RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 OR1J2Q8NGS2 313 aa12.61□□□□□ -0.39
LIG1-203ENST00000536218 RBM18Q96H35 190 aaKnown RBP12.61□□□□□ -0.39
LIG1-203ENST00000536218 NEU1Q99519 415 aa12.61□□□□□ -0.39
LIG1-203ENST00000536218 TEAD3Q99594 435 aa12.61□□□□□ -0.39
LIG1-203ENST00000536218 MED17Q9NVC6 651 aa12.61□□□□□ -0.39
LIG1-203ENST00000536218 ARID1AO14497 2285 aa12.61□□□□□ -0.39
LIG1-203ENST00000536218 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.61□□□□□ -0.39
LIG1-203ENST00000536218 FAM221BA6H8Z2 402 aa12.61□□□□□ -0.39
LIG1-203ENST00000536218 PSMD9O00233 223 aa12.61□□□□□ -0.39
LIG1-203ENST00000536218 PPP1R3DO95685 299 aa12.61□□□□□ -0.39
LIG1-203ENST00000536218 MBP02144 154 aa12.61□□□□□ -0.39
LIG1-203ENST00000536218 CD53P19397 219 aa12.61□□□□□ -0.39
LIG1-203ENST00000536218 RBM34P42696 430 aaKnown RBP12.61□□□□□ -0.39
LIG1-203ENST00000536218 HSD17B7P56937 341 aa12.61□□□□□ -0.39
LIG1-203ENST00000536218 OVCH1Q7RTY7 1134 aa12.61□□□□□ -0.39
LIG1-203ENST00000536218 BAP18Q8IXM2 172 aa12.61□□□□□ -0.39
LIG1-203ENST00000536218 GRHL3Q8TE85 626 aa12.61□□□□□ -0.39
LIG1-203ENST00000536218 CCDC107Q8WV48 283 aa12.61□□□□□ -0.39
LIG1-203ENST00000536218 MMABQ96EY8 250 aaPredicted RBP12.61□□□□□ -0.39
LIG1-203ENST00000536218 GNG8Q9UK08 70 aa12.61□□□□□ -0.39
LIG1-203ENST00000536218 C9JQL5 133 aa12.61□□□□□ -0.39
LIG1-203ENST00000536218 AGR2O95994 175 aa12.61□□□□□ -0.39
LIG1-203ENST00000536218 IGLV3-19P01714 112 aa12.61□□□□□ -0.39
LIG1-203ENST00000536218 CD79AP11912 226 aa12.61□□□□□ -0.39
LIG1-203ENST00000536218 MYF5P13349 255 aa12.61□□□□□ -0.39
LIG1-203ENST00000536218 KCNAB1Q14722 419 aa12.61□□□□□ -0.39
LIG1-203ENST00000536218 ELOCQ15369 112 aa12.61□□□□□ -0.39
LIG1-203ENST00000536218 AWAT1Q58HT5 328 aa12.61□□□□□ -0.39
LIG1-203ENST00000536218 FHL5Q5TD97 284 aa12.61□□□□□ -0.39
LIG1-203ENST00000536218 CDRT4Q8N9R6 151 aa12.61□□□□□ -0.39
LIG1-203ENST00000536218 TEX19Q8NA77 164 aa12.61□□□□□ -0.39
LIG1-203ENST00000536218 ST7LQ8TDW4 575 aa12.61□□□□□ -0.39
LIG1-203ENST00000536218 ZNF350Q9GZX5 532 aa12.61□□□□□ -0.39
LIG1-203ENST00000536218 C7orf77A4D0Y5 90 aa12.6□□□□□ -0.39
LIG1-203ENST00000536218 TNRC18O15417 2968 aaPredicted RBP12.6□□□□□ -0.39
LIG1-203ENST00000536218 ZNF749O43361 778 aa12.6□□□□□ -0.39
LIG1-203ENST00000536218 SBK2P0C263 348 aa12.6□□□□□ -0.39
LIG1-203ENST00000536218 NAA10P41227 235 aaPredicted RBP12.6□□□□□ -0.39
LIG1-203ENST00000536218 MRPS10P82664 201 aaKnown RBP12.6□□□□□ -0.39
LIG1-203ENST00000536218 DHRS11Q6UWP2 260 aa12.6□□□□□ -0.39
LIG1-203ENST00000536218 ZNF619Q8N2I2 560 aa12.6□□□□□ -0.39
LIG1-203ENST00000536218 DPH1Q9BZG8 443 aa12.6□□□□□ -0.39
LIG1-203ENST00000536218 NRSN2Q9GZP1 204 aa12.6□□□□□ -0.39
LIG1-203ENST00000536218 V9GY05 133 aa12.6□□□□□ -0.39
LIG1-203ENST00000536218 ZNF208O43345 1280 aa12.6□□□□□ -0.39
LIG1-203ENST00000536218 ZNF217O75362 1048 aa12.6□□□□□ -0.39
LIG1-203ENST00000536218 EDN3P14138 238 aa12.6□□□□□ -0.39
LIG1-203ENST00000536218 MAOAP21397 527 aa12.6□□□□□ -0.39
LIG1-203ENST00000536218 RPS10P46783 165 aaKnown RBP12.6□□□□□ -0.39
LIG1-203ENST00000536218 RAB38P57729 211 aa12.6□□□□□ -0.39
LIG1-203ENST00000536218 MGAT2Q10469 447 aa12.6□□□□□ -0.39
LIG1-203ENST00000536218 SCGB2B2Q4G0G5 96 aa12.6□□□□□ -0.39
LIG1-203ENST00000536218 IL34Q6ZMJ4 242 aa12.6□□□□□ -0.39
LIG1-203ENST00000536218 SDR9C7Q8NEX9 313 aa12.6□□□□□ -0.39
LIG1-203ENST00000536218 OR52L1Q8NGH7 329 aa12.6□□□□□ -0.39
LIG1-203ENST00000536218 SECTM1Q8WVN6 248 aa12.6□□□□□ -0.39
LIG1-203ENST00000536218 GFI1Q99684 422 aa12.6□□□□□ -0.39
LIG1-203ENST00000536218 ST6GALNAC2Q9UJ37 374 aa12.6□□□□□ -0.39
LIG1-203ENST00000536218 VPS13AQ96RL7 3174 aa12.59□□□□□ -0.39
LIG1-203ENST00000536218 C13orf42A0A1B0GVH6 325 aa12.59□□□□□ -0.39
LIG1-203ENST00000536218 TGFBR3LH3BV60 316 aa12.59□□□□□ -0.39
LIG1-203ENST00000536218 IFNA17P01571 189 aa12.59□□□□□ -0.39
LIG1-203ENST00000536218 BMP7P18075 431 aa12.59□□□□□ -0.39
LIG1-203ENST00000536218 GSK3AP49840 483 aa12.59□□□□□ -0.39
LIG1-203ENST00000536218 ZNF136P52737 540 aa12.59□□□□□ -0.39
LIG1-203ENST00000536218 OR8G1Q15617 311 aa12.59□□□□□ -0.39
LIG1-203ENST00000536218 AMZ1Q400G9 498 aa12.59□□□□□ -0.39
LIG1-203ENST00000536218 TMEM244Q5VVB8 128 aa12.59□□□□□ -0.39
LIG1-203ENST00000536218 KCTD9Q7L273 389 aa12.59□□□□□ -0.39
LIG1-203ENST00000536218 OR5M8Q8NGP6 311 aa12.59□□□□□ -0.39
LIG1-203ENST00000536218 PFN4Q8NHR9 129 aa12.59□□□□□ -0.39
LIG1-203ENST00000536218 DCUN1D4Q92564 292 aa12.59□□□□□ -0.39
LIG1-203ENST00000536218 HAVCR1Q96D42 359 aa12.59□□□□□ -0.39
LIG1-203ENST00000536218 PIK3IP1Q96FE7 263 aa12.59□□□□□ -0.39
LIG1-203ENST00000536218 OR52D1Q9H346 318 aa12.59□□□□□ -0.39
LIG1-203ENST00000536218 IGHV5-51A0A0C4DH38 117 aa12.59□□□□□ -0.39
LIG1-203ENST00000536218 IFITM10A6NMD0 228 aa12.59□□□□□ -0.39
LIG1-203ENST00000536218 METTL12A8MUP2 240 aa12.59□□□□□ -0.39
LIG1-203ENST00000536218 M0QYG6 137 aa12.59□□□□□ -0.39
LIG1-203ENST00000536218 PMS2P2O95744 297 aa12.59□□□□□ -0.39
LIG1-203ENST00000536218 TXNDC12O95881 172 aa12.59□□□□□ -0.39
LIG1-203ENST00000536218 HLA-AP01891 365 aaKnown RBP12.59□□□□□ -0.39
LIG1-203ENST00000536218 SNRPCP09234 159 aaKnown RBP12.59□□□□□ -0.39
LIG1-203ENST00000536218 AKAIN1P0CW23 69 aa12.59□□□□□ -0.39
LIG1-203ENST00000536218 HIST1H1BP16401 226 aaKnown RBP12.59□□□□□ -0.39
LIG1-203ENST00000536218 CD27P26842 260 aa12.59□□□□□ -0.39
LIG1-203ENST00000536218 SOX2P48431 317 aa12.59□□□□□ -0.39
LIG1-203ENST00000536218 HGFACQ04756 655 aa12.59□□□□□ -0.39
LIG1-203ENST00000536218 DUSP8Q13202 625 aa12.59□□□□□ -0.39
LIG1-203ENST00000536218 ODF4Q2M2E3 257 aa12.59□□□□□ -0.39
LIG1-203ENST00000536218 CASTOR1Q8WTX7 329 aa12.59□□□□□ -0.39
LIG1-203ENST00000536218 SLC39A7Q92504 469 aa12.59□□□□□ -0.39
LIG1-203ENST00000536218 PTCHD1Q96NR3 888 aa12.59□□□□□ -0.39
LIG1-203ENST00000536218 TWSG1Q9GZX9 223 aa12.59□□□□□ -0.39
LIG1-203ENST00000536218 RGCCQ9H4X1 137 aa12.59□□□□□ -0.39
LIG1-203ENST00000536218 ANKRD10Q9NXR5 420 aa12.59□□□□□ -0.39
LIG1-203ENST00000536218 PCDH15Q96QU1 1955 aa12.59□□□□□ -0.39
LIG1-203ENST00000536218 A0A1W2PPE2 198 aa12.59□□□□□ -0.39
LIG1-203ENST00000536218 SLC22A31A6NKX4 558 aa12.59□□□□□ -0.39
LIG1-203ENST00000536218 FOXS1O43638 330 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms