RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 RPF2Q9H7B2 306 aaKnown RBP2.64□□□□□ -1.99
PRKDC-205ENST00000535375 HRASLS2Q9NWW9 162 aa2.64□□□□□ -1.99
PRKDC-205ENST00000535375 PEF1Q9UBV8 284 aaKnown RBP2.64□□□□□ -1.99
PRKDC-205ENST00000535375 MARCOQ9UEW3 520 aaPredicted RBP2.64□□□□□ -1.99
PRKDC-205ENST00000535375 GGA2Q9UJY4 613 aa2.64□□□□□ -1.99
PRKDC-205ENST00000535375 GOLT1BQ9Y3E0 138 aa2.64□□□□□ -1.99
PRKDC-205ENST00000535375 SMCO2A6NFE2 343 aa2.63□□□□□ -1.99
PRKDC-205ENST00000535375 ZNF705GA8MUZ8 300 aaPredicted RBP2.63□□□□□ -1.99
PRKDC-205ENST00000535375 HIDE1A8MVS5 230 aa2.63□□□□□ -1.99
PRKDC-205ENST00000535375 SUPT3HB4E1H0 165 aa2.63□□□□□ -1.99
PRKDC-205ENST00000535375 F6UB75 175 aa2.63□□□□□ -1.99
PRKDC-205ENST00000535375 GOLGA8TH3BQL2 631 aa2.63□□□□□ -1.99
PRKDC-205ENST00000535375 AKR7A2O43488 359 aa2.63□□□□□ -1.99
PRKDC-205ENST00000535375 DPM1O60762 260 aa2.63□□□□□ -1.99
PRKDC-205ENST00000535375 CLDN11O75508 207 aa2.63□□□□□ -1.99
PRKDC-205ENST00000535375 SRP72O76094 671 aaKnown RBP2.63□□□□□ -1.99
PRKDC-205ENST00000535375 AIFM1O95831 613 aa2.63□□□□□ -1.99
PRKDC-205ENST00000535375 CT45A6P0DMU7 189 aa2.63□□□□□ -1.99
PRKDC-205ENST00000535375 CT45A5P0DMU8 189 aa2.63□□□□□ -1.99
PRKDC-205ENST00000535375 CT45A7P0DMV0 189 aa2.63□□□□□ -1.99
PRKDC-205ENST00000535375 PRPS2P11908 318 aa2.63□□□□□ -1.99
PRKDC-205ENST00000535375 CLDN18P56856 261 aa2.63□□□□□ -1.99
PRKDC-205ENST00000535375 NUTF2P61970 127 aaKnown RBP2.63□□□□□ -1.99
PRKDC-205ENST00000535375 RAP1AP62834 184 aa2.63□□□□□ -1.99
PRKDC-205ENST00000535375 MXD1Q05195 221 aa2.63□□□□□ -1.99
PRKDC-205ENST00000535375 ECH1Q13011 328 aa2.63□□□□□ -1.99
PRKDC-205ENST00000535375 PRPSAP1Q14558 356 aa2.63□□□□□ -1.99
PRKDC-205ENST00000535375 CLINT1Q14677 625 aa2.63□□□□□ -1.99
PRKDC-205ENST00000535375 PON3Q15166 354 aa2.63□□□□□ -1.99
PRKDC-205ENST00000535375 SF3A2Q15428 464 aaKnown RBP2.63□□□□□ -1.99
PRKDC-205ENST00000535375 PRSS8Q16651 343 aa2.63□□□□□ -1.99
PRKDC-205ENST00000535375 KLHL40Q2TBA0 621 aa2.63□□□□□ -1.99
PRKDC-205ENST00000535375 CT45A1Q5HYN5 189 aa2.63□□□□□ -1.99
PRKDC-205ENST00000535375 PIP5KL1Q5T9C9 394 aa2.63□□□□□ -1.99
PRKDC-205ENST00000535375 STUMQ69YW2 141 aa2.63□□□□□ -1.99
PRKDC-205ENST00000535375 DUX4L9Q6RFH8 374 aaPredicted RBP2.63□□□□□ -1.99
PRKDC-205ENST00000535375 TMEM179Q6ZVK1 233 aa2.63□□□□□ -1.99
PRKDC-205ENST00000535375 MREGQ8N565 214 aa2.63□□□□□ -1.99
PRKDC-205ENST00000535375 OR10G4Q8NGN3 311 aa2.63□□□□□ -1.99
PRKDC-205ENST00000535375 OR2A1Q8NGT9 310 aa2.63□□□□□ -1.99
PRKDC-205ENST00000535375 OR5B3Q8NH48 314 aa2.63□□□□□ -1.99
PRKDC-205ENST00000535375 OR52E5Q8NH55 327 aa2.63□□□□□ -1.99
PRKDC-205ENST00000535375 CT45A3Q8NHU0 189 aa2.63□□□□□ -1.99
PRKDC-205ENST00000535375 LYPD6BQ8NI32 183 aa2.63□□□□□ -1.99
PRKDC-205ENST00000535375 ZNF461Q8TAF7 563 aa2.63□□□□□ -1.99
PRKDC-205ENST00000535375 ISG20Q96AZ6 181 aaKnown RBP2.63□□□□□ -1.99
PRKDC-205ENST00000535375 PDXPQ96GD0 296 aa2.63□□□□□ -1.99
PRKDC-205ENST00000535375 PRRC1Q96M27 445 aa2.63□□□□□ -1.99
PRKDC-205ENST00000535375 GSDMAQ96QA5 445 aa2.63□□□□□ -1.99
PRKDC-205ENST00000535375 CCDC59Q9P031 241 aaKnown RBP2.63□□□□□ -1.99
PRKDC-205ENST00000535375 KCNE3Q9Y6H6 103 aa2.63□□□□□ -1.99
PRKDC-205ENST00000535375 CENPJQ9HC77 1338 aaPredicted RBP2.63□□□□□ -1.99
PRKDC-205ENST00000535375 MAPK8IP3Q9UPT6 1336 aa2.63□□□□□ -1.99
PRKDC-205ENST00000535375 CD160O95971 181 aa2.62□□□□□ -1.99
PRKDC-205ENST00000535375 ADRA2AP08913 450 aa2.62□□□□□ -1.99
PRKDC-205ENST00000535375 ACSM4P0C7M7 580 aa2.62□□□□□ -1.99
PRKDC-205ENST00000535375 RALBP11234 206 aa2.62□□□□□ -1.99
PRKDC-205ENST00000535375 CTRB1P17538 263 aa2.62□□□□□ -1.99
PRKDC-205ENST00000535375 TRAM2Q15035 370 aa2.62□□□□□ -1.99
PRKDC-205ENST00000535375 PRR9Q5T870 116 aa2.62□□□□□ -1.99
PRKDC-205ENST00000535375 HES5Q5TA89 166 aa2.62□□□□□ -1.99
PRKDC-205ENST00000535375 TWF2Q6IBS0 349 aaKnown RBP2.62□□□□□ -1.99
PRKDC-205ENST00000535375 TTC23LQ6PF05 361 aa2.62□□□□□ -1.99
PRKDC-205ENST00000535375 TEX43Q6ZNM6 134 aa2.62□□□□□ -1.99
PRKDC-205ENST00000535375 HDDC2Q7Z4H3 204 aa2.62□□□□□ -1.99
PRKDC-205ENST00000535375 APRG1Q8IVJ8 170 aa2.62□□□□□ -1.99
PRKDC-205ENST00000535375 MICU2Q8IYU8 434 aa2.62□□□□□ -1.99
PRKDC-205ENST00000535375 OR9G4Q8NGQ1 327 aa2.62□□□□□ -1.99
PRKDC-205ENST00000535375 OR10J6PQ8NGY7 276 aa2.62□□□□□ -1.99
PRKDC-205ENST00000535375 OR5K2Q8NHB8 316 aa2.62□□□□□ -1.99
PRKDC-205ENST00000535375 SEH1LQ96EE3 360 aa2.62□□□□□ -1.99
PRKDC-205ENST00000535375 SERPINB12Q96P63 405 aa2.62□□□□□ -1.99
PRKDC-205ENST00000535375 OSBPL11Q9BXB4 747 aa2.62□□□□□ -1.99
PRKDC-205ENST00000535375 ACTR3CQ9C0K3 210 aaPredicted RBP2.62□□□□□ -1.99
PRKDC-205ENST00000535375 IQCGQ9H095 443 aaKnown RBP2.62□□□□□ -1.99
PRKDC-205ENST00000535375 ZNF355PQ9NSJ1 428 aa2.62□□□□□ -1.99
PRKDC-205ENST00000535375 AHSPQ9NZD4 102 aa2.62□□□□□ -1.99
PRKDC-205ENST00000535375 CHTOPQ9Y3Y2 248 aaKnown RBP2.62□□□□□ -1.99
PRKDC-205ENST00000535375 LYRM9A8MSI8 78 aa2.61□□□□□ -1.99
PRKDC-205ENST00000535375 TEX46H3BTG2 121 aa2.61□□□□□ -1.99
PRKDC-205ENST00000535375 K7EMT4 169 aa2.61□□□□□ -1.99
PRKDC-205ENST00000535375 HMOX2P30519 316 aa2.61□□□□□ -1.99
PRKDC-205ENST00000535375 CCT6AP40227 531 aaKnown RBP2.61□□□□□ -1.99
PRKDC-205ENST00000535375 TNFSF9P41273 254 aa2.61□□□□□ -1.99
PRKDC-205ENST00000535375 MAGEA1P43355 309 aa2.61□□□□□ -1.99
PRKDC-205ENST00000535375 OR1G1P47890 313 aa2.61□□□□□ -1.99
PRKDC-205ENST00000535375 SLC11A1P49279 550 aa2.61□□□□□ -1.99
PRKDC-205ENST00000535375 SLC7A9P82251 487 aa2.61□□□□□ -1.99
PRKDC-205ENST00000535375 SP4Q02446 784 aa2.61□□□□□ -1.99
PRKDC-205ENST00000535375 TWF1Q12792 350 aa2.61□□□□□ -1.99
PRKDC-205ENST00000535375 OR7A5Q15622 319 aa2.61□□□□□ -1.99
PRKDC-205ENST00000535375 KRTAP13-2Q52LG2 175 aa2.61□□□□□ -1.99
PRKDC-205ENST00000535375 BEX5Q5H9J7 111 aa2.61□□□□□ -1.99
PRKDC-205ENST00000535375 ANKRD22Q5VYY1 191 aa2.61□□□□□ -1.99
PRKDC-205ENST00000535375 SPESP1Q6UW49 350 aa2.61□□□□□ -1.99
PRKDC-205ENST00000535375 STRADAQ7RTN6 431 aa2.61□□□□□ -1.99
PRKDC-205ENST00000535375 CMC1Q7Z7K0 106 aa2.61□□□□□ -1.99
PRKDC-205ENST00000535375 TMEM150AQ86TG1 271 aa2.61□□□□□ -1.99
PRKDC-205ENST00000535375 JAGN1Q8N5M9 183 aa2.61□□□□□ -1.99
PRKDC-205ENST00000535375 C15orf56Q8N910 161 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms