RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 TRBV2A0A0J9YWF9 115 aa9.35□□□□□ -0.91
TNFRSF1A-211ENST00000538363 F5H5K5 113 aa9.35□□□□□ -0.91
TNFRSF1A-211ENST00000538363 RER1O15258 196 aa9.35□□□□□ -0.91
TNFRSF1A-211ENST00000538363 SULT1C4O75897 302 aa9.35□□□□□ -0.91
TNFRSF1A-211ENST00000538363 HLA-HP01893 362 aa9.35□□□□□ -0.91
TNFRSF1A-211ENST00000538363 SCG5P05408 212 aa9.35□□□□□ -0.91
TNFRSF1A-211ENST00000538363 ANXA2P07355 339 aaKnown RBP9.35□□□□□ -0.91
TNFRSF1A-211ENST00000538363 PATE4P0C8F1 98 aa9.35□□□□□ -0.91
TNFRSF1A-211ENST00000538363 ZNF32P17041 273 aa9.35□□□□□ -0.91
TNFRSF1A-211ENST00000538363 JUNBP17275 347 aaPredicted RBP9.35□□□□□ -0.91
TNFRSF1A-211ENST00000538363 GNLYP22749 145 aa9.35□□□□□ -0.91
TNFRSF1A-211ENST00000538363 APLNRP35414 380 aa9.35□□□□□ -0.91
TNFRSF1A-211ENST00000538363 HTR5AP47898 357 aa9.35□□□□□ -0.91
TNFRSF1A-211ENST00000538363 PRKXP51817 358 aa9.35□□□□□ -0.91
TNFRSF1A-211ENST00000538363 TPTEP56180 551 aa9.35□□□□□ -0.91
TNFRSF1A-211ENST00000538363 RAB1AP62820 205 aa9.35□□□□□ -0.91
TNFRSF1A-211ENST00000538363 TUBA1BP68363 451 aa9.35□□□□□ -0.91
TNFRSF1A-211ENST00000538363 SLC3A1Q07837 685 aa9.35□□□□□ -0.91
TNFRSF1A-211ENST00000538363 ENDOGQ14249 297 aaKnown RBP9.35□□□□□ -0.91
TNFRSF1A-211ENST00000538363 IRF3Q14653 427 aa9.35□□□□□ -0.91
TNFRSF1A-211ENST00000538363 RAB35Q15286 201 aa9.35□□□□□ -0.91
TNFRSF1A-211ENST00000538363 TSC22D1Q15714 1073 aa9.35□□□□□ -0.91
TNFRSF1A-211ENST00000538363 GSG1Q2KHT4 349 aa9.35□□□□□ -0.91
TNFRSF1A-211ENST00000538363 TBRG1Q3YBR2 411 aa9.35□□□□□ -0.91
TNFRSF1A-211ENST00000538363 HIKESHIQ53FT3 197 aa9.35□□□□□ -0.91
TNFRSF1A-211ENST00000538363 ELFN2Q5R3F8 820 aa9.35□□□□□ -0.91
TNFRSF1A-211ENST00000538363 SFRP5Q5T4F7 317 aa9.35□□□□□ -0.91
TNFRSF1A-211ENST00000538363 UBE2UQ5VVX9 321 aa9.35□□□□□ -0.91
TNFRSF1A-211ENST00000538363 ARL9Q6T311 187 aa9.35□□□□□ -0.91
TNFRSF1A-211ENST00000538363 FOXL2NBQ6ZUU3 175 aa9.35□□□□□ -0.91
TNFRSF1A-211ENST00000538363 NCCRP1Q6ZVX7 275 aaPredicted RBP9.35□□□□□ -0.91
TNFRSF1A-211ENST00000538363 TUBA1AQ71U36 451 aa9.35□□□□□ -0.91
TNFRSF1A-211ENST00000538363 SSX6Q7RTT6 188 aa9.35□□□□□ -0.91
TNFRSF1A-211ENST00000538363 MRGPRGQ86SM5 289 aa9.35□□□□□ -0.91
TNFRSF1A-211ENST00000538363 SYT9Q86SS6 491 aa9.35□□□□□ -0.91
TNFRSF1A-211ENST00000538363 COMMD2Q86X83 199 aa9.35□□□□□ -0.91
TNFRSF1A-211ENST00000538363 SYS1Q8N2H4 156 aa9.35□□□□□ -0.91
TNFRSF1A-211ENST00000538363 ZNF433Q8N7K0 673 aaPredicted RBP9.35□□□□□ -0.91
TNFRSF1A-211ENST00000538363 ZNF676Q8N7Q3 588 aa9.35□□□□□ -0.91
TNFRSF1A-211ENST00000538363 NAXEQ8NCW5 288 aa9.35□□□□□ -0.91
TNFRSF1A-211ENST00000538363 STEAP2Q8NFT2 490 aa9.35□□□□□ -0.91
TNFRSF1A-211ENST00000538363 AKR7LQ8NHP1 331 aa9.35□□□□□ -0.91
TNFRSF1A-211ENST00000538363 PGAM5Q96HS1 289 aa9.35□□□□□ -0.91
TNFRSF1A-211ENST00000538363 COG8Q96MW5 612 aa9.35□□□□□ -0.91
TNFRSF1A-211ENST00000538363 OR5M11Q96RB7 305 aa9.35□□□□□ -0.91
TNFRSF1A-211ENST00000538363 ATF6BQ99941 703 aa9.35□□□□□ -0.91
TNFRSF1A-211ENST00000538363 COMMD4Q9H0A8 199 aa9.35□□□□□ -0.91
TNFRSF1A-211ENST00000538363 NIPAL2Q9H841 368 aa9.35□□□□□ -0.91
TNFRSF1A-211ENST00000538363 SP140LQ9H930 580 aa9.35□□□□□ -0.91
TNFRSF1A-211ENST00000538363 ISG20L2Q9H9L3 353 aaKnown RBP9.35□□□□□ -0.91
TNFRSF1A-211ENST00000538363 EXOSC4Q9NPD3 245 aaKnown RBP9.35□□□□□ -0.91
TNFRSF1A-211ENST00000538363 ELOVL5Q9NYP7 299 aa9.35□□□□□ -0.91
TNFRSF1A-211ENST00000538363 NDUFA13Q9P0J0 144 aa9.35□□□□□ -0.91
TNFRSF1A-211ENST00000538363 LHFPL6Q9Y693 200 aa9.35□□□□□ -0.91
TNFRSF1A-211ENST00000538363 TMEM269A0A1B0GVZ9 245 aa9.34□□□□□ -0.91
TNFRSF1A-211ENST00000538363 TRIM64A6NGJ6 449 aa9.34□□□□□ -0.91
TNFRSF1A-211ENST00000538363 FAM90A27PA6NNH2 459 aa9.34□□□□□ -0.91
TNFRSF1A-211ENST00000538363 LOC110117498-PIK3R3F6TDL0 507 aa9.34□□□□□ -0.91
TNFRSF1A-211ENST00000538363 J3QRE1 110 aa9.34□□□□□ -0.91
TNFRSF1A-211ENST00000538363 CCRL2O00421 344 aa9.34□□□□□ -0.91
TNFRSF1A-211ENST00000538363 TBX1O43435 398 aa9.34□□□□□ -0.91
TNFRSF1A-211ENST00000538363 ITGA5P08648 1049 aa9.34□□□□□ -0.91
TNFRSF1A-211ENST00000538363 CELP19835 753 aa9.34□□□□□ -0.91
TNFRSF1A-211ENST00000538363 CHRNB4P30926 498 aa9.34□□□□□ -0.91
TNFRSF1A-211ENST00000538363 GDI2P50395 445 aaKnown RBP9.34□□□□□ -0.91
TNFRSF1A-211ENST00000538363 MMP16P51512 607 aa9.34□□□□□ -0.91
TNFRSF1A-211ENST00000538363 FOXG1P55316 489 aaPredicted RBP9.34□□□□□ -0.91
TNFRSF1A-211ENST00000538363 MLLT11Q13015 90 aaPredicted RBP9.34□□□□□ -0.91
TNFRSF1A-211ENST00000538363 RAB39AQ14964 217 aa9.34□□□□□ -0.91
TNFRSF1A-211ENST00000538363 GUSBP1Q15486 140 aa9.34□□□□□ -0.91
TNFRSF1A-211ENST00000538363 CDONQ4KMG0 1287 aa9.34□□□□□ -0.91
TNFRSF1A-211ENST00000538363 PABPC1L2AQ5JQF8 200 aa9.34□□□□□ -0.91
TNFRSF1A-211ENST00000538363 BCL2L15Q5TBC7 163 aa9.34□□□□□ -0.91
TNFRSF1A-211ENST00000538363 ZNF774Q6NX45 483 aa9.34□□□□□ -0.91
TNFRSF1A-211ENST00000538363 RPL22L1Q6P5R6 122 aaKnown RBP9.34□□□□□ -0.91
TNFRSF1A-211ENST00000538363 DEGS2Q6QHC5 323 aa9.34□□□□□ -0.91
TNFRSF1A-211ENST00000538363 CFAP77Q6ZQR2 320 aa9.34□□□□□ -0.91
TNFRSF1A-211ENST00000538363 LIAT1Q6ZQX7 453 aa9.34□□□□□ -0.91
TNFRSF1A-211ENST00000538363 SATL1Q86VE3 508 aa9.34□□□□□ -0.91
TNFRSF1A-211ENST00000538363 CLVS1Q8IUQ0 354 aaPredicted RBP9.34□□□□□ -0.91
TNFRSF1A-211ENST00000538363 EGFL6Q8IUX8 553 aa9.34□□□□□ -0.91
TNFRSF1A-211ENST00000538363 ZFP41Q8N8Y5 198 aa9.34□□□□□ -0.91
TNFRSF1A-211ENST00000538363 C1orf162Q8NEQ5 155 aaPredicted RBP9.34□□□□□ -0.91
TNFRSF1A-211ENST00000538363 OR1J2Q8NGS2 313 aa9.34□□□□□ -0.91
TNFRSF1A-211ENST00000538363 OR1F12Q8NHA8 337 aa9.34□□□□□ -0.91
TNFRSF1A-211ENST00000538363 BCL2L2Q92843 193 aaPredicted RBP9.34□□□□□ -0.91
TNFRSF1A-211ENST00000538363 MUL1Q969V5 352 aa9.34□□□□□ -0.91
TNFRSF1A-211ENST00000538363 NABP1Q96AH0 204 aa9.34□□□□□ -0.91
TNFRSF1A-211ENST00000538363 FBXO17Q96EF6 278 aa9.34□□□□□ -0.91
TNFRSF1A-211ENST00000538363 KCNS3Q9BQ31 491 aa9.34□□□□□ -0.91
TNFRSF1A-211ENST00000538363 C1QTNF6Q9BXI9 259 aa9.34□□□□□ -0.91
TNFRSF1A-211ENST00000538363 OR2H1Q9GZK4 316 aa9.34□□□□□ -0.91
TNFRSF1A-211ENST00000538363 HDHD2Q9H0R4 259 aa9.34□□□□□ -0.91
TNFRSF1A-211ENST00000538363 CDH20Q9HBT6 801 aa9.34□□□□□ -0.91
TNFRSF1A-211ENST00000538363 ISYNA1Q9NPH2 558 aa9.34□□□□□ -0.91
TNFRSF1A-211ENST00000538363 KCNJ16Q9NPI9 418 aa9.34□□□□□ -0.91
TNFRSF1A-211ENST00000538363 EIF3KQ9UBQ5 218 aaKnown RBP9.34□□□□□ -0.91
TNFRSF1A-211ENST00000538363 FBXL3Q9UKT7 428 aa9.34□□□□□ -0.91
TNFRSF1A-211ENST00000538363 KLHDC2Q9Y2U9 406 aa9.34□□□□□ -0.91
TNFRSF1A-211ENST00000538363 AMDHD2Q9Y303 409 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms