RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 SYT14P1Q58G82 188 aa15.32■□□□□ 0.04
SCARB1-205ENST00000538291 GFRALQ6UXV0 394 aa15.32■□□□□ 0.04
SCARB1-205ENST00000538291 OR13F1Q8NGS4 319 aa15.32■□□□□ 0.04
SCARB1-205ENST00000538291 ZCCHC4Q9H5U6 513 aa15.32■□□□□ 0.04
SCARB1-205ENST00000538291 MYH9P35579 1960 aaKnown RBP15.31■□□□□ 0.04
SCARB1-205ENST00000538291 TMEM129A0AVI4 362 aa15.31■□□□□ 0.04
SCARB1-205ENST00000538291 CBR3O75828 277 aa15.31■□□□□ 0.04
SCARB1-205ENST00000538291 CEACAM5P06731 702 aa15.31■□□□□ 0.04
SCARB1-205ENST00000538291 HIST1H1CP16403 213 aaKnown RBP15.31■□□□□ 0.04
SCARB1-205ENST00000538291 CTSFQ9UBX1 484 aa15.31■□□□□ 0.04
SCARB1-205ENST00000538291 RGPD5Q99666 1765 aa15.31■□□□□ 0.04
SCARB1-205ENST00000538291 LILRA5A6NI73 299 aa15.31■□□□□ 0.04
SCARB1-205ENST00000538291 FAM157BP0CG42 384 aa15.31■□□□□ 0.04
SCARB1-205ENST00000538291 CPEP16870 476 aa15.31■□□□□ 0.04
SCARB1-205ENST00000538291 SOHLH1Q5JUK2 328 aa15.31■□□□□ 0.04
SCARB1-205ENST00000538291 ZNF620Q6ZNG0 422 aa15.31■□□□□ 0.04
SCARB1-205ENST00000538291 CLEC1BQ9P126 229 aa15.31■□□□□ 0.04
SCARB1-205ENST00000538291 MYO18AQ92614 2054 aaKnown RBP15.31■□□□□ 0.04
SCARB1-205ENST00000538291 FITM1A5D6W6 292 aa15.31■□□□□ 0.04
SCARB1-205ENST00000538291 NRASP01111 189 aa15.31■□□□□ 0.04
SCARB1-205ENST00000538291 CLEC2LP0C7M8 214 aa15.31■□□□□ 0.04
SCARB1-205ENST00000538291 RPL18Q07020 188 aaKnown RBP15.31■□□□□ 0.04
SCARB1-205ENST00000538291 SNTB1Q13884 538 aaKnown RBP15.31■□□□□ 0.04
SCARB1-205ENST00000538291 AGBL4Q5VU57 503 aa15.31■□□□□ 0.04
SCARB1-205ENST00000538291 CORO6Q6QEF8 472 aa15.31■□□□□ 0.04
SCARB1-205ENST00000538291 SLCO4A1Q96BD0 722 aa15.31■□□□□ 0.04
SCARB1-205ENST00000538291 PCED1AQ9H1Q7 454 aa15.31■□□□□ 0.04
SCARB1-205ENST00000538291 ACER3Q9NUN7 267 aa15.31■□□□□ 0.04
SCARB1-205ENST00000538291 FRG2CA6NGY1 282 aa15.31■□□□□ 0.04
SCARB1-205ENST00000538291 TMEM200CA6NKL6 621 aa15.31■□□□□ 0.04
SCARB1-205ENST00000538291 NUPL2O15504 423 aaKnown RBP15.31■□□□□ 0.04
SCARB1-205ENST00000538291 HPNP05981 417 aa15.31■□□□□ 0.04
SCARB1-205ENST00000538291 HTR4Q13639 388 aa15.31■□□□□ 0.04
SCARB1-205ENST00000538291 SHBQ15464 509 aa15.31■□□□□ 0.04
SCARB1-205ENST00000538291 LAIR1Q6GTX8 287 aa15.31■□□□□ 0.04
SCARB1-205ENST00000538291 DLEU7Q6UYE1 221 aa15.31■□□□□ 0.04
SCARB1-205ENST00000538291 TCEAL7Q9BRU2 100 aa15.31■□□□□ 0.04
SCARB1-205ENST00000538291 TIAM2Q8IVF5 1701 aa15.31■□□□□ 0.04
SCARB1-205ENST00000538291 DVL1O14640 695 aa15.3■□□□□ 0.04
SCARB1-205ENST00000538291 IGLV3-25P01717 112 aa15.3■□□□□ 0.04
SCARB1-205ENST00000538291 POU3F3P20264 500 aaPredicted RBP15.3■□□□□ 0.04
SCARB1-205ENST00000538291 DVL1P1P54792 670 aaPredicted RBP15.3■□□□□ 0.04
SCARB1-205ENST00000538291 CCL7P80098 99 aa15.3■□□□□ 0.04
SCARB1-205ENST00000538291 NANOGP1Q8N7R0 232 aa15.3■□□□□ 0.04
SCARB1-205ENST00000538291 SCPEP1Q9HB40 452 aa15.3■□□□□ 0.04
SCARB1-205ENST00000538291 EXOSC3Q9NQT5 275 aaKnown RBP15.3■□□□□ 0.04
SCARB1-205ENST00000538291 POMT2Q9UKY4 750 aa15.3■□□□□ 0.04
SCARB1-205ENST00000538291 NWD2Q9ULI1 1742 aa15.3■□□□□ 0.04
SCARB1-205ENST00000538291 MYH15Q9Y2K3 1946 aa15.3■□□□□ 0.04
SCARB1-205ENST00000538291 SPTY2D1-AS1A0A0U1RR47 76 aa15.3■□□□□ 0.04
SCARB1-205ENST00000538291 Q6ZNB5 142 aa15.3■□□□□ 0.04
SCARB1-205ENST00000538291 TTC9Q92623 222 aa15.3■□□□□ 0.04
SCARB1-205ENST00000538291 RDH5Q92781 318 aa15.3■□□□□ 0.04
SCARB1-205ENST00000538291 C20orf85Q9H1P6 137 aa15.3■□□□□ 0.04
SCARB1-205ENST00000538291 IGHV3-64DA0A0J9YX35 117 aa15.3■□□□□ 0.04
SCARB1-205ENST00000538291 ANKRD61A6NGH8 418 aa15.3■□□□□ 0.04
SCARB1-205ENST00000538291 NKX2-1P43699 371 aaPredicted RBP15.3■□□□□ 0.04
SCARB1-205ENST00000538291 DIO1P49895 249 aa15.3■□□□□ 0.04
SCARB1-205ENST00000538291 TMEM41BQ5BJD5 291 aa15.3■□□□□ 0.04
SCARB1-205ENST00000538291 KISS1RQ969F8 398 aaPredicted RBP15.3■□□□□ 0.04
SCARB1-205ENST00000538291 C3orf49Q96BT1 292 aa15.3■□□□□ 0.04
SCARB1-205ENST00000538291 ATF6BQ99941 703 aa15.3■□□□□ 0.04
SCARB1-205ENST00000538291 TEX101Q9BY14 249 aa15.3■□□□□ 0.04
SCARB1-205ENST00000538291 KLK10O43240 276 aa15.3■□□□□ 0.04
SCARB1-205ENST00000538291 GALR2O43603 387 aaPredicted RBP15.3■□□□□ 0.04
SCARB1-205ENST00000538291 RFC3P40938 356 aa15.3■□□□□ 0.04
SCARB1-205ENST00000538291 INSM1Q01101 510 aaPredicted RBP15.3■□□□□ 0.04
SCARB1-205ENST00000538291 CDC20BQ86Y33 519 aa15.3■□□□□ 0.04
SCARB1-205ENST00000538291 ADGRF3Q8IZF5 1079 aa15.3■□□□□ 0.04
SCARB1-205ENST00000538291 OR10K1Q8NGX5 313 aa15.3■□□□□ 0.04
SCARB1-205ENST00000538291 SIAEQ9HAT2 523 aa15.3■□□□□ 0.04
SCARB1-205ENST00000538291 UGT2A1Q9Y4X1 527 aa15.3■□□□□ 0.04
SCARB1-205ENST00000538291 TNFSF11O14788 317 aa15.3■□□□□ 0.04
SCARB1-205ENST00000538291 ACKR3P25106 362 aa15.3■□□□□ 0.04
SCARB1-205ENST00000538291 SYT6Q5T7P8 510 aaPredicted RBP15.3■□□□□ 0.04
SCARB1-205ENST00000538291 KCNG2Q9UJ96 466 aa15.3■□□□□ 0.04
SCARB1-205ENST00000538291 NUP98P52948 1817 aa15.3■□□□□ 0.04
SCARB1-205ENST00000538291 TRPM3Q9HCF6 1732 aaPredicted RBP15.29■□□□□ 0.04
SCARB1-205ENST00000538291 ST8SIA3O43173 380 aa15.29■□□□□ 0.04
SCARB1-205ENST00000538291 HRO43593 1189 aa15.29■□□□□ 0.04
SCARB1-205ENST00000538291 PGFP49763 221 aa15.29■□□□□ 0.04
SCARB1-205ENST00000538291 RAB5CP51148 216 aa15.29■□□□□ 0.04
SCARB1-205ENST00000538291 LHX8Q68G74 356 aa15.29■□□□□ 0.04
SCARB1-205ENST00000538291 OR11G2Q8NGC1 345 aa15.29■□□□□ 0.04
SCARB1-205ENST00000538291 NIPSNAP3BQ9BS92 247 aa15.29■□□□□ 0.04
SCARB1-205ENST00000538291 S1PR5Q9H228 398 aa15.29■□□□□ 0.04
SCARB1-205ENST00000538291 GPR84Q9NQS5 396 aa15.29■□□□□ 0.04
SCARB1-205ENST00000538291 HDGFL3Q9Y3E1 203 aa15.29■□□□□ 0.04
SCARB1-205ENST00000538291 AQP7O14520 342 aa15.29■□□□□ 0.04
SCARB1-205ENST00000538291 CCR6P51684 374 aa15.29■□□□□ 0.04
SCARB1-205ENST00000538291 TCTN3Q6NUS6 607 aa15.29■□□□□ 0.04
SCARB1-205ENST00000538291 SLC38A9Q8NBW4 561 aa15.29■□□□□ 0.04
SCARB1-205ENST00000538291 LINC00615Q96LM1 132 aaPredicted RBP15.29■□□□□ 0.04
SCARB1-205ENST00000538291 PATZ1Q9HBE1 687 aaKnown RBP15.29■□□□□ 0.04
SCARB1-205ENST00000538291 PURGQ9UJV8 347 aaKnown RBP15.29■□□□□ 0.04
SCARB1-205ENST00000538291 VIRMAQ69YN4 1812 aaKnown RBP15.29■□□□□ 0.04
SCARB1-205ENST00000538291 CCR2P41597 374 aa15.29■□□□□ 0.04
SCARB1-205ENST00000538291 RPL34P49207 117 aaKnown RBP15.29■□□□□ 0.04
SCARB1-205ENST00000538291 MPPED2Q15777 294 aa15.29■□□□□ 0.04
SCARB1-205ENST00000538291 THNSL2Q86YJ6 484 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms