RNA–Protein interactions for RNA: ENST00000535915.5

LDLR-203, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-203ENST00000535915 FAM198BQ6UWH4 519 aa11.77□□□□□ -0.53
LDLR-203ENST00000535915 NFAM1Q8NET5 270 aaPredicted RBP11.77□□□□□ -0.53
LDLR-203ENST00000535915 OR6M1Q8NGM8 313 aa11.77□□□□□ -0.53
LDLR-203ENST00000535915 OR5M1Q8NGP8 315 aa11.77□□□□□ -0.53
LDLR-203ENST00000535915 OR6S1Q8NH40 331 aa11.77□□□□□ -0.53
LDLR-203ENST00000535915 ST7LQ8TDW4 575 aa11.77□□□□□ -0.53
LDLR-203ENST00000535915 DNASE2BQ8WZ79 361 aa11.77□□□□□ -0.53
LDLR-203ENST00000535915 OR2A7Q96R45 310 aa11.77□□□□□ -0.53
LDLR-203ENST00000535915 KCNK17Q96T54 332 aa11.77□□□□□ -0.53
LDLR-203ENST00000535915 CHST11Q9NPF2 352 aa11.77□□□□□ -0.53
LDLR-203ENST00000535915 G6PC2Q9NQR9 355 aa11.77□□□□□ -0.53
LDLR-203ENST00000535915 KLRF1Q9NZS2 232 aa11.77□□□□□ -0.53
LDLR-203ENST00000535915 CACNA1EQ15878 2313 aa11.77□□□□□ -0.53
LDLR-203ENST00000535915 TRBV11-1A0A0K0K1C0 115 aa11.76□□□□□ -0.53
LDLR-203ENST00000535915 PLSCR5A0PG75 271 aa11.76□□□□□ -0.53
LDLR-203ENST00000535915 OR2M5A3KFT3 312 aa11.76□□□□□ -0.53
LDLR-203ENST00000535915 L7N2F9 121 aa11.76□□□□□ -0.53
LDLR-203ENST00000535915 SIX6O95475 246 aa11.76□□□□□ -0.53
LDLR-203ENST00000535915 HRGP04196 525 aa11.76□□□□□ -0.53
LDLR-203ENST00000535915 CXCL2P19875 107 aa11.76□□□□□ -0.53
LDLR-203ENST00000535915 ACHEP22303 614 aa11.76□□□□□ -0.53
LDLR-203ENST00000535915 OC90Q02509 493 aaPredicted RBP11.76□□□□□ -0.53
LDLR-203ENST00000535915 IKZF1Q13422 519 aa11.76□□□□□ -0.53
LDLR-203ENST00000535915 TOMM20Q15388 145 aa11.76□□□□□ -0.53
LDLR-203ENST00000535915 NKAIN1Q4KMZ8 207 aa11.76□□□□□ -0.53
LDLR-203ENST00000535915 COMMD7Q86VX2 200 aa11.76□□□□□ -0.53
LDLR-203ENST00000535915 CLEC1AQ8NC01 280 aa11.76□□□□□ -0.53
LDLR-203ENST00000535915 LILRB1Q8NHL6 650 aaPredicted RBP11.76□□□□□ -0.53
LDLR-203ENST00000535915 GPX8Q8TED1 209 aa11.76□□□□□ -0.53
LDLR-203ENST00000535915 OR6C1Q96RD1 312 aa11.76□□□□□ -0.53
LDLR-203ENST00000535915 EXO5Q9H790 373 aa11.76□□□□□ -0.53
LDLR-203ENST00000535915 TMEM138Q9NPI0 162 aa11.76□□□□□ -0.53
LDLR-203ENST00000535915 RPS10-NUDT3A0A1W2PQS6 291 aa11.76□□□□□ -0.53
LDLR-203ENST00000535915 MEGF11A6BM72 1044 aa11.76□□□□□ -0.53
LDLR-203ENST00000535915 LMX1BO60663 402 aa11.76□□□□□ -0.53
LDLR-203ENST00000535915 AQP8O94778 261 aa11.76□□□□□ -0.53
LDLR-203ENST00000535915 TIAF1O95411 115 aa11.76□□□□□ -0.53
LDLR-203ENST00000535915 H2BFMP0C1H6 154 aa11.76□□□□□ -0.53
LDLR-203ENST00000535915 NFYAP23511 347 aaPredicted RBP11.76□□□□□ -0.53
LDLR-203ENST00000535915 DHODHQ02127 395 aa11.76□□□□□ -0.53
LDLR-203ENST00000535915 SSBP1Q04837 148 aaKnown RBP11.76□□□□□ -0.53
LDLR-203ENST00000535915 CLLU1Q5K131 121 aa11.76□□□□□ -0.53
LDLR-203ENST00000535915 TMEM71Q6P5X7 295 aa11.76□□□□□ -0.53
LDLR-203ENST00000535915 PAPD4Q6PIY7 484 aaKnown RBP11.76□□□□□ -0.53
LDLR-203ENST00000535915 TMEM205Q6UW68 189 aa11.76□□□□□ -0.53
LDLR-203ENST00000535915 ZNF704Q6ZNC4 412 aaPredicted RBP11.76□□□□□ -0.53
LDLR-203ENST00000535915 RABEPKQ7Z6M1 372 aa11.76□□□□□ -0.53
LDLR-203ENST00000535915 ADGRE4PQ86SQ3 457 aa11.76□□□□□ -0.53
LDLR-203ENST00000535915 GABRG1Q8N1C3 465 aa11.76□□□□□ -0.53
LDLR-203ENST00000535915 MUC20Q8N307 709 aaPredicted RBP11.76□□□□□ -0.53
LDLR-203ENST00000535915 EMC6Q9BV81 110 aa11.76□□□□□ -0.53
LDLR-203ENST00000535915 AUP1Q9Y679 476 aa11.76□□□□□ -0.53
LDLR-203ENST00000535915 WDFY3Q8IZQ1 3526 aa11.76□□□□□ -0.53
LDLR-203ENST00000535915 EML6Q6ZMW3 1958 aa11.75□□□□□ -0.53
LDLR-203ENST00000535915 P2RY10O00398 339 aa11.75□□□□□ -0.53
LDLR-203ENST00000535915 ALOX12BO75342 701 aa11.75□□□□□ -0.53
LDLR-203ENST00000535915 ISG15P05161 165 aa11.75□□□□□ -0.53
LDLR-203ENST00000535915 LPLP06858 475 aa11.75□□□□□ -0.53
LDLR-203ENST00000535915 EIF1AXP47813 144 aaKnown RBP11.75□□□□□ -0.53
LDLR-203ENST00000535915 SUMO3P55854 103 aaPredicted RBP11.75□□□□□ -0.53
LDLR-203ENST00000535915 TAS2R19P59542 299 aa11.75□□□□□ -0.53
LDLR-203ENST00000535915 C2orf68Q2NKX9 166 aa11.75□□□□□ -0.53
LDLR-203ENST00000535915 C4orf46Q504U0 113 aa11.75□□□□□ -0.53
LDLR-203ENST00000535915 ZNF574Q6ZN55 896 aaPredicted RBP11.75□□□□□ -0.53
LDLR-203ENST00000535915 HDDC2Q7Z4H3 204 aa11.75□□□□□ -0.53
LDLR-203ENST00000535915 NUBPLQ8TB37 319 aa11.75□□□□□ -0.53
LDLR-203ENST00000535915 TNFAIP8L1Q8WVP5 186 aa11.75□□□□□ -0.53
LDLR-203ENST00000535915 SEH1LQ96EE3 360 aa11.75□□□□□ -0.53
LDLR-203ENST00000535915 ZMAT3Q9HA38 289 aaKnown RBP11.75□□□□□ -0.53
LDLR-203ENST00000535915 IGLV3-12A0A075B6K2 115 aa11.75□□□□□ -0.53
LDLR-203ENST00000535915 LOC101059948A0A1B0GTJ6 334 aa11.75□□□□□ -0.53
LDLR-203ENST00000535915 CPED1A4D0V7 1026 aa11.75□□□□□ -0.53
LDLR-203ENST00000535915 GOSR2O14653 212 aa11.75□□□□□ -0.53
LDLR-203ENST00000535915 BIDP55957 195 aa11.75□□□□□ -0.53
LDLR-203ENST00000535915 H2BFSP57053 126 aa11.75□□□□□ -0.53
LDLR-203ENST00000535915 PCK2Q16822 640 aa11.75□□□□□ -0.53
LDLR-203ENST00000535915 TMEM244Q5VVB8 128 aa11.75□□□□□ -0.53
LDLR-203ENST00000535915 OR10K2Q6IF99 312 aa11.75□□□□□ -0.53
LDLR-203ENST00000535915 SPEM1Q8N4L4 309 aa11.75□□□□□ -0.53
LDLR-203ENST00000535915 OR2AK2Q8NG84 335 aa11.75□□□□□ -0.53
LDLR-203ENST00000535915 OR10H5Q8NGA6 315 aa11.75□□□□□ -0.53
LDLR-203ENST00000535915 SFXN2Q96NB2 322 aa11.75□□□□□ -0.53
LDLR-203ENST00000535915 PPA2Q9H2U2 334 aa11.75□□□□□ -0.53
LDLR-203ENST00000535915 APMAPQ9HDC9 416 aa11.75□□□□□ -0.53
LDLR-203ENST00000535915 PPP4R1LQ9P1A2 415 aa11.75□□□□□ -0.53
LDLR-203ENST00000535915 SULT1C2O00338 296 aa11.74□□□□□ -0.53
LDLR-203ENST00000535915 TOR1AO14656 332 aa11.74□□□□□ -0.53
LDLR-203ENST00000535915 ZNF208O43345 1280 aa11.74□□□□□ -0.53
LDLR-203ENST00000535915 SCRG1O75711 98 aa11.74□□□□□ -0.53
LDLR-203ENST00000535915 RAB3DO95716 219 aa11.74□□□□□ -0.53
LDLR-203ENST00000535915 UBCP0CG48 685 aaKnown RBP11.74□□□□□ -0.53
LDLR-203ENST00000535915 GABRA1P14867 456 aa11.74□□□□□ -0.53
LDLR-203ENST00000535915 ZNF41P51814 821 aaPredicted RBP11.74□□□□□ -0.53
LDLR-203ENST00000535915 ACY1Q03154 408 aa11.74□□□□□ -0.53
LDLR-203ENST00000535915 DEGS2Q6QHC5 323 aa11.74□□□□□ -0.53
LDLR-203ENST00000535915 PNPLA2Q96AD5 504 aa11.74□□□□□ -0.53
LDLR-203ENST00000535915 POTEKPQ9BYX7 375 aa11.74□□□□□ -0.53
LDLR-203ENST00000535915 CHST6Q9GZX3 395 aa11.74□□□□□ -0.53
LDLR-203ENST00000535915 OPN4Q9UHM6 478 aa11.74□□□□□ -0.53
LDLR-203ENST00000535915 LIPT2A6NK58 231 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms