RNA–Protein interactions for RNA: ENST00000533909.5

CAPN1-227, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-227ENST00000533909 NRBF2Q96F24 287 aa11.5□□□□□ -0.57
CAPN1-227ENST00000533909 PLEKHA8Q96JA3 519 aa11.5□□□□□ -0.57
CAPN1-227ENST00000533909 PITX2Q99697 317 aa11.5□□□□□ -0.57
CAPN1-227ENST00000533909 PIMREGQ9BSJ6 248 aa11.5□□□□□ -0.57
CAPN1-227ENST00000533909 HDHD2Q9H0R4 259 aa11.5□□□□□ -0.57
CAPN1-227ENST00000533909 KCNG2Q9UJ96 466 aa11.5□□□□□ -0.57
CAPN1-227ENST00000533909 CSPG4Q6UVK1 2322 aa11.49□□□□□ -0.57
CAPN1-227ENST00000533909 C2CD3Q4AC94 2353 aa11.49□□□□□ -0.57
CAPN1-227ENST00000533909 IGHV4-30-2A0A087WSY4 118 aa11.49□□□□□ -0.57
CAPN1-227ENST00000533909 TMEM129A0AVI4 362 aa11.49□□□□□ -0.57
CAPN1-227ENST00000533909 OR6C6A6NF89 314 aa11.49□□□□□ -0.57
CAPN1-227ENST00000533909 RER1O15258 196 aa11.49□□□□□ -0.57
CAPN1-227ENST00000533909 TPD52L2O43399 206 aaKnown RBP11.49□□□□□ -0.57
CAPN1-227ENST00000533909 CLPTM1O96005 669 aa11.49□□□□□ -0.57
CAPN1-227ENST00000533909 NAT2P11245 290 aa11.49□□□□□ -0.57
CAPN1-227ENST00000533909 OSMP13725 252 aa11.49□□□□□ -0.57
CAPN1-227ENST00000533909 DAOP14920 347 aa11.49□□□□□ -0.57
CAPN1-227ENST00000533909 ZNF250P15622 560 aa11.49□□□□□ -0.57
CAPN1-227ENST00000533909 PRKACGP22612 351 aa11.49□□□□□ -0.57
CAPN1-227ENST00000533909 FMO3P31513 532 aa11.49□□□□□ -0.57
CAPN1-227ENST00000533909 GRK5P34947 590 aa11.49□□□□□ -0.57
CAPN1-227ENST00000533909 WNT5AP41221 380 aa11.49□□□□□ -0.57
CAPN1-227ENST00000533909 BLVRAP53004 296 aa11.49□□□□□ -0.57
CAPN1-227ENST00000533909 CRMP1Q14194 572 aa11.49□□□□□ -0.57
CAPN1-227ENST00000533909 ATP6AP1Q15904 470 aa11.49□□□□□ -0.57
CAPN1-227ENST00000533909 ELFN2Q5R3F8 820 aa11.49□□□□□ -0.57
CAPN1-227ENST00000533909 CORO6Q6QEF8 472 aa11.49□□□□□ -0.57
CAPN1-227ENST00000533909 HIPK1Q86Z02 1210 aa11.49□□□□□ -0.57
CAPN1-227ENST00000533909 LINC00346Q8IVM7 164 aa11.49□□□□□ -0.57
CAPN1-227ENST00000533909 HS3ST5Q8IZT8 346 aa11.49□□□□□ -0.57
CAPN1-227ENST00000533909 ZCCHC24Q8N2G6 241 aaKnown RBP11.49□□□□□ -0.57
CAPN1-227ENST00000533909 OR51L1Q8NGJ5 315 aa11.49□□□□□ -0.57
CAPN1-227ENST00000533909 DNAJC9Q8WXX5 260 aa11.49□□□□□ -0.57
CAPN1-227ENST00000533909 COG8Q96MW5 612 aa11.49□□□□□ -0.57
CAPN1-227ENST00000533909 SMR3AQ99954 134 aa11.49□□□□□ -0.57
CAPN1-227ENST00000533909 GSX1Q9H4S2 264 aaPredicted RBP11.49□□□□□ -0.57
CAPN1-227ENST00000533909 PAPOLBQ9NRJ5 636 aaKnown RBP11.49□□□□□ -0.57
CAPN1-227ENST00000533909 LHFPL6Q9Y693 200 aa11.49□□□□□ -0.57
CAPN1-227ENST00000533909 RTTNQ86VV8 2226 aa11.49□□□□□ -0.57
CAPN1-227ENST00000533909 ZANQ9Y493 2812 aa11.49□□□□□ -0.57
CAPN1-227ENST00000533909 NIPBLQ6KC79 2804 aaeCLIP11.48□□□□□ -0.57
CAPN1-227ENST00000533909 LOC390937A0A1W2PQ73 354 aa11.48□□□□□ -0.57
CAPN1-227ENST00000533909 TVP23AA6NH52 213 aa11.48□□□□□ -0.57
CAPN1-227ENST00000533909 G3V2T6 193 aa11.48□□□□□ -0.57
CAPN1-227ENST00000533909 NDUFS8O00217 210 aa11.48□□□□□ -0.57
CAPN1-227ENST00000533909 TFP02787 698 aa11.48□□□□□ -0.57
CAPN1-227ENST00000533909 HMGN1P05114 100 aa11.48□□□□□ -0.57
CAPN1-227ENST00000533909 ZNF23P17027 643 aa11.48□□□□□ -0.57
CAPN1-227ENST00000533909 DBPQ10586 325 aaPredicted RBP11.48□□□□□ -0.57
CAPN1-227ENST00000533909 ECH1Q13011 328 aa11.48□□□□□ -0.57
CAPN1-227ENST00000533909 CCNIQ14094 377 aa11.48□□□□□ -0.57
CAPN1-227ENST00000533909 GINS1Q14691 196 aa11.48□□□□□ -0.57
CAPN1-227ENST00000533909 MSMPQ1L6U9 139 aa11.48□□□□□ -0.57
CAPN1-227ENST00000533909 RFPL4BQ6ZWI9 263 aa11.48□□□□□ -0.57
CAPN1-227ENST00000533909 Q71RC1 249 aaPredicted RBP11.48□□□□□ -0.57
CAPN1-227ENST00000533909 ZDHHC13Q8IUH4 622 aa11.48□□□□□ -0.57
CAPN1-227ENST00000533909 MAPK1IP1LQ8NDC0 245 aa11.48□□□□□ -0.57
CAPN1-227ENST00000533909 ZNF540Q8NDQ6 660 aa11.48□□□□□ -0.57
CAPN1-227ENST00000533909 OR5L1Q8NGL2 311 aa11.48□□□□□ -0.57
CAPN1-227ENST00000533909 OR5K1Q8NHB7 308 aa11.48□□□□□ -0.57
CAPN1-227ENST00000533909 SLC25A40Q8TBP6 338 aa11.48□□□□□ -0.57
CAPN1-227ENST00000533909 C10orf105Q8TEF2 133 aa11.48□□□□□ -0.57
CAPN1-227ENST00000533909 IPCEF1Q8WWN9 437 aaPredicted RBP11.48□□□□□ -0.57
CAPN1-227ENST00000533909 DCLRE1CQ96SD1 692 aaKnown RBP11.48□□□□□ -0.57
CAPN1-227ENST00000533909 COQ7Q99807 217 aa11.48□□□□□ -0.57
CAPN1-227ENST00000533909 OR2J1Q9GZK6 312 aa11.48□□□□□ -0.57
CAPN1-227ENST00000533909 HINT3Q9NQE9 182 aaKnown RBP11.48□□□□□ -0.57
CAPN1-227ENST00000533909 CMC2Q9NRP2 79 aa11.48□□□□□ -0.57
CAPN1-227ENST00000533909 MYEF2Q9P2K5 600 aaKnown RBP11.48□□□□□ -0.57
CAPN1-227ENST00000533909 ATPIF1Q9UII2 106 aa11.48□□□□□ -0.57
CAPN1-227ENST00000533909 NSD1Q96L73 2696 aaPredicted RBP11.47□□□□□ -0.57
CAPN1-227ENST00000533909 HIVEP2P31629 2446 aa11.47□□□□□ -0.57
CAPN1-227ENST00000533909 H3BSA7 217 aa11.47□□□□□ -0.57
CAPN1-227ENST00000533909 TIMM8AO60220 97 aaPredicted RBP11.47□□□□□ -0.57
CAPN1-227ENST00000533909 GYPBP06028 91 aa11.47□□□□□ -0.57
CAPN1-227ENST00000533909 SPARCP09486 303 aa11.47□□□□□ -0.57
CAPN1-227ENST00000533909 SPI1P17947 270 aa11.47□□□□□ -0.57
CAPN1-227ENST00000533909 TUBG1P23258 451 aa11.47□□□□□ -0.57
CAPN1-227ENST00000533909 RGS6P49758 472 aa11.47□□□□□ -0.57
CAPN1-227ENST00000533909 SLC25A1P53007 311 aa11.47□□□□□ -0.57
CAPN1-227ENST00000533909 TAF13Q15543 124 aa11.47□□□□□ -0.57
CAPN1-227ENST00000533909 PCGF3Q3KNV8 242 aa11.47□□□□□ -0.57
CAPN1-227ENST00000533909 CCDC92Q53HC0 331 aaPredicted RBP11.47□□□□□ -0.57
CAPN1-227ENST00000533909 ZMAT1Q5H9K5 638 aa11.47□□□□□ -0.57
CAPN1-227ENST00000533909 SLC18B1Q6NT16 456 aa11.47□□□□□ -0.57
CAPN1-227ENST00000533909 DNM1P46Q6ZS02 220 aa11.47□□□□□ -0.57
CAPN1-227ENST00000533909 ASRGL1Q7L266 308 aa11.47□□□□□ -0.57
CAPN1-227ENST00000533909 C10orf67Q8IYJ2 551 aa11.47□□□□□ -0.57
CAPN1-227ENST00000533909 KLF14Q8TD94 323 aaPredicted RBP11.47□□□□□ -0.57
CAPN1-227ENST00000533909 UBASH3BQ8TF42 649 aa11.47□□□□□ -0.57
CAPN1-227ENST00000533909 SLC7A6Q92536 515 aa11.47□□□□□ -0.57
CAPN1-227ENST00000533909 UTP4Q969X6 686 aaKnown RBP11.47□□□□□ -0.57
CAPN1-227ENST00000533909 RBM4Q9BWF3 364 aaKnown RBP11.47□□□□□ -0.57
CAPN1-227ENST00000533909 PRRG3Q9BZD7 231 aa11.47□□□□□ -0.57
CAPN1-227ENST00000533909 TUBG2Q9NRH3 451 aa11.47□□□□□ -0.57
CAPN1-227ENST00000533909 CYSLTR2Q9NS75 346 aa11.47□□□□□ -0.57
CAPN1-227ENST00000533909 KRT84Q9NSB2 600 aa11.47□□□□□ -0.57
CAPN1-227ENST00000533909 DECR2Q9NUI1 292 aa11.47□□□□□ -0.57
CAPN1-227ENST00000533909 TBCCD1Q9NVR7 557 aa11.47□□□□□ -0.57
CAPN1-227ENST00000533909 CYB5R1Q9UHQ9 305 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms