RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 ZNF771Q7L3S4 317 aaPredicted RBP7.54□□□□□ -1.2
COPB1-211ENST00000534234 VASH1Q7L8A9 365 aaPredicted RBP7.54□□□□□ -1.2
COPB1-211ENST00000534234 GLB1L2Q8IW92 636 aa7.54□□□□□ -1.2
COPB1-211ENST00000534234 FAM86B1Q8N7N1 296 aa7.54□□□□□ -1.2
COPB1-211ENST00000534234 NPEPL1Q8NDH3 523 aa7.54□□□□□ -1.2
COPB1-211ENST00000534234 OR4M2Q8NGB6 313 aa7.54□□□□□ -1.2
COPB1-211ENST00000534234 ZNF418Q8TF45 676 aaPredicted RBP7.54□□□□□ -1.2
COPB1-211ENST00000534234 SLC7A6Q92536 515 aa7.54□□□□□ -1.2
COPB1-211ENST00000534234 PTP4A1Q93096 173 aa7.54□□□□□ -1.2
COPB1-211ENST00000534234 HAVCR1Q96D42 359 aa7.54□□□□□ -1.2
COPB1-211ENST00000534234 RSRC1Q96IZ7 334 aaKnown RBP7.54□□□□□ -1.2
COPB1-211ENST00000534234 DCLRE1CQ96SD1 692 aaKnown RBP7.54□□□□□ -1.2
COPB1-211ENST00000534234 GPX7Q96SL4 187 aaPredicted RBP7.54□□□□□ -1.2
COPB1-211ENST00000534234 KRCC1Q9NPI7 259 aaPredicted RBP7.54□□□□□ -1.2
COPB1-211ENST00000534234 VSX1Q9NZR4 365 aaPredicted RBP7.54□□□□□ -1.2
COPB1-211ENST00000534234 ASH2LQ9UBL3 628 aa7.54□□□□□ -1.2
COPB1-211ENST00000534234 PURGQ9UJV8 347 aaKnown RBP7.54□□□□□ -1.2
COPB1-211ENST00000534234 LOC105371242A0A075B767 164 aa7.54□□□□□ -1.2
COPB1-211ENST00000534234 UNC119BA6NIH7 251 aa7.54□□□□□ -1.2
COPB1-211ENST00000534234 RER1O15258 196 aa7.54□□□□□ -1.2
COPB1-211ENST00000534234 RGS9O75916 674 aaPredicted RBP7.54□□□□□ -1.2
COPB1-211ENST00000534234 SBK2P0C263 348 aa7.54□□□□□ -1.2
COPB1-211ENST00000534234 TNFRSF1AP19438 455 aa7.54□□□□□ -1.2
COPB1-211ENST00000534234 KITLGP21583 273 aa7.54□□□□□ -1.2
COPB1-211ENST00000534234 TNFSF4P23510 183 aa7.54□□□□□ -1.2
COPB1-211ENST00000534234 PRDX6P30041 224 aa7.54□□□□□ -1.2
COPB1-211ENST00000534234 CDKN2AP42771 156 aaKnown RBP7.54□□□□□ -1.2
COPB1-211ENST00000534234 CENPAP49450 140 aa7.54□□□□□ -1.2
COPB1-211ENST00000534234 RPS6KA3P51812 740 aa7.54□□□□□ -1.2
COPB1-211ENST00000534234 FXYD6P3P58550 94 aa7.54□□□□□ -1.2
COPB1-211ENST00000534234 DCAF12L2Q5VW00 463 aa7.54□□□□□ -1.2
COPB1-211ENST00000534234 SMARCD3Q6STE5 483 aa7.54□□□□□ -1.2
COPB1-211ENST00000534234 PTCHD4Q6ZW05 846 aa7.54□□□□□ -1.2
COPB1-211ENST00000534234 ADCK1Q86TW2 530 aa7.54□□□□□ -1.2
COPB1-211ENST00000534234 OR2Z1Q8NG97 314 aa7.54□□□□□ -1.2
COPB1-211ENST00000534234 OR1F12Q8NHA8 337 aa7.54□□□□□ -1.2
COPB1-211ENST00000534234 ST7LQ8TDW4 575 aa7.54□□□□□ -1.2
COPB1-211ENST00000534234 PYURFQ96I23 114 aa7.54□□□□□ -1.2
COPB1-211ENST00000534234 SAMD8Q96LT4 415 aa7.54□□□□□ -1.2
COPB1-211ENST00000534234 COG8Q96MW5 612 aa7.54□□□□□ -1.2
COPB1-211ENST00000534234 TSSK2Q96PF2 358 aa7.54□□□□□ -1.2
COPB1-211ENST00000534234 GPA33Q99795 319 aa7.54□□□□□ -1.2
COPB1-211ENST00000534234 TMPRSS13Q9BYE2 586 aa7.54□□□□□ -1.2
COPB1-211ENST00000534234 FAM107BQ9H098 131 aa7.54□□□□□ -1.2
COPB1-211ENST00000534234 POFUT1Q9H488 388 aa7.54□□□□□ -1.2
COPB1-211ENST00000534234 C7orf69Q9H7B7 122 aa7.54□□□□□ -1.2
COPB1-211ENST00000534234 GORASP2Q9H8Y8 452 aa7.54□□□□□ -1.2
COPB1-211ENST00000534234 SRA1Q9HD15 236 aaKnown RBP7.54□□□□□ -1.2
COPB1-211ENST00000534234 DCAF16Q9NXF7 216 aa7.54□□□□□ -1.2
COPB1-211ENST00000534234 NPTNQ9Y639 398 aa7.54□□□□□ -1.2
COPB1-211ENST00000534234 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.53□□□□□ -1.21e-7■■■■□ 26.1
COPB1-211ENST00000534234 OR6C6A6NF89 314 aa7.53□□□□□ -1.2
COPB1-211ENST00000534234 J3QLI3 93 aa7.53□□□□□ -1.2
COPB1-211ENST00000534234 DCTN6O00399 190 aa7.53□□□□□ -1.2
COPB1-211ENST00000534234 SNX3O60493 162 aa7.53□□□□□ -1.2
COPB1-211ENST00000534234 GADD45GO95257 159 aa7.53□□□□□ -1.2
COPB1-211ENST00000534234 TXNDC12O95881 172 aa7.53□□□□□ -1.2
COPB1-211ENST00000534234 DBHP09172 617 aa7.53□□□□□ -1.2
COPB1-211ENST00000534234 RAC2P15153 192 aa7.53□□□□□ -1.2
COPB1-211ENST00000534234 ADRA2CP18825 462 aa7.53□□□□□ -1.2
COPB1-211ENST00000534234 EPHA1P21709 976 aa7.53□□□□□ -1.2
COPB1-211ENST00000534234 CRABP1P29762 137 aa7.53□□□□□ -1.2
COPB1-211ENST00000534234 RBMXP38159 391 aaKnown RBP7.53□□□□□ -1.2
COPB1-211ENST00000534234 SMIM11AP58511 58 aa7.53□□□□□ -1.2
COPB1-211ENST00000534234 LCN2P80188 198 aa7.53□□□□□ -1.2
COPB1-211ENST00000534234 HNRNPA0Q13151 305 aaKnown RBP7.53□□□□□ -1.2
COPB1-211ENST00000534234 KCNMB1Q16558 191 aa7.53□□□□□ -1.2
COPB1-211ENST00000534234 RFX4Q33E94 735 aa7.53□□□□□ -1.2
COPB1-211ENST00000534234 CCDC92Q53HC0 331 aaPredicted RBP7.53□□□□□ -1.2
COPB1-211ENST00000534234 Q6ZR03 302 aa7.53□□□□□ -1.2
COPB1-211ENST00000534234 CPLX4Q7Z7G2 160 aa7.53□□□□□ -1.2
COPB1-211ENST00000534234 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.53□□□□□ -1.2
COPB1-211ENST00000534234 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.53□□□□□ -1.2
COPB1-211ENST00000534234 GJC3Q8NFK1 279 aa7.53□□□□□ -1.2
COPB1-211ENST00000534234 OR5L1Q8NGL2 311 aa7.53□□□□□ -1.2
COPB1-211ENST00000534234 NANPQ8TBE9 248 aa7.53□□□□□ -1.2
COPB1-211ENST00000534234 ZFAND2BQ8WV99 257 aa7.53□□□□□ -1.2
COPB1-211ENST00000534234 DHRS1Q96LJ7 313 aa7.53□□□□□ -1.2
COPB1-211ENST00000534234 ERMAPQ96PL5 475 aaPredicted RBP7.53□□□□□ -1.2
COPB1-211ENST00000534234 FUZQ9BT04 418 aa7.53□□□□□ -1.2
COPB1-211ENST00000534234 TMEM106BQ9NUM4 274 aa7.53□□□□□ -1.2
COPB1-211ENST00000534234 IL19Q9UHD0 177 aa7.53□□□□□ -1.2
COPB1-211ENST00000534234 PCDHB10Q9UN67 800 aa7.53□□□□□ -1.2
COPB1-211ENST00000534234 PPP1R3CQ9UQK1 317 aa7.53□□□□□ -1.2
COPB1-211ENST00000534234 POLR1DQ9Y2S0 133 aa7.53□□□□□ -1.2
COPB1-211ENST00000534234 V9GYQ6 96 aa7.53□□□□□ -1.2
COPB1-211ENST00000534234 J3QW42 95 aa7.52□□□□□ -1.21
COPB1-211ENST00000534234 SURF4O15260 269 aa7.52□□□□□ -1.21
COPB1-211ENST00000534234 ATP8B1O43520 1251 aa7.52□□□□□ -1.21
COPB1-211ENST00000534234 OR10H3O60404 316 aa7.52□□□□□ -1.21
COPB1-211ENST00000534234 PPP1R3DO95685 299 aa7.52□□□□□ -1.21
COPB1-211ENST00000534234 GPANK1O95872 356 aa7.52□□□□□ -1.21
COPB1-211ENST00000534234 IGHV2-70P01814 119 aa7.52□□□□□ -1.21
COPB1-211ENST00000534234 HSD17B1P14061 328 aa7.52□□□□□ -1.21
COPB1-211ENST00000534234 GATA3P23771 443 aa7.52□□□□□ -1.21
COPB1-211ENST00000534234 ZFP36P26651 326 aaKnown RBP7.52□□□□□ -1.21
COPB1-211ENST00000534234 MSX2P35548 267 aaPredicted RBP7.52□□□□□ -1.21
COPB1-211ENST00000534234 RGS6P49758 472 aa7.52□□□□□ -1.21
COPB1-211ENST00000534234 ERFP50548 548 aa7.52□□□□□ -1.21
COPB1-211ENST00000534234 HIST1H3AP68431 136 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms