RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 SLC25A28Q96A46 364 aa9.41□□□□□ -0.9
CLSTN3-206ENST00000535668 RASD2Q96D21 266 aa9.41□□□□□ -0.9
CLSTN3-206ENST00000535668 THOC1Q96FV9 657 aaKnown RBP9.41□□□□□ -0.9
CLSTN3-206ENST00000535668 ZNF48Q96MX3 618 aaPredicted RBP9.41□□□□□ -0.9
CLSTN3-206ENST00000535668 OR51B6Q9H340 312 aa9.41□□□□□ -0.9
CLSTN3-206ENST00000535668 TMEM165Q9HC07 324 aa9.41□□□□□ -0.9
CLSTN3-206ENST00000535668 MSL2Q9HCI7 577 aa9.41□□□□□ -0.9
CLSTN3-206ENST00000535668 EGFL7Q9UHF1 273 aa9.41□□□□□ -0.9
CLSTN3-206ENST00000535668 PPP1R3CQ9UQK1 317 aa9.41□□□□□ -0.9
CLSTN3-206ENST00000535668 TEX13CA0A0J9YWL9 993 aa9.4□□□□□ -0.9
CLSTN3-206ENST00000535668 PRSS37A4D1T9 235 aa9.4□□□□□ -0.9
CLSTN3-206ENST00000535668 HMGB1P1B2RPK0 211 aaPredicted RBP9.4□□□□□ -0.9
CLSTN3-206ENST00000535668 FFAR1O14842 300 aa9.4□□□□□ -0.9
CLSTN3-206ENST00000535668 SLC22A2O15244 555 aa9.4□□□□□ -0.9
CLSTN3-206ENST00000535668 PTP4A3O75365 173 aa9.4□□□□□ -0.9
CLSTN3-206ENST00000535668 ABHD16AO95870 558 aa9.4□□□□□ -0.9
CLSTN3-206ENST00000535668 SCG5P05408 212 aa9.4□□□□□ -0.9
CLSTN3-206ENST00000535668 CD14P08571 375 aa9.4□□□□□ -0.9
CLSTN3-206ENST00000535668 CCNOP22674 350 aa9.4□□□□□ -0.9
CLSTN3-206ENST00000535668 IFNA8P32881 189 aa9.4□□□□□ -0.9
CLSTN3-206ENST00000535668 CTXN1P60606 82 aa9.4□□□□□ -0.9
CLSTN3-206ENST00000535668 GLO1Q04760 184 aa9.4□□□□□ -0.9
CLSTN3-206ENST00000535668 SLC9A3R2Q15599 337 aa9.4□□□□□ -0.9
CLSTN3-206ENST00000535668 CYBRD1Q53TN4 286 aa9.4□□□□□ -0.9
CLSTN3-206ENST00000535668 SPATA46Q5T0L3 261 aa9.4□□□□□ -0.9
CLSTN3-206ENST00000535668 TREML4Q6UXN2 200 aa9.4□□□□□ -0.9
CLSTN3-206ENST00000535668 Q8TCH9 128 aa9.4□□□□□ -0.9
CLSTN3-206ENST00000535668 ACOT11Q8WXI4 607 aaPredicted RBP9.4□□□□□ -0.9
CLSTN3-206ENST00000535668 DMRTB1Q96MA1 342 aa9.4□□□□□ -0.9
CLSTN3-206ENST00000535668 ECSITQ9BQ95 431 aa9.4□□□□□ -0.9
CLSTN3-206ENST00000535668 MRI1Q9BV20 369 aa9.4□□□□□ -0.9
CLSTN3-206ENST00000535668 DCAF16Q9NXF7 216 aa9.4□□□□□ -0.9
CLSTN3-206ENST00000535668 VSX1Q9NZR4 365 aaPredicted RBP9.4□□□□□ -0.9
CLSTN3-206ENST00000535668 MIOXQ9UGB7 285 aa9.4□□□□□ -0.9
CLSTN3-206ENST00000535668 CEACAM18A8MTB9 384 aa9.39□□□□□ -0.91
CLSTN3-206ENST00000535668 FAM220BPB1ANY3 271 aa9.39□□□□□ -0.91
CLSTN3-206ENST00000535668 SGCEO43556 437 aa9.39□□□□□ -0.91
CLSTN3-206ENST00000535668 TIMM8AO60220 97 aaPredicted RBP9.39□□□□□ -0.91
CLSTN3-206ENST00000535668 TXNDC12O95881 172 aa9.39□□□□□ -0.91
CLSTN3-206ENST00000535668 SBK2P0C263 348 aa9.39□□□□□ -0.91
CLSTN3-206ENST00000535668 IFI30P13284 250 aa9.39□□□□□ -0.91
CLSTN3-206ENST00000535668 ZNF26P17031 533 aaPredicted RBP9.39□□□□□ -0.91
CLSTN3-206ENST00000535668 MMP16P51512 607 aa9.39□□□□□ -0.91
CLSTN3-206ENST00000535668 GUCY1A3Q02108 690 aa9.39□□□□□ -0.91
CLSTN3-206ENST00000535668 PDLIM3Q53GG5 364 aaPredicted RBP9.39□□□□□ -0.91
CLSTN3-206ENST00000535668 ESCO2Q56NI9 601 aa9.39□□□□□ -0.91
CLSTN3-206ENST00000535668 TTMPQ5BVD1 217 aa9.39□□□□□ -0.91
CLSTN3-206ENST00000535668 ARMCX4Q5H9R4 360 aa9.39□□□□□ -0.91
CLSTN3-206ENST00000535668 GPR139Q6DWJ6 353 aa9.39□□□□□ -0.91
CLSTN3-206ENST00000535668 PGM2L1Q6PCE3 622 aa9.39□□□□□ -0.91
CLSTN3-206ENST00000535668 C16orf87Q6PH81 154 aa9.39□□□□□ -0.91
CLSTN3-206ENST00000535668 MBOAT2Q6ZWT7 520 aa9.39□□□□□ -0.91
CLSTN3-206ENST00000535668 ADCK1Q86TW2 530 aa9.39□□□□□ -0.91
CLSTN3-206ENST00000535668 OAFQ86UD1 273 aa9.39□□□□□ -0.91
CLSTN3-206ENST00000535668 CLDN22Q8N7P3 220 aa9.39□□□□□ -0.91
CLSTN3-206ENST00000535668 ICA1LQ8NDH6 482 aa9.39□□□□□ -0.91
CLSTN3-206ENST00000535668 OR8G5Q8NG78 346 aa9.39□□□□□ -0.91
CLSTN3-206ENST00000535668 OR13G1Q8NGZ3 307 aa9.39□□□□□ -0.91
CLSTN3-206ENST00000535668 RAB40AQ8WXH6 277 aa9.39□□□□□ -0.91
CLSTN3-206ENST00000535668 NSMAFQ92636 917 aa9.39□□□□□ -0.91
CLSTN3-206ENST00000535668 CMBLQ96DG6 245 aa9.39□□□□□ -0.91
CLSTN3-206ENST00000535668 SLC30A2Q9BRI3 323 aa9.39□□□□□ -0.91
CLSTN3-206ENST00000535668 NMNAT1Q9HAN9 279 aaPredicted RBP9.39□□□□□ -0.91
CLSTN3-206ENST00000535668 NOX4Q9NPH5 578 aa9.39□□□□□ -0.91
CLSTN3-206ENST00000535668 NRIP3Q9NQ35 241 aa9.39□□□□□ -0.91
CLSTN3-206ENST00000535668 INTS9Q9NV88 658 aaKnown RBP9.39□□□□□ -0.91
CLSTN3-206ENST00000535668 STARD10Q9Y365 291 aa9.39□□□□□ -0.91
CLSTN3-206ENST00000535668 PPIAL4AQ9Y536 164 aa9.39□□□□□ -0.91
CLSTN3-206ENST00000535668 CMYA5Q8N3K9 4069 aa9.39□□□□□ -0.91
CLSTN3-206ENST00000535668 A0A087WUU8 490 aa9.38□□□□□ -0.91
CLSTN3-206ENST00000535668 IGHV2-70DA0A0C4DH43 119 aa9.38□□□□□ -0.91
CLSTN3-206ENST00000535668 A0A1W2PRQ8 180 aa9.38□□□□□ -0.91
CLSTN3-206ENST00000535668 IQCF6A8MYZ5 107 aa9.38□□□□□ -0.91
CLSTN3-206ENST00000535668 PHYHO14832 338 aa9.38□□□□□ -0.91
CLSTN3-206ENST00000535668 RGS9O75916 674 aaPredicted RBP9.38□□□□□ -0.91
CLSTN3-206ENST00000535668 NDUFA7O95182 113 aa9.38□□□□□ -0.91
CLSTN3-206ENST00000535668 CTLA4P16410 223 aa9.38□□□□□ -0.91
CLSTN3-206ENST00000535668 PSMB10P40306 273 aa9.38□□□□□ -0.91
CLSTN3-206ENST00000535668 OR1E2P47887 323 aa9.38□□□□□ -0.91
CLSTN3-206ENST00000535668 SEC61A1P61619 476 aaKnown RBP9.38□□□□□ -0.91
CLSTN3-206ENST00000535668 BAMBIQ13145 260 aa9.38□□□□□ -0.91
CLSTN3-206ENST00000535668 DGCR6Q14129 220 aa9.38□□□□□ -0.91
CLSTN3-206ENST00000535668 TRAM2Q15035 370 aa9.38□□□□□ -0.91
CLSTN3-206ENST00000535668 RSPO1Q2MKA7 263 aaPredicted RBP9.38□□□□□ -0.91
CLSTN3-206ENST00000535668 ZNF404Q494X3 552 aa9.38□□□□□ -0.91
CLSTN3-206ENST00000535668 ZBED5Q49AG3 693 aa9.38□□□□□ -0.91
CLSTN3-206ENST00000535668 MESTQ5EB52 335 aa9.38□□□□□ -0.91
CLSTN3-206ENST00000535668 GLB1L2Q8IW92 636 aa9.38□□□□□ -0.91
CLSTN3-206ENST00000535668 NRMQ8IXM6 262 aa9.38□□□□□ -0.91
CLSTN3-206ENST00000535668 BCL6BQ8N143 479 aaPredicted RBP9.38□□□□□ -0.91
CLSTN3-206ENST00000535668 POU5F2Q8N7G0 328 aa9.38□□□□□ -0.91
CLSTN3-206ENST00000535668 PLPP7Q8NBV4 271 aa9.38□□□□□ -0.91
CLSTN3-206ENST00000535668 OR52E2Q8NGJ4 325 aa9.38□□□□□ -0.91
CLSTN3-206ENST00000535668 OR5L1Q8NGL2 311 aa9.38□□□□□ -0.91
CLSTN3-206ENST00000535668 OR1F12Q8NHA8 337 aa9.38□□□□□ -0.91
CLSTN3-206ENST00000535668 LZICQ8WZA0 190 aa9.38□□□□□ -0.91
CLSTN3-206ENST00000535668 APOBEC3DQ96AK3 386 aaPredicted RBP9.38□□□□□ -0.91
CLSTN3-206ENST00000535668 OR2V2Q96R30 315 aa9.38□□□□□ -0.91
CLSTN3-206ENST00000535668 COQ7Q99807 217 aa9.38□□□□□ -0.91
CLSTN3-206ENST00000535668 UNKLQ9H9P5 680 aaKnown RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms