RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 G3V3Q6 166 aa4.92□□□□□ -1.62
PTPRD-213ENST00000537002 MKRN2OSH3BPM6 223 aa4.92□□□□□ -1.62
PTPRD-213ENST00000537002 CD79AP11912 226 aa4.92□□□□□ -1.62
PTPRD-213ENST00000537002 POU3F2P20265 443 aaPredicted RBP4.92□□□□□ -1.62
PTPRD-213ENST00000537002 CRABP1P29762 137 aa4.92□□□□□ -1.62
PTPRD-213ENST00000537002 GPR18Q14330 331 aa4.92□□□□□ -1.62
PTPRD-213ENST00000537002 ZNF620Q6ZNG0 422 aa4.92□□□□□ -1.62
PTPRD-213ENST00000537002 UBE3DQ7Z6J8 389 aa4.92□□□□□ -1.62
PTPRD-213ENST00000537002 TDHQ8IZJ6 230 aa4.92□□□□□ -1.62
PTPRD-213ENST00000537002 CCDC71LQ8N9Z2 235 aa4.92□□□□□ -1.62
PTPRD-213ENST00000537002 OR2G3Q8NGZ4 309 aa4.92□□□□□ -1.62
PTPRD-213ENST00000537002 PHOSPHO2Q8TCD6 241 aa4.92□□□□□ -1.62
PTPRD-213ENST00000537002 OVCA2Q8WZ82 227 aa4.92□□□□□ -1.62
PTPRD-213ENST00000537002 BADQ92934 168 aa4.92□□□□□ -1.62
PTPRD-213ENST00000537002 MYEOVQ96EZ4 313 aa4.92□□□□□ -1.62
PTPRD-213ENST00000537002 BSCL2Q96G97 398 aaPredicted RBP4.92□□□□□ -1.62
PTPRD-213ENST00000537002 SDSLQ96GA7 329 aa4.92□□□□□ -1.62
PTPRD-213ENST00000537002 KIRREL1Q96J84 757 aa4.92□□□□□ -1.62
PTPRD-213ENST00000537002 CCNL2Q96S94 520 aaPredicted RBP4.92□□□□□ -1.62
PTPRD-213ENST00000537002 GPR62Q9BZJ7 368 aa4.92□□□□□ -1.62
PTPRD-213ENST00000537002 COLCA2A8K830 154 aa4.92□□□□□ -1.62
PTPRD-213ENST00000537002 HMGN4O00479 90 aa4.92□□□□□ -1.62
PTPRD-213ENST00000537002 ZNF354AO60765 605 aaPredicted RBP4.92□□□□□ -1.62
PTPRD-213ENST00000537002 CASRP41180 1078 aa4.92□□□□□ -1.62
PTPRD-213ENST00000537002 RANP62826 216 aaKnown RBP4.92□□□□□ -1.62
PTPRD-213ENST00000537002 H3F3AP84243 136 aa4.92□□□□□ -1.62
PTPRD-213ENST00000537002 CLEC12BQ2HXU8 276 aa4.92□□□□□ -1.62
PTPRD-213ENST00000537002 JMJD6Q6NYC1 403 aaPredicted RBP4.92□□□□□ -1.62
PTPRD-213ENST00000537002 ADGRE4PQ86SQ3 457 aa4.92□□□□□ -1.62
PTPRD-213ENST00000537002 BAGE3Q86Y29 109 aa4.92□□□□□ -1.62
PTPRD-213ENST00000537002 BAGE2Q86Y30 109 aa4.92□□□□□ -1.62
PTPRD-213ENST00000537002 ZFP62Q8NB50 900 aaPredicted RBP4.92□□□□□ -1.62
PTPRD-213ENST00000537002 ZNF740Q8NDX6 193 aa4.92□□□□□ -1.62
PTPRD-213ENST00000537002 APOBEC4Q8WW27 367 aaKnown RBP4.92□□□□□ -1.62
PTPRD-213ENST00000537002 ZNF681Q96N22 645 aa4.92□□□□□ -1.62
PTPRD-213ENST00000537002 CA10Q9NS85 328 aa4.92□□□□□ -1.62
PTPRD-213ENST00000537002 PLEKHJ1Q9NW61 149 aa4.92□□□□□ -1.62
PTPRD-213ENST00000537002 KLRF1Q9NZS2 232 aa4.92□□□□□ -1.62
PTPRD-213ENST00000537002 CA14Q9ULX7 337 aa4.92□□□□□ -1.62
PTPRD-213ENST00000537002 HHLA2Q9UM44 414 aa4.92□□□□□ -1.62
PTPRD-213ENST00000537002 FOXJ3Q9UPW0 622 aa4.92□□□□□ -1.62
PTPRD-213ENST00000537002 A0A087X0M5 115 aa4.92□□□□□ -1.62
PTPRD-213ENST00000537002 TRBV6-7A0A0A0MS04 114 aa4.92□□□□□ -1.62
PTPRD-213ENST00000537002 A0A1B0GX30 115 aa4.92□□□□□ -1.62
PTPRD-213ENST00000537002 SLC5A10A0PJK1 596 aa4.92□□□□□ -1.62
PTPRD-213ENST00000537002 B4DEV8 164 aa4.92□□□□□ -1.62
PTPRD-213ENST00000537002 NUDT21O43809 227 aaKnown RBP4.92□□□□□ -1.62
PTPRD-213ENST00000537002 LANCL1O43813 399 aa4.92□□□□□ -1.62
PTPRD-213ENST00000537002 SLC16A7O60669 478 aa4.92□□□□□ -1.62
PTPRD-213ENST00000537002 ZNF25P17030 456 aaPredicted RBP4.92□□□□□ -1.62
PTPRD-213ENST00000537002 EN2P19622 333 aaPredicted RBP4.92□□□□□ -1.62
PTPRD-213ENST00000537002 MSR1P21757 451 aa4.92□□□□□ -1.62
PTPRD-213ENST00000537002 CFPP27918 469 aa4.92□□□□□ -1.62
PTPRD-213ENST00000537002 TEAD1P28347 426 aa4.92□□□□□ -1.62
PTPRD-213ENST00000537002 TACR3P29371 465 aa4.92□□□□□ -1.62
PTPRD-213ENST00000537002 CCINQ13939 588 aa4.92□□□□□ -1.62
PTPRD-213ENST00000537002 INPP5JQ15735 1006 aaPredicted RBP4.92□□□□□ -1.62
PTPRD-213ENST00000537002 ANKRD39Q53RE8 183 aa4.92□□□□□ -1.62
PTPRD-213ENST00000537002 OR2A2Q6IF42 318 aa4.92□□□□□ -1.62
PTPRD-213ENST00000537002 ALKBH2Q6NS38 261 aa4.92□□□□□ -1.62
PTPRD-213ENST00000537002 OR8G5Q8NG78 346 aa4.92□□□□□ -1.62
PTPRD-213ENST00000537002 CCDC74BQ96LY2 380 aa4.92□□□□□ -1.62
PTPRD-213ENST00000537002 GGACTQ9BVM4 153 aa4.92□□□□□ -1.62
PTPRD-213ENST00000537002 CPEB1Q9BZB8 566 aaKnown RBP4.92□□□□□ -1.62
PTPRD-213ENST00000537002 CERS4Q9HA82 394 aa4.92□□□□□ -1.62
PTPRD-213ENST00000537002 VSX1Q9NZR4 365 aaPredicted RBP4.92□□□□□ -1.62
PTPRD-213ENST00000537002 TMEM269A0A1B0GVZ9 245 aa4.92□□□□□ -1.62
PTPRD-213ENST00000537002 MEX3AA1L020 520 aaKnown RBP4.92□□□□□ -1.62
PTPRD-213ENST00000537002 F8VVB4 439 aa4.92□□□□□ -1.62
PTPRD-213ENST00000537002 F8VWA3 439 aa4.92□□□□□ -1.62
PTPRD-213ENST00000537002 RECKO95980 971 aa4.92□□□□□ -1.62
PTPRD-213ENST00000537002 IGHV2-5P01817 119 aa4.92□□□□□ -1.62
PTPRD-213ENST00000537002 HEXBP07686 556 aa4.92□□□□□ -1.62
PTPRD-213ENST00000537002 OR5AC1P0C628 307 aa4.92□□□□□ -1.62
PTPRD-213ENST00000537002 MPZP25189 248 aa4.92□□□□□ -1.62
PTPRD-213ENST00000537002 TRHRP34981 398 aaPredicted RBP4.92□□□□□ -1.62
PTPRD-213ENST00000537002 CRYBA2P53672 197 aa4.92□□□□□ -1.62
PTPRD-213ENST00000537002 TLE4Q04727 773 aa4.92□□□□□ -1.62
PTPRD-213ENST00000537002 GLYATL3Q5SZD4 288 aa4.92□□□□□ -1.62
PTPRD-213ENST00000537002 MRPL2Q5T653 305 aaKnown RBP4.92□□□□□ -1.62
PTPRD-213ENST00000537002 CYB5R2Q6BCY4 276 aa4.92□□□□□ -1.62
PTPRD-213ENST00000537002 OPN5Q6U736 354 aa4.92□□□□□ -1.62
PTPRD-213ENST00000537002 SLCO4C1Q6ZQN7 724 aa4.92□□□□□ -1.62
PTPRD-213ENST00000537002 RASD2Q96D21 266 aa4.92□□□□□ -1.62
PTPRD-213ENST00000537002 OR1F2PQ96R84 312 aa4.92□□□□□ -1.62
PTPRD-213ENST00000537002 NICN1Q9BSH3 213 aa4.92□□□□□ -1.62
PTPRD-213ENST00000537002 COL11A2P13942 1736 aaPredicted RBP4.91□□□□□ -1.62
PTPRD-213ENST00000537002 LNP1A1A4G5 178 aa4.91□□□□□ -1.62
PTPRD-213ENST00000537002 ZNF724A8MTY0 619 aa4.91□□□□□ -1.62
PTPRD-213ENST00000537002 TRDCB7Z8K6 153 aa4.91□□□□□ -1.62
PTPRD-213ENST00000537002 ACRP10323 421 aa4.91□□□□□ -1.62
PTPRD-213ENST00000537002 AVPR2P30518 371 aa4.91□□□□□ -1.62
PTPRD-213ENST00000537002 MOGAT2Q3SYC2 334 aa4.91□□□□□ -1.62
PTPRD-213ENST00000537002 NKAIN2Q5VXU1 208 aa4.91□□□□□ -1.62
PTPRD-213ENST00000537002 ATRAIDQ6UW56 229 aa4.91□□□□□ -1.62
PTPRD-213ENST00000537002 ACOT4Q8N9L9 421 aa4.91□□□□□ -1.62
PTPRD-213ENST00000537002 CMBLQ96DG6 245 aa4.91□□□□□ -1.62
PTPRD-213ENST00000537002 PIK3IP1Q96FE7 263 aa4.91□□□□□ -1.62
PTPRD-213ENST00000537002 MS4A3Q96HJ5 214 aa4.91□□□□□ -1.62
PTPRD-213ENST00000537002 SCLYQ96I15 445 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms