22■□□□□ 0.03
PCDHB17P-201ENST00000539533 GMDSO60547 372 aa15.22■□□□□ 0.03
PCDHB17P-201ENST00000539533 WDPCPO95876 746 aa15.22■□□□□ 0.03
PCDHB17P-201ENST00000539533 LIPCP11150 499 aa15.22■□□□□ 0.03
PCDHB17P-201ENST00000539533 P2RY4P51582 365 aa15.22■□□□□ 0.03
PCDHB17P-201ENST00000539533 RPS11P62280 158 aaKnown RBP eCLIP15.22■□□□□ 0.03
PCDHB17P-201ENST00000539533 CTAG1AP78358 180 aa15.22■□□□□ 0.03
PCDHB17P-201ENST00000539533 HSF1Q00613 529 aa15.22■□□□□ 0.03
PCDHB17P-201ENST00000539533 ETFDHQ16134 617 aa15.22■□□□□ 0.03
PCDHB17P-201ENST00000539533 SEZ6L2Q6UXD5 910 aa15.22■□□□□ 0.03
PCDHB17P-201ENST00000539533 SLC35D2Q76EJ3 337 aa15.22■□□□□ 0.03
PCDHB17P-201ENST00000539533 CMTM4Q8IZR5 234 aa15.22■□□□□ 0.03
PCDHB17P-201ENST00000539533 ASB10Q8WXI3 467 aa15.22■□□□□ 0.03
PCDHB17P-201ENST00000539533 KLHL15Q96M94 604 aa15.22■□□□□ 0.03
PCDHB17P-201ENST00000539533 LINC00052Q96N35 136 aa15.22■□□□□ 0.03
PCDHB17P-201ENST00000539533 OR14A2Q96R54 314 aa15.22■□□□□ 0.03
PCDHB17P-201ENST00000539533 UTP23Q9BRU9 249 aaKnown RBP15.22■□□□□ 0.03
PCDHB17P-201ENST00000539533 HES7Q9BYE0 225 aa15.22■□□□□ 0.03
PCDHB17P-201ENST00000539533 B9D1Q9UPM9 204 aa15.22■□□□□ 0.03
PCDHB17P-201ENST00000539533 RCE1Q9Y256 329 aa15.22■□□□□ 0.03
PCDHB17P-201ENST00000539533 HDGFL3Q9Y3E1 203 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms