RNA–Protein interactions for RNA: ENST00000537178.5

CLIP1-209, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLIP1, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-209ENST00000537178 MOB1AQ9H8S9 216 aa9.74□□□□□ -0.85
CLIP1-209ENST00000537178 CGGBP1Q9UFW8 167 aaPredicted RBP9.74□□□□□ -0.85
CLIP1-209ENST00000537178 GOLT1BQ9Y3E0 138 aa9.74□□□□□ -0.85
CLIP1-209ENST00000537178 ZNF727A8MUV8 499 aa9.74□□□□□ -0.85
CLIP1-209ENST00000537178 APOBEC1P41238 236 aaKnown RBP9.74□□□□□ -0.85
CLIP1-209ENST00000537178 FCRL6Q6DN72 434 aa9.74□□□□□ -0.85
CLIP1-209ENST00000537178 NIPSNAP1Q9BPW8 284 aa9.74□□□□□ -0.85
CLIP1-209ENST00000537178 ABCD4O14678 606 aa9.74□□□□□ -0.85
CLIP1-209ENST00000537178 RRP8O43159 456 aaKnown RBP9.74□□□□□ -0.85
CLIP1-209ENST00000537178 ICMTO60725 284 aa9.74□□□□□ -0.85
CLIP1-209ENST00000537178 EDN1P05305 212 aa9.74□□□□□ -0.85
CLIP1-209ENST00000537178 SBK2P0C263 348 aa9.74□□□□□ -0.85
CLIP1-209ENST00000537178 CPN1P15169 458 aa9.74□□□□□ -0.85
CLIP1-209ENST00000537178 CD1EP15812 388 aa9.74□□□□□ -0.85
CLIP1-209ENST00000537178 ZNF26P17031 533 aaPredicted RBP9.74□□□□□ -0.85
CLIP1-209ENST00000537178 ALOX5APP20292 161 aa9.74□□□□□ -0.85
CLIP1-209ENST00000537178 LBX1P52954 281 aa9.74□□□□□ -0.85
CLIP1-209ENST00000537178 P2RX3P56373 397 aa9.74□□□□□ -0.85
CLIP1-209ENST00000537178 DEFB103AP81534 67 aa9.74□□□□□ -0.85
CLIP1-209ENST00000537178 LIPNQ5VXI9 398 aa9.74□□□□□ -0.85
CLIP1-209ENST00000537178 LILRA2Q8N149 483 aa9.74□□□□□ -0.85
CLIP1-209ENST00000537178 SLC16A11Q8NCK7 471 aa9.74□□□□□ -0.85
CLIP1-209ENST00000537178 LHX4Q969G2 390 aa9.74□□□□□ -0.85
CLIP1-209ENST00000537178 ZIC5Q96T25 663 aa9.74□□□□□ -0.85
CLIP1-209ENST00000537178 DLL4Q9NR61 685 aa9.74□□□□□ -0.85
CLIP1-209ENST00000537178 KIAA1456Q9P272 454 aa9.74□□□□□ -0.85
CLIP1-209ENST00000537178 CACFD1Q9UGQ2 172 aa9.74□□□□□ -0.85
CLIP1-209ENST00000537178 COA3Q9Y2R0 106 aaPredicted RBP9.74□□□□□ -0.85
CLIP1-209ENST00000537178 BOLA1Q9Y3E2 137 aa9.74□□□□□ -0.85
CLIP1-209ENST00000537178 FLVCR1Q9Y5Y0 555 aa9.74□□□□□ -0.85
CLIP1-209ENST00000537178 SOCS7O14512 581 aa9.73□□□□□ -0.85
CLIP1-209ENST00000537178 C1QBP02746 253 aa9.73□□□□□ -0.85
CLIP1-209ENST00000537178 SMIM18P0DKX4 95 aa9.73□□□□□ -0.85
CLIP1-209ENST00000537178 SPP1P10451 314 aa9.73□□□□□ -0.85
CLIP1-209ENST00000537178 ERVFC1P60507 584 aa9.73□□□□□ -0.85
CLIP1-209ENST00000537178 MORN1Q5T089 497 aa9.73□□□□□ -0.85
CLIP1-209ENST00000537178 ZNF620Q6ZNG0 422 aa9.73□□□□□ -0.85
CLIP1-209ENST00000537178 TMEM182Q6ZP80 229 aaPredicted RBP9.73□□□□□ -0.85
CLIP1-209ENST00000537178 OR2L13Q8N349 312 aa9.73□□□□□ -0.85
CLIP1-209ENST00000537178 OR10P1Q8NGE3 313 aa9.73□□□□□ -0.85
CLIP1-209ENST00000537178 ARRDC3Q96B67 414 aa9.73□□□□□ -0.85
CLIP1-209ENST00000537178 S1PR3Q99500 378 aa9.73□□□□□ -0.85
CLIP1-209ENST00000537178 CHRDL1Q9BU40 450 aa9.73□□□□□ -0.85
CLIP1-209ENST00000537178 NKX6-2Q9C056 277 aaPredicted RBP9.73□□□□□ -0.85
CLIP1-209ENST00000537178 ACTR3CQ9C0K3 210 aaPredicted RBP9.73□□□□□ -0.85
CLIP1-209ENST00000537178 KNL1Q8NG31 2342 aa9.73□□□□□ -0.85
CLIP1-209ENST00000537178 CENPFP49454 3210 aa9.73□□□□□ -0.85
CLIP1-209ENST00000537178 DNAJC25-GNG10A0A024R161 153 aa9.73□□□□□ -0.85
CLIP1-209ENST00000537178 A0A1B0GX78 115 aa9.73□□□□□ -0.85
CLIP1-209ENST00000537178 OR2A25A4D2G3 310 aa9.73□□□□□ -0.85
CLIP1-209ENST00000537178 RAB27BO00194 218 aa9.73□□□□□ -0.85
CLIP1-209ENST00000537178 CYTIPO60759 359 aa9.73□□□□□ -0.85
CLIP1-209ENST00000537178 NXPH3O95157 252 aa9.73□□□□□ -0.85
CLIP1-209ENST00000537178 MBP02144 154 aa9.73□□□□□ -0.85
CLIP1-209ENST00000537178 MMP11P24347 488 aa9.73□□□□□ -0.85
CLIP1-209ENST00000537178 LIPAP38571 399 aa9.73□□□□□ -0.85
CLIP1-209ENST00000537178 CSNK1G2P78368 415 aa9.73□□□□□ -0.85
CLIP1-209ENST00000537178 OR8G1Q15617 311 aa9.73□□□□□ -0.85
CLIP1-209ENST00000537178 ELAVL1Q15717 326 aaKnown RBP9.73□□□□□ -0.85
CLIP1-209ENST00000537178 BAK1Q16611 211 aa9.73□□□□□ -0.85
CLIP1-209ENST00000537178 TRIM61Q5EBN2 209 aa9.73□□□□□ -0.85
CLIP1-209ENST00000537178 FAM71E1Q6IPT2 247 aa9.73□□□□□ -0.85
CLIP1-209ENST00000537178 ACOT7LQ6ZUV0 252 aa9.73□□□□□ -0.85
CLIP1-209ENST00000537178 CAMKMTQ7Z624 323 aa9.73□□□□□ -0.85
CLIP1-209ENST00000537178 MARCH3Q86UD3 253 aa9.73□□□□□ -0.85
CLIP1-209ENST00000537178 CDH26Q8IXH8 852 aa9.73□□□□□ -0.85
CLIP1-209ENST00000537178 ZNF321PQ8N8H1 164 aa9.73□□□□□ -0.85
CLIP1-209ENST00000537178 BHLHE23Q8NDY6 225 aa9.73□□□□□ -0.85
CLIP1-209ENST00000537178 TEAD3Q99594 435 aa9.73□□□□□ -0.85
CLIP1-209ENST00000537178 HDAC8Q9BY41 377 aa9.73□□□□□ -0.85
CLIP1-209ENST00000537178 BARX1Q9HBU1 254 aaPredicted RBP9.73□□□□□ -0.85
CLIP1-209ENST00000537178 LYRM4Q9HD34 91 aa9.73□□□□□ -0.85
CLIP1-209ENST00000537178 DNAJC13O75165 2243 aa9.73□□□□□ -0.85
CLIP1-209ENST00000537178 SELENOFO60613 162 aa9.73□□□□□ -0.85
CLIP1-209ENST00000537178 UBE2IP63279 158 aaKnown RBP9.73□□□□□ -0.85
CLIP1-209ENST00000537178 FAM78AQ5JUQ0 283 aa9.73□□□□□ -0.85
CLIP1-209ENST00000537178 PLXDC2Q6UX71 529 aa9.73□□□□□ -0.85
CLIP1-209ENST00000537178 RHOUQ7L0Q8 258 aa9.73□□□□□ -0.85
CLIP1-209ENST00000537178 CDC20BQ86Y33 519 aa9.73□□□□□ -0.85
CLIP1-209ENST00000537178 NHLRC2Q8NBF2 726 aa9.73□□□□□ -0.85
CLIP1-209ENST00000537178 SLC38A9Q8NBW4 561 aa9.73□□□□□ -0.85
CLIP1-209ENST00000537178 TSLPQ969D9 159 aa9.73□□□□□ -0.85
CLIP1-209ENST00000537178 C10orf90Q96M02 699 aa9.73□□□□□ -0.85
CLIP1-209ENST00000537178 OR2A14Q96R47 310 aa9.73□□□□□ -0.85
CLIP1-209ENST00000537178 ATF6BQ99941 703 aa9.73□□□□□ -0.85
CLIP1-209ENST00000537178 C20orf24Q9BUV8 137 aa9.73□□□□□ -0.85
CLIP1-209ENST00000537178 CHST8Q9H2A9 424 aa9.73□□□□□ -0.85
CLIP1-209ENST00000537178 BANF2Q9H503 90 aa9.73□□□□□ -0.85
CLIP1-209ENST00000537178 SLC2A8Q9NY64 477 aa9.73□□□□□ -0.85
CLIP1-209ENST00000537178 UMAD1C9J7I0 102 aa9.73□□□□□ -0.85
CLIP1-209ENST00000537178 SOD1P00441 154 aa9.73□□□□□ -0.85
CLIP1-209ENST00000537178 S100A8P05109 93 aa9.73□□□□□ -0.85
CLIP1-209ENST00000537178 FBP1P09467 338 aa9.73□□□□□ -0.85
CLIP1-209ENST00000537178 TEKQ02763 1124 aa9.73□□□□□ -0.85
CLIP1-209ENST00000537178 COX20Q5RI15 118 aa9.73□□□□□ -0.85
CLIP1-209ENST00000537178 SIGLECL1Q8N7X8 197 aa9.73□□□□□ -0.85
CLIP1-209ENST00000537178 GPR78Q96P69 363 aa9.73□□□□□ -0.85
CLIP1-209ENST00000537178 DCBLD2Q96PD2 775 aa9.73□□□□□ -0.85
CLIP1-209ENST00000537178 PLEKHA2Q9HB19 425 aa9.73□□□□□ -0.85
CLIP1-209ENST00000537178 PAPPA2Q9BXP8 1791 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms