RNA–Protein interactions for RNA: ENST00000538224.1

USP28-206, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-206ENST00000538224 ITGA5P08648 1049 aa5.91□□□□□ -1.46
USP28-206ENST00000538224 GSTT2P0CG29 244 aa5.91□□□□□ -1.46
USP28-206ENST00000538224 AKAIN1P0CW23 69 aa5.91□□□□□ -1.46
USP28-206ENST00000538224 SULT1A3P0DMM9 295 aa5.91□□□□□ -1.46
USP28-206ENST00000538224 SULT1A4P0DMN0 295 aa5.91□□□□□ -1.46
USP28-206ENST00000538224 LIFP15018 202 aa5.91□□□□□ -1.46
USP28-206ENST00000538224 CPN1P15169 458 aa5.91□□□□□ -1.46
USP28-206ENST00000538224 ZNF20P17024 532 aa5.91□□□□□ -1.46
USP28-206ENST00000538224 CSRP1P21291 193 aaKnown RBP5.91□□□□□ -1.46
USP28-206ENST00000538224 BDKRB2P30411 391 aa5.91□□□□□ -1.46
USP28-206ENST00000538224 PRSS3P35030 304 aa5.91□□□□□ -1.46
USP28-206ENST00000538224 RCVRNP35243 200 aa5.91□□□□□ -1.46
USP28-206ENST00000538224 GSK3AP49840 483 aa5.91□□□□□ -1.46
USP28-206ENST00000538224 P2RY4P51582 365 aa5.91□□□□□ -1.46
USP28-206ENST00000538224 FOXL2P58012 376 aa5.91□□□□□ -1.46
USP28-206ENST00000538224 MLF1P58340 268 aa5.91□□□□□ -1.46
USP28-206ENST00000538224 LSM6P62312 80 aaKnown RBP5.91□□□□□ -1.46
USP28-206ENST00000538224 IFITM2Q01629 132 aa5.91□□□□□ -1.46
USP28-206ENST00000538224 FMODQ06828 376 aa5.91□□□□□ -1.46
USP28-206ENST00000538224 CHAF1BQ13112 559 aa5.91□□□□□ -1.46
USP28-206ENST00000538224 ZMYND11Q15326 602 aa5.91□□□□□ -1.46
USP28-206ENST00000538224 FCN2Q15485 313 aa5.91□□□□□ -1.46
USP28-206ENST00000538224 TAF13Q15543 124 aa5.91□□□□□ -1.46
USP28-206ENST00000538224 ETFDHQ16134 617 aa5.91□□□□□ -1.46
USP28-206ENST00000538224 HIST3H3Q16695 136 aa5.91□□□□□ -1.46
USP28-206ENST00000538224 ODF4Q2M2E3 257 aa5.91□□□□□ -1.46
USP28-206ENST00000538224 SMUG1Q53HV7 270 aa5.91□□□□□ -1.46
USP28-206ENST00000538224 C1orf100Q5SVJ3 147 aa5.91□□□□□ -1.46
USP28-206ENST00000538224 LCN10Q6JVE6 187 aa5.91□□□□□ -1.46
USP28-206ENST00000538224 LRFN4Q6PJG9 635 aa5.91□□□□□ -1.46
USP28-206ENST00000538224 SLC25A47Q6Q0C1 308 aa5.91□□□□□ -1.46
USP28-206ENST00000538224 TMPPEQ6ZT21 453 aa5.91□□□□□ -1.46
USP28-206ENST00000538224 CREB3L2Q70SY1 520 aa5.91□□□□□ -1.46
USP28-206ENST00000538224 ZNF767PQ75MW2 155 aa5.91□□□□□ -1.46
USP28-206ENST00000538224 PGAP1Q75T13 922 aa5.91□□□□□ -1.46
USP28-206ENST00000538224 PRSS45Q7RTY3 260 aa5.91□□□□□ -1.46
USP28-206ENST00000538224 RPS19BP1Q86WX3 136 aaKnown RBP5.91□□□□□ -1.46
USP28-206ENST00000538224 IZUMO1Q8IYV9 350 aa5.91□□□□□ -1.46
USP28-206ENST00000538224 ELMOD2Q8IZ81 293 aa5.91□□□□□ -1.46
USP28-206ENST00000538224 MAML2Q8IZL2 1156 aaPredicted RBP5.91□□□□□ -1.46
USP28-206ENST00000538224 SLC22A24Q8N4F4 322 aa5.91□□□□□ -1.46
USP28-206ENST00000538224 DTX3Q8N9I9 347 aa5.91□□□□□ -1.46
USP28-206ENST00000538224 WDSUB1Q8N9V3 476 aa5.91□□□□□ -1.46
USP28-206ENST00000538224 DNAAF1Q8NEP3 725 aa5.91□□□□□ -1.46
USP28-206ENST00000538224 OR11G2Q8NGC1 345 aa5.91□□□□□ -1.46
USP28-206ENST00000538224 OR51D1Q8NGF3 324 aa5.91□□□□□ -1.46
USP28-206ENST00000538224 OR51A4Q8NGJ6 313 aa5.91□□□□□ -1.46
USP28-206ENST00000538224 OR5D14Q8NGL3 314 aa5.91□□□□□ -1.46
USP28-206ENST00000538224 OR1J4Q8NGS1 313 aa5.91□□□□□ -1.46
USP28-206ENST00000538224 OR10AC1Q8NH08 325 aa5.91□□□□□ -1.46
USP28-206ENST00000538224 KCNE4Q8WWG9 221 aa5.91□□□□□ -1.46
USP28-206ENST00000538224 ATOH1Q92858 354 aaPredicted RBP5.91□□□□□ -1.46
USP28-206ENST00000538224 ORAI1Q96D31 301 aa5.91□□□□□ -1.46
USP28-206ENST00000538224 RADILQ96JH8 1075 aa5.91□□□□□ -1.46
USP28-206ENST00000538224 FOXN4Q96NZ1 517 aa5.91□□□□□ -1.46
USP28-206ENST00000538224 PIGQQ9BRB3 760 aa5.91□□□□□ -1.46
USP28-206ENST00000538224 NUDT16L1Q9BRJ7 211 aaKnown RBP5.91□□□□□ -1.46
USP28-206ENST00000538224 DDA1Q9BW61 102 aa5.91□□□□□ -1.46
USP28-206ENST00000538224 BEX2Q9BXY8 128 aa5.91□□□□□ -1.46
USP28-206ENST00000538224 METTL17Q9H7H0 456 aaPredicted RBP5.91□□□□□ -1.46
USP28-206ENST00000538224 G6PC2Q9NQR9 355 aa5.91□□□□□ -1.46
USP28-206ENST00000538224 FSCN3Q9NQT6 498 aa5.91□□□□□ -1.46
USP28-206ENST00000538224 CENPMQ9NSP4 180 aa5.91□□□□□ -1.46
USP28-206ENST00000538224 FAM206AQ9NX38 181 aa5.91□□□□□ -1.46
USP28-206ENST00000538224 TAS2R4Q9NYW5 299 aa5.91□□□□□ -1.46
USP28-206ENST00000538224 SCP2D1Q9UJQ7 156 aa5.91□□□□□ -1.46
USP28-206ENST00000538224 ZNF222Q9UK12 451 aa5.91□□□□□ -1.46
USP28-206ENST00000538224 FBXL2Q9UKC9 423 aa5.91□□□□□ -1.46
USP28-206ENST00000538224 SLC22A13Q9Y226 551 aa5.91□□□□□ -1.46
USP28-206ENST00000538224 PCDHGA5Q9Y5G8 931 aa5.91□□□□□ -1.46
USP28-206ENST00000538224 A0A1B0GTH9 108 aa5.9□□□□□ -1.46
USP28-206ENST00000538224 TMEM272A0A1B0GTI8 110 aa5.9□□□□□ -1.46
USP28-206ENST00000538224 UBE2QL1A1L167 161 aa5.9□□□□□ -1.46
USP28-206ENST00000538224 NPIPA2E9PIF3 369 aa5.9□□□□□ -1.46
USP28-206ENST00000538224 NPIPA3F8WFD2 350 aa5.9□□□□□ -1.46
USP28-206ENST00000538224 SYT7O43581 403 aa5.9□□□□□ -1.46
USP28-206ENST00000538224 CREBL2O60519 120 aaPredicted RBP5.9□□□□□ -1.46
USP28-206ENST00000538224 MPZL1O95297 269 aa5.9□□□□□ -1.46
USP28-206ENST00000538224 WISP1O95388 367 aa5.9□□□□□ -1.46
USP28-206ENST00000538224 BPNT1O95861 308 aa5.9□□□□□ -1.46
USP28-206ENST00000538224 PDGFBP01127 241 aaPredicted RBP5.9□□□□□ -1.46
USP28-206ENST00000538224 P04436 131 aa5.9□□□□□ -1.46
USP28-206ENST00000538224 LPLP06858 475 aa5.9□□□□□ -1.46
USP28-206ENST00000538224 ACSM4P0C7M7 580 aa5.9□□□□□ -1.46
USP28-206ENST00000538224 UBBP0CG47 229 aa5.9□□□□□ -1.46
USP28-206ENST00000538224 ZNF28P17035 718 aa5.9□□□□□ -1.46
USP28-206ENST00000538224 RAB3AP20336 220 aa5.9□□□□□ -1.46
USP28-206ENST00000538224 SRD5A2P31213 254 aa5.9□□□□□ -1.46
USP28-206ENST00000538224 SFTPDP35247 375 aa5.9□□□□□ -1.46
USP28-206ENST00000538224 GNALP38405 381 aa5.9□□□□□ -1.46
USP28-206ENST00000538224 MPLP40238 635 aa5.9□□□□□ -1.46
USP28-206ENST00000538224 MAGEB1P43366 347 aa5.9□□□□□ -1.46
USP28-206ENST00000538224 CSNK1A1P48729 337 aa5.9□□□□□ -1.46
USP28-206ENST00000538224 ZNF84P51523 738 aa5.9□□□□□ -1.46
USP28-206ENST00000538224 CCR6P51684 374 aa5.9□□□□□ -1.46
USP28-206ENST00000538224 ZNF133P52736 654 aaPredicted RBP5.9□□□□□ -1.46
USP28-206ENST00000538224 TAS2R19P59542 299 aa5.9□□□□□ -1.46
USP28-206ENST00000538224 GABREP78334 506 aa5.9□□□□□ -1.46
USP28-206ENST00000538224 CTAG1AP78358 180 aa5.9□□□□□ -1.46
USP28-206ENST00000538224 SF3B4Q15427 424 aaKnown RBP eCLIP5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms