RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 ATAD2BQ9ULI0 1458 aa1.79□□□□□ -2.12
CCDC7-209ENST00000539197 SEC16AO15027 2179 aa1.78□□□□□ -2.12
CCDC7-209ENST00000539197 GLYATL1P3A0A0U1RQE8 302 aa1.78□□□□□ -2.12
CCDC7-209ENST00000539197 SOCS1O15524 211 aa1.78□□□□□ -2.12
CCDC7-209ENST00000539197 RDH16O75452 317 aa1.78□□□□□ -2.12
CCDC7-209ENST00000539197 SURF6O75683 361 aaKnown RBP1.78□□□□□ -2.12
CCDC7-209ENST00000539197 SLC22A5O76082 557 aa1.78□□□□□ -2.12
CCDC7-209ENST00000539197 P0C880 135 aa1.78□□□□□ -2.12
CCDC7-209ENST00000539197 PABPC4LP0CB38 370 aaKnown RBP1.78□□□□□ -2.12
CCDC7-209ENST00000539197 ME2P23368 584 aa1.78□□□□□ -2.12
CCDC7-209ENST00000539197 TAGLN2P37802 199 aaKnown RBP1.78□□□□□ -2.12
CCDC7-209ENST00000539197 CRYBB2P43320 205 aa1.78□□□□□ -2.12
CCDC7-209ENST00000539197 CDKN2DP55273 166 aa1.78□□□□□ -2.12
CCDC7-209ENST00000539197 TAS2R31P59538 309 aa1.78□□□□□ -2.12
CCDC7-209ENST00000539197 PRKCDQ05655 676 aa1.78□□□□□ -2.12
CCDC7-209ENST00000539197 FUT5Q11128 374 aa1.78□□□□□ -2.12
CCDC7-209ENST00000539197 GK3PQ14409 553 aa1.78□□□□□ -2.12
CCDC7-209ENST00000539197 CEP55Q53EZ4 464 aa1.78□□□□□ -2.12
CCDC7-209ENST00000539197 CTSL3PQ5NE16 218 aa1.78□□□□□ -2.12
CCDC7-209ENST00000539197 AVPI1Q5T686 147 aa1.78□□□□□ -2.12
CCDC7-209ENST00000539197 RUFY3Q7L099 469 aa1.78□□□□□ -2.12
CCDC7-209ENST00000539197 EGFL6Q8IUX8 553 aa1.78□□□□□ -2.12
CCDC7-209ENST00000539197 PLPPR1Q8TBJ4 325 aa1.78□□□□□ -2.12
CCDC7-209ENST00000539197 SLC7A13Q8TCU3 470 aa1.78□□□□□ -2.12
CCDC7-209ENST00000539197 CWH43Q9H720 699 aa1.78□□□□□ -2.12
CCDC7-209ENST00000539197 EXOSC4Q9NPD3 245 aaKnown RBP1.78□□□□□ -2.12
CCDC7-209ENST00000539197 EXTL2Q9UBQ6 330 aa1.78□□□□□ -2.12
CCDC7-209ENST00000539197 SUN2Q9UH99 717 aa1.78□□□□□ -2.12
CCDC7-209ENST00000539197 ZNF391Q9UJN7 358 aa1.78□□□□□ -2.12
CCDC7-209ENST00000539197 RABL2BQ9UNT1 228 aa1.78□□□□□ -2.12
CCDC7-209ENST00000539197 ASB3Q9Y575 518 aa1.78□□□□□ -2.12
CCDC7-209ENST00000539197 A0A1W2PPE3 182 aa1.77□□□□□ -2.13
CCDC7-209ENST00000539197 C16orf90A8MZG2 172 aa1.77□□□□□ -2.13
CCDC7-209ENST00000539197 L7N2F9 121 aa1.77□□□□□ -2.13
CCDC7-209ENST00000539197 DNASE2O00115 360 aaPredicted RBP1.77□□□□□ -2.13
CCDC7-209ENST00000539197 MRPS12O15235 138 aaKnown RBP1.77□□□□□ -2.13
CCDC7-209ENST00000539197 REM1O75628 298 aa1.77□□□□□ -2.13
CCDC7-209ENST00000539197 CD99P14209 185 aa1.77□□□□□ -2.13
CCDC7-209ENST00000539197 ZNF250P15622 560 aa1.77□□□□□ -2.13
CCDC7-209ENST00000539197 MX1P20591 662 aa1.77□□□□□ -2.13
CCDC7-209ENST00000539197 GDI2P50395 445 aaKnown RBP1.77□□□□□ -2.13
CCDC7-209ENST00000539197 TPMTP51580 245 aa1.77□□□□□ -2.13
CCDC7-209ENST00000539197 CCNA1P78396 465 aa1.77□□□□□ -2.13
CCDC7-209ENST00000539197 ADARB1P78563 741 aaKnown RBP1.77□□□□□ -2.13
CCDC7-209ENST00000539197 CDK5Q00535 292 aa1.77□□□□□ -2.13
CCDC7-209ENST00000539197 MS4A15Q8N5U1 240 aa1.77□□□□□ -2.13
CCDC7-209ENST00000539197 EIF1ADQ8N9N8 165 aaKnown RBP1.77□□□□□ -2.13
CCDC7-209ENST00000539197 SPATA4Q8NEY3 305 aa1.77□□□□□ -2.13
CCDC7-209ENST00000539197 TTLQ8NG68 377 aa1.77□□□□□ -2.13
CCDC7-209ENST00000539197 OR2A1Q8NGT9 310 aa1.77□□□□□ -2.13
CCDC7-209ENST00000539197 GPR151Q8TDV0 419 aa1.77□□□□□ -2.13
CCDC7-209ENST00000539197 LRRC29Q8WV35 223 aa1.77□□□□□ -2.13
CCDC7-209ENST00000539197 CCDC126Q96EE4 140 aa1.77□□□□□ -2.13
CCDC7-209ENST00000539197 TVP23CQ96ET8 276 aa1.77□□□□□ -2.13
CCDC7-209ENST00000539197 COL21A1Q96P44 957 aa1.77□□□□□ -2.13
CCDC7-209ENST00000539197 MICU1Q9BPX6 476 aa1.77□□□□□ -2.13
CCDC7-209ENST00000539197 LZTS2Q9BRK4 669 aa1.77□□□□□ -2.13
CCDC7-209ENST00000539197 LSM7Q9UK45 103 aaKnown RBP1.77□□□□□ -2.13
CCDC7-209ENST00000539197 RRP15Q9Y3B9 282 aaKnown RBP1.77□□□□□ -2.13
CCDC7-209ENST00000539197 SYNJ2BP-COX16A0A087WUM0 186 aa1.76□□□□□ -2.13
CCDC7-209ENST00000539197 FAM240BA0A1B0GVZ2 78 aa1.76□□□□□ -2.13
CCDC7-209ENST00000539197 TMEM120BA0PK00 339 aa1.76□□□□□ -2.13
CCDC7-209ENST00000539197 TRIM64CA6NLI5 447 aa1.76□□□□□ -2.13
CCDC7-209ENST00000539197 BTNL10A8MVZ5 291 aa1.76□□□□□ -2.13
CCDC7-209ENST00000539197 CHMP2AO43633 222 aa1.76□□□□□ -2.13
CCDC7-209ENST00000539197 TNNI1P19237 187 aa1.76□□□□□ -2.13
CCDC7-209ENST00000539197 PBLDP30039 288 aaPredicted RBP1.76□□□□□ -2.13
CCDC7-209ENST00000539197 CSNK1EP49674 416 aaKnown RBP1.76□□□□□ -2.13
CCDC7-209ENST00000539197 CCNHP51946 323 aaPredicted RBP1.76□□□□□ -2.13
CCDC7-209ENST00000539197 CCNG1P51959 295 aa1.76□□□□□ -2.13
CCDC7-209ENST00000539197 PPP1CBP62140 327 aa1.76□□□□□ -2.13
CCDC7-209ENST00000539197 RPS11P62280 158 aaKnown RBP eCLIP1.76□□□□□ -2.13
CCDC7-209ENST00000539197 HMGN5P82970 282 aaKnown RBP1.76□□□□□ -2.13
CCDC7-209ENST00000539197 ZMYND11Q15326 602 aa1.76□□□□□ -2.13
CCDC7-209ENST00000539197 NBPF5PQ86XG9 351 aaPredicted RBP1.76□□□□□ -2.13
CCDC7-209ENST00000539197 C1orf64Q8NEQ6 169 aa1.76□□□□□ -2.13
CCDC7-209ENST00000539197 OR5M1Q8NGP8 315 aa1.76□□□□□ -2.13
CCDC7-209ENST00000539197 OR6N1Q8NGY5 312 aa1.76□□□□□ -2.13
CCDC7-209ENST00000539197 N4BP2L2Q92802 583 aaPredicted RBP1.76□□□□□ -2.13
CCDC7-209ENST00000539197 DCPSQ96C86 337 aaKnown RBP1.76□□□□□ -2.13
CCDC7-209ENST00000539197 DNAJC1Q96KC8 554 aaKnown RBP1.76□□□□□ -2.13
CCDC7-209ENST00000539197 GCOM2Q9BZD3 368 aaPredicted RBP1.76□□□□□ -2.13
CCDC7-209ENST00000539197 FGF23Q9GZV9 251 aaPredicted RBP1.76□□□□□ -2.13
CCDC7-209ENST00000539197 LRRC40Q9H9A6 602 aa1.76□□□□□ -2.13
CCDC7-209ENST00000539197 EDA2RQ9HAV5 297 aa1.76□□□□□ -2.13
CCDC7-209ENST00000539197 DHCR7Q9UBM7 475 aaKnown RBP1.76□□□□□ -2.13
CCDC7-209ENST00000539197 HPCAL4Q9UM19 191 aa1.76□□□□□ -2.13
CCDC7-209ENST00000539197 LTBP4Q8N2S1 1624 aa1.76□□□□□ -2.13
CCDC7-209ENST00000539197 TENM1Q9UKZ4 2725 aa1.75□□□□□ -2.13
CCDC7-209ENST00000539197 IGHV3OR16-8A0A075B7F1 116 aa1.75□□□□□ -2.13
CCDC7-209ENST00000539197 C5orf63A6NC05 138 aa1.75□□□□□ -2.13
CCDC7-209ENST00000539197 VGLL3A8MV65 326 aa1.75□□□□□ -2.13
CCDC7-209ENST00000539197 EIF1BO60739 113 aaKnown RBP1.75□□□□□ -2.13
CCDC7-209ENST00000539197 SEMA3DO95025 777 aa1.75□□□□□ -2.13
CCDC7-209ENST00000539197 SNX4O95219 450 aa1.75□□□□□ -2.13
CCDC7-209ENST00000539197 SERPINA3P01011 423 aa1.75□□□□□ -2.13
CCDC7-209ENST00000539197 GLAP06280 429 aa1.75□□□□□ -2.13
CCDC7-209ENST00000539197 ERGP11308 486 aa1.75□□□□□ -2.13
CCDC7-209ENST00000539197 FOXN2P32314 431 aa1.75□□□□□ -2.13
CCDC7-209ENST00000539197 EIF1P41567 113 aaKnown RBP1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms