RNA–Protein interactions for RNA: ENST00000535479.5

LPCAT3-203, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 2,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-203ENST00000535479 ZBTB8AQ96BR9 441 aa12.46□□□□□ -0.41
LPCAT3-203ENST00000535479 G6PC3Q9BUM1 346 aa12.46□□□□□ -0.41
LPCAT3-203ENST00000535479 CNTD2Q9H8S5 307 aa12.46□□□□□ -0.41
LPCAT3-203ENST00000535479 PLCL2Q9UPR0 1127 aa12.46□□□□□ -0.41
LPCAT3-203ENST00000535479 LINC01387J3KSC0 135 aa12.46□□□□□ -0.42
LPCAT3-203ENST00000535479 ZNF354AO60765 605 aaPredicted RBP12.46□□□□□ -0.42
LPCAT3-203ENST00000535479 AK1P00568 194 aa12.46□□□□□ -0.42
LPCAT3-203ENST00000535479 ABOP16442 354 aa12.46□□□□□ -0.42
LPCAT3-203ENST00000535479 SPINK2P20155 84 aa12.46□□□□□ -0.42
LPCAT3-203ENST00000535479 GMFBP60983 142 aa12.46□□□□□ -0.42
LPCAT3-203ENST00000535479 MCHR2Q969V1 340 aa12.46□□□□□ -0.42
LPCAT3-203ENST00000535479 ZNF775Q96BV0 537 aaPredicted RBP12.46□□□□□ -0.42
LPCAT3-203ENST00000535479 NUDT9Q9BW91 350 aa12.46□□□□□ -0.42
LPCAT3-203ENST00000535479 SEC61A2Q9H9S3 476 aa12.46□□□□□ -0.42
LPCAT3-203ENST00000535479 THADAQ6YHU6 1953 aa12.45□□□□□ -0.42
LPCAT3-203ENST00000535479 KANTRA0A1W2PQU2 76 aa12.45□□□□□ -0.42
LPCAT3-203ENST00000535479 MSGN1A6NI15 193 aa12.45□□□□□ -0.42
LPCAT3-203ENST00000535479 B3GALNT1O75752 331 aa12.45□□□□□ -0.42
LPCAT3-203ENST00000535479 ERCC1P07992 297 aaPredicted RBP12.45□□□□□ -0.42
LPCAT3-203ENST00000535479 GABRG2P18507 467 aa12.45□□□□□ -0.42
LPCAT3-203ENST00000535479 IL12BP29460 328 aa12.45□□□□□ -0.42
LPCAT3-203ENST00000535479 IL13RA1P78552 427 aa12.45□□□□□ -0.42
LPCAT3-203ENST00000535479 EEF1A1P5Q5VTE0 462 aa12.45□□□□□ -0.42
LPCAT3-203ENST00000535479 TFAP2EQ6VUC0 442 aa12.45□□□□□ -0.42
LPCAT3-203ENST00000535479 HDDC2Q7Z4H3 204 aa12.45□□□□□ -0.42
LPCAT3-203ENST00000535479 SP7Q8TDD2 431 aaPredicted RBP12.45□□□□□ -0.42
LPCAT3-203ENST00000535479 LMX1AQ8TE12 382 aa12.45□□□□□ -0.42
LPCAT3-203ENST00000535479 TBL1XR1Q9BZK7 514 aa12.45□□□□□ -0.42
LPCAT3-203ENST00000535479 SMIM3Q9BZL3 60 aa12.45□□□□□ -0.42
LPCAT3-203ENST00000535479 HRH4Q9H3N8 390 aa12.45□□□□□ -0.42
LPCAT3-203ENST00000535479 UBQLN4Q9NRR5 601 aa12.45□□□□□ -0.42
LPCAT3-203ENST00000535479 RABL2BQ9UNT1 228 aa12.45□□□□□ -0.42
LPCAT3-203ENST00000535479 TRBV5-7A0A0A0MS05 114 aa12.45□□□□□ -0.42
LPCAT3-203ENST00000535479 TMEM269A0A1B0GVZ9 245 aa12.45□□□□□ -0.42
LPCAT3-203ENST00000535479 RNF222A6NCQ9 220 aa12.45□□□□□ -0.42
LPCAT3-203ENST00000535479 EFCAB7A8K855 629 aa12.45□□□□□ -0.42
LPCAT3-203ENST00000535479 SNRPGP15A8MWD9 76 aa12.45□□□□□ -0.42
LPCAT3-203ENST00000535479 DISC1C4P0D8 188 aa12.45□□□□□ -0.42
LPCAT3-203ENST00000535479 SEMA4FO95754 770 aa12.45□□□□□ -0.42
LPCAT3-203ENST00000535479 ADCYAP1P18509 176 aa12.45□□□□□ -0.42
LPCAT3-203ENST00000535479 MAPK3P27361 379 aaPredicted RBP12.45□□□□□ -0.42
LPCAT3-203ENST00000535479 JMJD6Q6NYC1 403 aaPredicted RBP12.45□□□□□ -0.42
LPCAT3-203ENST00000535479 SCARF2Q96GP6 870 aaPredicted RBP12.45□□□□□ -0.42
LPCAT3-203ENST00000535479 TSNAXQ99598 290 aaKnown RBP12.45□□□□□ -0.42
LPCAT3-203ENST00000535479 FN3KRPQ9HA64 309 aa12.45□□□□□ -0.42
LPCAT3-203ENST00000535479 HPF1Q9NWY4 346 aa12.45□□□□□ -0.42
LPCAT3-203ENST00000535479 TMEM212A6NML5 194 aa12.44□□□□□ -0.42
LPCAT3-203ENST00000535479 SULT1C2O00338 296 aa12.44□□□□□ -0.42
LPCAT3-203ENST00000535479 SLC33A1O00400 549 aaPredicted RBP12.44□□□□□ -0.42
LPCAT3-203ENST00000535479 IL5P05113 134 aa12.44□□□□□ -0.42
LPCAT3-203ENST00000535479 PSMD4P55036 377 aaKnown RBP12.44□□□□□ -0.42
LPCAT3-203ENST00000535479 POU3F1Q03052 451 aaPredicted RBP12.44□□□□□ -0.42
LPCAT3-203ENST00000535479 NSDHLQ15738 373 aa12.44□□□□□ -0.42
LPCAT3-203ENST00000535479 PRTGQ2VWP7 1150 aa12.44□□□□□ -0.42
LPCAT3-203ENST00000535479 SLC35D3Q5M8T2 416 aa12.44□□□□□ -0.42
LPCAT3-203ENST00000535479 MANEAQ5SRI9 462 aa12.44□□□□□ -0.42
LPCAT3-203ENST00000535479 ZNF584Q8IVC4 421 aa12.44□□□□□ -0.42
LPCAT3-203ENST00000535479 ZNF101Q8IZC7 436 aa12.44□□□□□ -0.42
LPCAT3-203ENST00000535479 PUSL1Q8N0Z8 303 aaKnown RBP12.44□□□□□ -0.42
LPCAT3-203ENST00000535479 PNLDC1Q8NA58 520 aaKnown RBP12.44□□□□□ -0.42
LPCAT3-203ENST00000535479 TMEM104Q8NE00 496 aa12.44□□□□□ -0.42
LPCAT3-203ENST00000535479 OR8B4Q96RC9 309 aa12.44□□□□□ -0.42
LPCAT3-203ENST00000535479 GMEB2Q9UKD1 530 aa12.44□□□□□ -0.42
LPCAT3-203ENST00000535479 ABCD4O14678 606 aa12.44□□□□□ -0.42
LPCAT3-203ENST00000535479 SRPX2O60687 465 aaPredicted RBP12.44□□□□□ -0.42
LPCAT3-203ENST00000535479 ACTL6AO96019 429 aa12.44□□□□□ -0.42
LPCAT3-203ENST00000535479 CSF2RBP32927 897 aa12.44□□□□□ -0.42
LPCAT3-203ENST00000535479 SLC37A1P57057 533 aa12.44□□□□□ -0.42
LPCAT3-203ENST00000535479 FZD2Q14332 565 aa12.44□□□□□ -0.42
LPCAT3-203ENST00000535479 PAPD4Q6PIY7 484 aaKnown RBP12.44□□□□□ -0.42
LPCAT3-203ENST00000535479 ZNF595Q8IYB9 648 aa12.44□□□□□ -0.42
LPCAT3-203ENST00000535479 NUBPLQ8TB37 319 aa12.44□□□□□ -0.42
LPCAT3-203ENST00000535479 GPX8Q8TED1 209 aa12.44□□□□□ -0.42
LPCAT3-203ENST00000535479 DCUN1D4Q92564 292 aa12.44□□□□□ -0.42
LPCAT3-203ENST00000535479 ADAT3Q96EY9 351 aaPredicted RBP12.44□□□□□ -0.42
LPCAT3-203ENST00000535479 RRNAD1Q96FB5 475 aaKnown RBP12.44□□□□□ -0.42
LPCAT3-203ENST00000535479 FAM71F1Q96KD3 344 aaPredicted RBP12.44□□□□□ -0.42
LPCAT3-203ENST00000535479 ZNF416Q9BWM5 594 aa12.44□□□□□ -0.42
LPCAT3-203ENST00000535479 NKX2-4Q9H2Z4 354 aa12.44□□□□□ -0.42
LPCAT3-203ENST00000535479 TREM1Q9NP99 234 aa12.44□□□□□ -0.42
LPCAT3-203ENST00000535479 ACKR4Q9NPB9 350 aa12.44□□□□□ -0.42
LPCAT3-203ENST00000535479 VSX1Q9NZR4 365 aaPredicted RBP12.44□□□□□ -0.42
LPCAT3-203ENST00000535479 COMMD9Q9P000 198 aa12.44□□□□□ -0.42
LPCAT3-203ENST00000535479 RABL2AQ9UBK7 228 aaPredicted RBP12.44□□□□□ -0.42
LPCAT3-203ENST00000535479 PRSS37A4D1T9 235 aa12.44□□□□□ -0.42
LPCAT3-203ENST00000535479 SLC17A2O00624 439 aa12.44□□□□□ -0.42
LPCAT3-203ENST00000535479 ADAM10O14672 748 aa12.44□□□□□ -0.42
LPCAT3-203ENST00000535479 IGHV4-34P06331 123 aa12.44□□□□□ -0.42
LPCAT3-203ENST00000535479 RCC1P18754 421 aaPredicted RBP12.44□□□□□ -0.42
LPCAT3-203ENST00000535479 OR51F2Q8NH61 342 aa12.44□□□□□ -0.42
LPCAT3-203ENST00000535479 MARVELD3Q96A59 401 aa12.44□□□□□ -0.42
LPCAT3-203ENST00000535479 CMSS1Q9BQ75 279 aaKnown RBP12.44□□□□□ -0.42
LPCAT3-203ENST00000535479 LRRC61Q9BV99 259 aa12.44□□□□□ -0.42
LPCAT3-203ENST00000535479 NKX6-2Q9C056 277 aaPredicted RBP12.44□□□□□ -0.42
LPCAT3-203ENST00000535479 CSAG2Q9Y5P2 127 aa12.44□□□□□ -0.42
LPCAT3-203ENST00000535479 RNF215Q9Y6U7 377 aa12.44□□□□□ -0.42
LPCAT3-203ENST00000535479 RFPL4AA6NLU0 287 aa12.43□□□□□ -0.42
LPCAT3-203ENST00000535479 RFPL4AL1F8VTS6 287 aa12.43□□□□□ -0.42
LPCAT3-203ENST00000535479 AKT2P31751 481 aa12.43□□□□□ -0.42
LPCAT3-203ENST00000535479 MFAP5Q13361 173 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms