RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 SLC5A6Q9Y289 635 aa13.67□□□□□ -0.22
SFSWAP-206ENST00000537582 CAB39Q9Y376 341 aaPredicted RBP13.67□□□□□ -0.22
SFSWAP-206ENST00000537582 TMEM14AQ9Y6G1 99 aa13.67□□□□□ -0.22
SFSWAP-206ENST00000537582 ZNF462Q96JM2 2506 aa13.67□□□□□ -0.22
SFSWAP-206ENST00000537582 MYO7BQ6PIF6 2116 aa13.67□□□□□ -0.22
SFSWAP-206ENST00000537582 PNMA8CA0A1B0GUJ8 204 aa13.66□□□□□ -0.22
SFSWAP-206ENST00000537582 TMCC2O75069 709 aa13.66□□□□□ -0.22
SFSWAP-206ENST00000537582 RPP14O95059 124 aaKnown RBP13.66□□□□□ -0.22
SFSWAP-206ENST00000537582 FARS2O95363 451 aaKnown RBP13.66□□□□□ -0.22
SFSWAP-206ENST00000537582 HSMCR30P0CW71 290 aa13.66□□□□□ -0.22
SFSWAP-206ENST00000537582 ANOS1P23352 680 aa13.66□□□□□ -0.22
SFSWAP-206ENST00000537582 PSMB9P28065 219 aa13.66□□□□□ -0.22
SFSWAP-206ENST00000537582 CCKARP32238 428 aa13.66□□□□□ -0.22
SFSWAP-206ENST00000537582 OPRL1P41146 370 aa13.66□□□□□ -0.22
SFSWAP-206ENST00000537582 WNT4P56705 351 aa13.66□□□□□ -0.22
SFSWAP-206ENST00000537582 P2RY6Q15077 328 aa13.66□□□□□ -0.22
SFSWAP-206ENST00000537582 SPHARQ15513 63 aa13.66□□□□□ -0.22
SFSWAP-206ENST00000537582 NRN1LQ496H8 165 aa13.66□□□□□ -0.22
SFSWAP-206ENST00000537582 UBE2UQ5VVX9 321 aa13.66□□□□□ -0.22
SFSWAP-206ENST00000537582 BHLHA15Q7RTS1 189 aaPredicted RBP13.66□□□□□ -0.22
SFSWAP-206ENST00000537582 WDR31Q8NA23 367 aa13.66□□□□□ -0.22
SFSWAP-206ENST00000537582 OR52N1Q8NH53 320 aa13.66□□□□□ -0.22
SFSWAP-206ENST00000537582 RNF133Q8WVZ7 376 aa13.66□□□□□ -0.22
SFSWAP-206ENST00000537582 PELI1Q96FA3 418 aa13.66□□□□□ -0.22
SFSWAP-206ENST00000537582 MNTQ99583 582 aa13.66□□□□□ -0.22
SFSWAP-206ENST00000537582 OR2H1Q9GZK4 316 aa13.66□□□□□ -0.22
SFSWAP-206ENST00000537582 SLC24A3Q9HC58 644 aa13.66□□□□□ -0.22
SFSWAP-206ENST00000537582 GALNT8Q9NY28 637 aa13.66□□□□□ -0.22
SFSWAP-206ENST00000537582 LRP12Q9Y561 859 aa13.66□□□□□ -0.22
SFSWAP-206ENST00000537582 SIRT4Q9Y6E7 314 aaPredicted RBP13.66□□□□□ -0.22
SFSWAP-206ENST00000537582 NKX2-6A6NCS4 301 aa13.66□□□□□ -0.22
SFSWAP-206ENST00000537582 AGFG2O95081 481 aa13.66□□□□□ -0.22
SFSWAP-206ENST00000537582 DBHP09172 617 aa13.66□□□□□ -0.22
SFSWAP-206ENST00000537582 TGFBR3Q03167 851 aa13.66□□□□□ -0.22
SFSWAP-206ENST00000537582 ROM1Q03395 351 aa13.66□□□□□ -0.22
SFSWAP-206ENST00000537582 EGR3Q06889 387 aa13.66□□□□□ -0.22
SFSWAP-206ENST00000537582 LSAMPQ13449 338 aa13.66□□□□□ -0.22
SFSWAP-206ENST00000537582 C4orf17Q53FE4 359 aa13.66□□□□□ -0.22
SFSWAP-206ENST00000537582 PABPC1L2AQ5JQF8 200 aa13.66□□□□□ -0.22
SFSWAP-206ENST00000537582 LIPNQ5VXI9 398 aa13.66□□□□□ -0.22
SFSWAP-206ENST00000537582 VASH1Q7L8A9 365 aaPredicted RBP13.66□□□□□ -0.22
SFSWAP-206ENST00000537582 KRT77Q7Z794 578 aa13.66□□□□□ -0.22
SFSWAP-206ENST00000537582 YIPF7Q8N8F6 280 aa13.66□□□□□ -0.22
SFSWAP-206ENST00000537582 CPEB3Q8NE35 698 aaKnown RBP13.66□□□□□ -0.22
SFSWAP-206ENST00000537582 ASB17Q8WXJ9 295 aa13.66□□□□□ -0.22
SFSWAP-206ENST00000537582 S100PBPQ96BU1 408 aa13.66□□□□□ -0.22
SFSWAP-206ENST00000537582 OPALINQ96PE5 141 aa13.66□□□□□ -0.22
SFSWAP-206ENST00000537582 RNF121Q9H920 327 aa13.66□□□□□ -0.22
SFSWAP-206ENST00000537582 PLEK2Q9NYT0 353 aa13.66□□□□□ -0.22
SFSWAP-206ENST00000537582 PCNX1Q96RV3 2341 aa13.66□□□□□ -0.22
SFSWAP-206ENST00000537582 NCOA6Q14686 2063 aaPredicted RBP13.65□□□□□ -0.22
SFSWAP-206ENST00000537582 A0A1B0GUH1 482 aa13.65□□□□□ -0.22
SFSWAP-206ENST00000537582 METTL15A6NJ78 407 aa13.65□□□□□ -0.22
SFSWAP-206ENST00000537582 PHYHO14832 338 aa13.65□□□□□ -0.22
SFSWAP-206ENST00000537582 SGCEO43556 437 aa13.65□□□□□ -0.22
SFSWAP-206ENST00000537582 DOK2O60496 412 aa13.65□□□□□ -0.22
SFSWAP-206ENST00000537582 MT-ND5P03915 603 aa13.65□□□□□ -0.22
SFSWAP-206ENST00000537582 KRT8P05787 483 aa13.65□□□□□ -0.22
SFSWAP-206ENST00000537582 JUNBP17275 347 aaPredicted RBP13.65□□□□□ -0.22
SFSWAP-206ENST00000537582 CHRNB4P30926 498 aa13.65□□□□□ -0.22
SFSWAP-206ENST00000537582 ACTA2P62736 377 aa13.65□□□□□ -0.22
SFSWAP-206ENST00000537582 ACTG2P63267 376 aa13.65□□□□□ -0.22
SFSWAP-206ENST00000537582 MFGE8Q08431 387 aaPredicted RBP13.65□□□□□ -0.22
SFSWAP-206ENST00000537582 ESPL1Q14674 2120 aa13.65□□□□□ -0.22
SFSWAP-206ENST00000537582 RSPO1Q2MKA7 263 aaPredicted RBP13.65□□□□□ -0.22
SFSWAP-206ENST00000537582 TMPRSS11AQ6ZMR5 421 aa13.65□□□□□ -0.22
SFSWAP-206ENST00000537582 C22orf34Q6ZV56 151 aa13.65□□□□□ -0.22
SFSWAP-206ENST00000537582 ZNF367Q7RTV3 350 aa13.65□□□□□ -0.22
SFSWAP-206ENST00000537582 MDP1Q86V88 176 aa13.65□□□□□ -0.22
SFSWAP-206ENST00000537582 MYPOPQ86VE0 399 aaPredicted RBP13.65□□□□□ -0.22
SFSWAP-206ENST00000537582 ZNF679Q8IYX0 411 aa13.65□□□□□ -0.22
SFSWAP-206ENST00000537582 GJC3Q8NFK1 279 aa13.65□□□□□ -0.22
SFSWAP-206ENST00000537582 RORBQ92753 470 aa13.65□□□□□ -0.22
SFSWAP-206ENST00000537582 C1QTNF6Q9BXI9 259 aa13.65□□□□□ -0.22
SFSWAP-206ENST00000537582 SLC17A5Q9NRA2 495 aa13.65□□□□□ -0.22
SFSWAP-206ENST00000537582 B3GNT2Q9NY97 397 aa13.65□□□□□ -0.22
SFSWAP-206ENST00000537582 ERRFI1Q9UJM3 462 aaPredicted RBP13.65□□□□□ -0.22
SFSWAP-206ENST00000537582 TIMM10BQ9Y5J6 103 aa13.65□□□□□ -0.22
SFSWAP-206ENST00000537582 SYNGR3O43761 229 aa13.64□□□□□ -0.23
SFSWAP-206ENST00000537582 ZG16O60844 167 aa13.64□□□□□ -0.23
SFSWAP-206ENST00000537582 PNPP00491 289 aa13.64□□□□□ -0.23
SFSWAP-206ENST00000537582 CELA3BP08861 270 aa13.64□□□□□ -0.23
SFSWAP-206ENST00000537582 H2BFMP0C1H6 154 aa13.64□□□□□ -0.23
SFSWAP-206ENST00000537582 IL32P24001 234 aa13.64□□□□□ -0.23
SFSWAP-206ENST00000537582 NANOS3P60323 173 aaKnown RBP13.64□□□□□ -0.23
SFSWAP-206ENST00000537582 RAB1AP62820 205 aa13.64□□□□□ -0.23
SFSWAP-206ENST00000537582 SCRN3Q0VDG4 424 aa13.64□□□□□ -0.23
SFSWAP-206ENST00000537582 RAB39AQ14964 217 aa13.64□□□□□ -0.23
SFSWAP-206ENST00000537582 TIGD6Q17RP2 521 aa13.64□□□□□ -0.23
SFSWAP-206ENST00000537582 SLC36A2Q495M3 483 aa13.64□□□□□ -0.23
SFSWAP-206ENST00000537582 ELFN2Q5R3F8 820 aa13.64□□□□□ -0.23
SFSWAP-206ENST00000537582 ZNF584Q8IVC4 421 aa13.64□□□□□ -0.23
SFSWAP-206ENST00000537582 SYS1Q8N2H4 156 aa13.64□□□□□ -0.23
SFSWAP-206ENST00000537582 C1orf162Q8NEQ5 155 aaPredicted RBP13.64□□□□□ -0.23
SFSWAP-206ENST00000537582 PPP1R14AQ96A00 147 aa13.64□□□□□ -0.23
SFSWAP-206ENST00000537582 MS4A3Q96HJ5 214 aa13.64□□□□□ -0.23
SFSWAP-206ENST00000537582 COG8Q96MW5 612 aa13.64□□□□□ -0.23
SFSWAP-206ENST00000537582 MGLLQ99685 303 aa13.64□□□□□ -0.23
SFSWAP-206ENST00000537582 KCNN2Q9H2S1 579 aa13.64□□□□□ -0.23
SFSWAP-206ENST00000537582 BABAM2Q9NXR7 383 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms